RNA–Protein interactions for RNA: ENST00000458188.2

CLTCL1-204, Transcript of clathrin heavy chain like 1, humanhuman

TSL 3

Gene CLTCL1, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-204ENST00000458188 EIF4G2P78344 907 aaKnown RBP eCLIP12.23□□□□□ -0.45
CLTCL1-204ENST00000458188 SETD1AO15047 1707 aaKnown RBP12.23□□□□□ -0.45
CLTCL1-204ENST00000458188 CENPJQ9HC77 1338 aaPredicted RBP12.22□□□□□ -0.45
CLTCL1-204ENST00000458188 SIRT1Q96EB6 747 aa12.22□□□□□ -0.45
CLTCL1-204ENST00000458188 STRCP1A6NGW2 1772 aa12.2□□□□□ -0.46
CLTCL1-204ENST00000458188 TECPR2O15040 1411 aa12.2□□□□□ -0.46
CLTCL1-204ENST00000458188 LAMC1P11047 1609 aa12.19□□□□□ -0.46
CLTCL1-204ENST00000458188 TESK2Q96S53 571 aa12.19□□□□□ -0.46
CLTCL1-204ENST00000458188 POLR3GLQ9BT43 218 aa12.19□□□□□ -0.46
CLTCL1-204ENST00000458188 CABP2Q9NPB3 220 aa12.19□□□□□ -0.46
CLTCL1-204ENST00000458188 EIF3AQ14152 1382 aaKnown RBP12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 KIAA1210Q9ULL0 1709 aa12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 C11orf95C9JLR9 678 aaPredicted RBP12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 CDK19Q9BWU1 502 aa12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 C19orf44Q9H6X5 657 aa12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 PTCH1Q13635 1447 aa12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 FAM135BQ49AJ0 1406 aa12.18□□□□□ -0.46
CLTCL1-204ENST00000458188 CHD2O14647 1828 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-204ENST00000458188 UPF1Q92900 1129 aaKnown RBP eCLIP12.17□□□□□ -0.46
CLTCL1-204ENST00000458188 NWD1Q149M9 1564 aa12.17□□□□□ -0.46
CLTCL1-204ENST00000458188 XRN1Q8IZH2 1706 aaKnown RBP12.17□□□□□ -0.46
CLTCL1-204ENST00000458188 DLC1Q96QB1 1528 aa12.16□□□□□ -0.46
CLTCL1-204ENST00000458188 NKTRP30414 1462 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-204ENST00000458188 WASLO00401 505 aaPredicted RBP12.16□□□□□ -0.46
CLTCL1-204ENST00000458188 ATF3P18847 181 aa12.16□□□□□ -0.46
CLTCL1-204ENST00000458188 SRPK2P78362 688 aaKnown RBP12.16□□□□□ -0.46
CLTCL1-204ENST00000458188 MSH6P52701 1360 aa12.15□□□□□ -0.46
CLTCL1-204ENST00000458188 TMF1P82094 1093 aa12.14□□□□□ -0.47
CLTCL1-204ENST00000458188 EVC2Q86UK5 1308 aa12.13□□□□□ -0.47
CLTCL1-204ENST00000458188 ORAI2Q96SN7 254 aa12.13□□□□□ -0.47
CLTCL1-204ENST00000458188 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.13□□□□□ -0.47
CLTCL1-204ENST00000458188 ADGRL3Q9HAR2 1447 aa12.12□□□□□ -0.47
CLTCL1-204ENST00000458188 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
CLTCL1-204ENST00000458188 PMFBP1Q8TBY8 1022 aa12.12□□□□□ -0.47
CLTCL1-204ENST00000458188 NUDT16Q96DE0 195 aaKnown RBP12.12□□□□□ -0.47
CLTCL1-204ENST00000458188 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
CLTCL1-204ENST00000458188 PRR36Q9H6K5 1346 aa12.11□□□□□ -0.47
CLTCL1-204ENST00000458188 ARHGEF28Q8N1W1 1705 aaKnown RBP12.11□□□□□ -0.47
CLTCL1-204ENST00000458188 ESCO1Q5FWF5 840 aa12.11□□□□□ -0.47
CLTCL1-204ENST00000458188 ZNF772Q68DY9 489 aaPredicted RBP12.11□□□□□ -0.47
CLTCL1-204ENST00000458188 TMC1Q8TDI8 760 aa12.11□□□□□ -0.47
CLTCL1-204ENST00000458188 NCOA3Q9Y6Q9 1424 aa12.11□□□□□ -0.47
CLTCL1-204ENST00000458188 XIRP1Q702N8 1843 aaKnown RBP12.1□□□□□ -0.47
CLTCL1-204ENST00000458188 MEX3CQ5U5Q3 659 aaKnown RBP12.1□□□□□ -0.47
CLTCL1-204ENST00000458188 DDX17Q92841 729 aaKnown RBP12.1□□□□□ -0.47
CLTCL1-204ENST00000458188 CABP1Q9NZU7 370 aa12.1□□□□□ -0.47
CLTCL1-204ENST00000458188 KNDC1Q76NI1 1749 aa12.1□□□□□ -0.47
CLTCL1-204ENST00000458188 SLC12A5Q9H2X9 1139 aa12.09□□□□□ -0.47
CLTCL1-204ENST00000458188 JCADQ9P266 1359 aa12.08□□□□□ -0.48
CLTCL1-204ENST00000458188 TULP4Q9NRJ4 1543 aa12.08□□□□□ -0.48
CLTCL1-204ENST00000458188 ROBO1Q9Y6N7 1651 aa12.08□□□□□ -0.48
CLTCL1-204ENST00000458188 KIF7Q2M1P5 1343 aa12.08□□□□□ -0.48
CLTCL1-204ENST00000458188 QRICH2Q9H0J4 1663 aa12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 RXRBP28702 533 aa12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 XPCQ01831 940 aaPredicted RBP12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 MST1RQ04912 1400 aa12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 CCDC61Q9Y6R9 512 aa12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 C1orf167Q5SNV9 1468 aa12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 WASHC2AQ641Q2 1341 aa12.07□□□□□ -0.48
CLTCL1-204ENST00000458188 SBNO2Q9Y2G9 1366 aa12.06□□□□□ -0.48
CLTCL1-204ENST00000458188 NALCNQ8IZF0 1738 aa12.06□□□□□ -0.48
CLTCL1-204ENST00000458188 ZNF316A6NFI3 1004 aaPredicted RBP12.06□□□□□ -0.48
CLTCL1-204ENST00000458188 FOXO3O43524 673 aa12.06□□□□□ -0.48
CLTCL1-204ENST00000458188 BRINP3Q76B58 766 aa12.06□□□□□ -0.48
CLTCL1-204ENST00000458188 PHF8Q9UPP1 1060 aa12.06□□□□□ -0.48
CLTCL1-204ENST00000458188 SLC24A1O60721 1099 aa12.05□□□□□ -0.48
CLTCL1-204ENST00000458188 CDCA8Q53HL2 280 aa12.05□□□□□ -0.48
CLTCL1-204ENST00000458188 NGDNQ8NEJ9 315 aaKnown RBP12.05□□□□□ -0.48
CLTCL1-204ENST00000458188 PHLPP1O60346 1717 aa12.05□□□□□ -0.48
CLTCL1-204ENST00000458188 PLEKHG5O94827 1062 aa12.04□□□□□ -0.48
CLTCL1-204ENST00000458188 ACEP12821 1306 aa12.04□□□□□ -0.48
CLTCL1-204ENST00000458188 SPATA31A6Q5VVP1 1343 aa12.04□□□□□ -0.48
CLTCL1-204ENST00000458188 CCDC7Q96M83 1385 aa12.04□□□□□ -0.48
CLTCL1-204ENST00000458188 DCCP43146 1447 aa12.03□□□□□ -0.48
CLTCL1-204ENST00000458188 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
CLTCL1-204ENST00000458188 PSME1Q06323 249 aa12.03□□□□□ -0.48
CLTCL1-204ENST00000458188 ATP7BP35670 1465 aa12.02□□□□□ -0.48
CLTCL1-204ENST00000458188 CDC42BPGQ6DT37 1551 aa12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 PLEKHG3A1L390 1219 aa12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 DDX10Q13206 875 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 CNGB1Q14028 1251 aaPredicted RBP12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 PUS7Q96PZ0 661 aaKnown RBP12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 PANK3Q9H999 370 aa12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 ATAD2Q6PL18 1390 aa12.02□□□□□ -0.49
CLTCL1-204ENST00000458188 ADGRB2O60241 1585 aa12.01□□□□□ -0.49
CLTCL1-204ENST00000458188 KRT28Q7Z3Y7 464 aa12.01□□□□□ -0.49
CLTCL1-204ENST00000458188 ANKARQ7Z5J8 1434 aa12.01□□□□□ -0.49
CLTCL1-204ENST00000458188 PAK3O75914 559 aaPredicted RBP12□□□□□ -0.49
CLTCL1-204ENST00000458188 NUTM2GQ5VZR2 741 aa11.99□□□□□ -0.49
CLTCL1-204ENST00000458188 LMOD2Q6P5Q4 547 aa11.99□□□□□ -0.49
CLTCL1-204ENST00000458188 HDGFL2Q7Z4V5 671 aaPredicted RBP11.99□□□□□ -0.49
CLTCL1-204ENST00000458188 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.99□□□□□ -0.49
CLTCL1-204ENST00000458188 CARD14Q9BXL6 1004 aa11.99□□□□□ -0.49
CLTCL1-204ENST00000458188 USP32Q8NFA0 1604 aa11.99□□□□□ -0.49
CLTCL1-204ENST00000458188 FMN2Q9NZ56 1722 aa11.98□□□□□ -0.49
CLTCL1-204ENST00000458188 TERF2IPQ9NYB0 399 aa11.98□□□□□ -0.49
CLTCL1-204ENST00000458188 CDK12Q9NYV4 1490 aaPredicted RBP11.97□□□□□ -0.49
CLTCL1-204ENST00000458188 ZRANB1Q9UGI0 708 aa11.97□□□□□ -0.49
CLTCL1-204ENST00000458188 A0A1W2PP64 1363 aa11.96□□□□□ -0.49
CLTCL1-204ENST00000458188 KTN1Q86UP2 1357 aaKnown RBP11.96□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms