RNA–Protein interactions for RNA: ENST00000457839.6

MBD1-210, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene MBD1, Length 2,473 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-210ENST00000457839 UBR1Q8IWV7 1749 aa22■■□□□ 1.11
MBD1-210ENST00000457839 NSD3Q9BZ95 1437 aa22■■□□□ 1.11
MBD1-210ENST00000457839 FER1L4A9Z1Z3 1794 aa21.99■■□□□ 1.11
MBD1-210ENST00000457839 NRXN3Q9Y4C0 1643 aa21.99■■□□□ 1.11
MBD1-210ENST00000457839 FKBP8Q14318 412 aa21.99■■□□□ 1.11
MBD1-210ENST00000457839 TXNDC2Q86VQ3 553 aa21.98■■□□□ 1.11
MBD1-210ENST00000457839 HDGFP51858 240 aaKnown RBP21.98■■□□□ 1.11
MBD1-210ENST00000457839 TNNT2P45379 298 aaPredicted RBP21.97■■□□□ 1.11
MBD1-210ENST00000457839 SETD1AO15047 1707 aaKnown RBP21.96■■□□□ 1.11
MBD1-210ENST00000457839 CDK19Q9BWU1 502 aa21.96■■□□□ 1.11
MBD1-210ENST00000457839 NPC1L1Q9UHC9 1359 aa21.95■■□□□ 1.11
MBD1-210ENST00000457839 NLRP1Q9C000 1473 aa21.94■■□□□ 1.1
MBD1-210ENST00000457839 SLC26A8Q96RN1 970 aa21.94■■□□□ 1.1
MBD1-210ENST00000457839 ADAMTS8Q9UP79 889 aa21.92■■□□□ 1.1
MBD1-210ENST00000457839 ABCC11Q96J66 1382 aa21.92■■□□□ 1.1
MBD1-210ENST00000457839 PUS7Q96PZ0 661 aaKnown RBP21.92■■□□□ 1.1
MBD1-210ENST00000457839 IRX6P78412 446 aaPredicted RBP21.9■■□□□ 1.1
MBD1-210ENST00000457839 MORC1Q86VD1 984 aa21.9■■□□□ 1.1
MBD1-210ENST00000457839 ANKRD36BQ8N2N9 1353 aa21.9■■□□□ 1.1
MBD1-210ENST00000457839 A0A1W2PP64 1363 aa21.89■■□□□ 1.1
MBD1-210ENST00000457839 ADAMTS13Q76LX8 1427 aa21.88■■□□□ 1.09
MBD1-210ENST00000457839 NEFLP07196 543 aa21.88■■□□□ 1.09
MBD1-210ENST00000457839 CABP1Q9NZU7 370 aa21.88■■□□□ 1.09
MBD1-210ENST00000457839 EID1Q9Y6B2 187 aa21.88■■□□□ 1.09
MBD1-210ENST00000457839 CGNL1Q0VF96 1302 aa21.87■■□□□ 1.09
MBD1-210ENST00000457839 WDR43Q15061 677 aaKnown RBP eCLIP21.86■■□□□ 1.09
MBD1-210ENST00000457839 DLC1Q96QB1 1528 aa21.86■■□□□ 1.09
MBD1-210ENST00000457839 ATAD2Q6PL18 1390 aa21.86■■□□□ 1.09
MBD1-210ENST00000457839 PLEKHG1Q9ULL1 1385 aa21.85■■□□□ 1.09
MBD1-210ENST00000457839 THEMISQ8N1K5 641 aaPredicted RBP21.85■■□□□ 1.09
MBD1-210ENST00000457839 NCKAP5LQ9HCH0 1330 aa21.84■■□□□ 1.09
MBD1-210ENST00000457839 ROBO2Q9HCK4 1378 aa21.84■■□□□ 1.09
MBD1-210ENST00000457839 RIMS1Q86UR5 1692 aaKnown RBP21.83■■□□□ 1.09
MBD1-210ENST00000457839 GGNBP2Q9H3C7 697 aa21.83■■□□□ 1.08
MBD1-210ENST00000457839 CD163L1Q9NR16 1453 aa21.82■■□□□ 1.08
MBD1-210ENST00000457839 WASLO00401 505 aaPredicted RBP21.82■■□□□ 1.08
MBD1-210ENST00000457839 TERF2IPQ9NYB0 399 aa21.82■■□□□ 1.08
MBD1-210ENST00000457839 BLMP54132 1417 aaPredicted RBP21.81■■□□□ 1.08
MBD1-210ENST00000457839 CCDC146Q8IYE0 955 aa21.81■■□□□ 1.08
MBD1-210ENST00000457839 NUDCQ9Y266 331 aa21.81■■□□□ 1.08
MBD1-210ENST00000457839 SMG6Q86US8 1419 aaKnown RBP21.79■■□□□ 1.08
MBD1-210ENST00000457839 NINLQ9Y2I6 1382 aa21.79■■□□□ 1.08
MBD1-210ENST00000457839 SLIT1O75093 1534 aa21.79■■□□□ 1.08
MBD1-210ENST00000457839 ARHGAP23Q9P227 1491 aa21.79■■□□□ 1.08
MBD1-210ENST00000457839 NUTM2FA1L443 756 aa21.79■■□□□ 1.08
MBD1-210ENST00000457839 CDCA7LQ96GN5 454 aa21.79■■□□□ 1.08
MBD1-210ENST00000457839 PTPRUQ92729 1446 aa21.78■■□□□ 1.08
MBD1-210ENST00000457839 MTHFSP49914 203 aa21.78■■□□□ 1.08
MBD1-210ENST00000457839 TECPR2O15040 1411 aa21.78■■□□□ 1.08
MBD1-210ENST00000457839 HDGFL2Q7Z4V5 671 aaPredicted RBP21.78■■□□□ 1.08
MBD1-210ENST00000457839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.78■■□□□ 1.08
MBD1-210ENST00000457839 FYB1O15117 783 aa21.77■■□□□ 1.08
MBD1-210ENST00000457839 AMOTL2Q9Y2J4 779 aa21.77■■□□□ 1.07
MBD1-210ENST00000457839 FAM135BQ49AJ0 1406 aa21.76■■□□□ 1.07
MBD1-210ENST00000457839 MED14O60244 1454 aa21.75■■□□□ 1.07
MBD1-210ENST00000457839 USP32Q8NFA0 1604 aa21.75■■□□□ 1.07
MBD1-210ENST00000457839 NUDT16Q96DE0 195 aaKnown RBP21.75■■□□□ 1.07
MBD1-210ENST00000457839 SIRT1Q96EB6 747 aa21.74■■□□□ 1.07
MBD1-210ENST00000457839 CPS1P31327 1500 aa21.74■■□□□ 1.07
MBD1-210ENST00000457839 CEP170BQ9Y4F5 1589 aaPredicted RBP21.73■■□□□ 1.07
MBD1-210ENST00000457839 KNDC1Q76NI1 1749 aa21.73■■□□□ 1.07
MBD1-210ENST00000457839 TBX22Q9Y458 520 aa21.72■■□□□ 1.07
MBD1-210ENST00000457839 PPIP5K1Q6PFW1 1433 aa21.72■■□□□ 1.07
MBD1-210ENST00000457839 PRR36Q9H6K5 1346 aa21.72■■□□□ 1.07
MBD1-210ENST00000457839 POLR3AO14802 1390 aaPredicted RBP21.72■■□□□ 1.07
MBD1-210ENST00000457839 FBLN1P23142 703 aa21.71■■□□□ 1.07
MBD1-210ENST00000457839 INSRP06213 1382 aa21.71■■□□□ 1.07
MBD1-210ENST00000457839 ADAMTSL3P82987 1691 aa21.71■■□□□ 1.07
MBD1-210ENST00000457839 NSD2O96028 1365 aa21.71■■□□□ 1.07
MBD1-210ENST00000457839 APAF1O14727 1248 aa21.7■■□□□ 1.06
MBD1-210ENST00000457839 CCDC61Q9Y6R9 512 aa21.7■■□□□ 1.06
MBD1-210ENST00000457839 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.69■■□□□ 1.06
MBD1-210ENST00000457839 ZRANB1Q9UGI0 708 aa21.66■■□□□ 1.06
MBD1-210ENST00000457839 KCNA6P17658 529 aa21.66■■□□□ 1.06
MBD1-210ENST00000457839 ATP7BP35670 1465 aa21.66■■□□□ 1.06
MBD1-210ENST00000457839 ANKLE2Q86XL3 938 aa21.65■■□□□ 1.06
MBD1-210ENST00000457839 PDE3BQ13370 1112 aa21.65■■□□□ 1.06
MBD1-210ENST00000457839 NME9Q86XW9 330 aa21.65■■□□□ 1.06
MBD1-210ENST00000457839 CFAP53Q96M91 514 aa21.64■■□□□ 1.05
MBD1-210ENST00000457839 CPSF1Q10570 1443 aaKnown RBP21.64■■□□□ 1.05
MBD1-210ENST00000457839 RBM33Q96EV2 1170 aaKnown RBP21.64■■□□□ 1.05
MBD1-210ENST00000457839 SHPRHQ149N8 1683 aa21.63■■□□□ 1.05
MBD1-210ENST00000457839 PPM1GO15355 546 aaPredicted RBP21.62■■□□□ 1.05
MBD1-210ENST00000457839 NEUROD2Q15784 382 aa21.61■■□□□ 1.05
MBD1-210ENST00000457839 RRP7AQ9Y3A4 280 aaKnown RBP21.61■■□□□ 1.05
MBD1-210ENST00000457839 U2AF1L5P0DN76 240 aaPredicted RBP21.6■■□□□ 1.05
MBD1-210ENST00000457839 U2AF1Q01081 240 aaKnown RBP eCLIP21.6■■□□□ 1.05
MBD1-210ENST00000457839 ZNF521Q96K83 1311 aa21.59■■□□□ 1.05
MBD1-210ENST00000457839 PMFBP1Q8TBY8 1022 aa21.59■■□□□ 1.05
MBD1-210ENST00000457839 RCAN3Q9UKA8 241 aa21.59■■□□□ 1.05
MBD1-210ENST00000457839 SETD1BQ9UPS6 1966 aaKnown RBP21.58■■□□□ 1.05
MBD1-210ENST00000457839 ACEP12821 1306 aa21.58■■□□□ 1.05
MBD1-210ENST00000457839 EDC4Q6P2E9 1401 aaKnown RBP21.58■■□□□ 1.05
MBD1-210ENST00000457839 U2SURPO15042 1029 aaKnown RBP21.58■■□□□ 1.05
MBD1-210ENST00000457839 SPINK5Q9NQ38 1064 aaPredicted RBP21.58■■□□□ 1.05
MBD1-210ENST00000457839 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
MBD1-210ENST00000457839 CDC42BPGQ6DT37 1551 aa21.57■■□□□ 1.04
MBD1-210ENST00000457839 KIF20BQ96Q89 1820 aa21.57■■□□□ 1.04
MBD1-210ENST00000457839 PTCH1Q13635 1447 aa21.57■■□□□ 1.04
MBD1-210ENST00000457839 GOLGA2Q08379 1002 aa21.56■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms