RNA–Protein interactions for RNA: ENST00000457599.6

ARID1A-205, Transcript of AT-rich interaction domain 1A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ARID1A, Length 6,268 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARID1A-205ENST00000457599 MINK1Q8N4C8 1332 aaPredicted RBP20.32■□□□□ 0.84
ARID1A-205ENST00000457599 NEUROD6Q96NK8 337 aa20.31■□□□□ 0.84
ARID1A-205ENST00000457599 RUFY1Q96T51 708 aa20.31■□□□□ 0.84
ARID1A-205ENST00000457599 CHMP5Q9NZZ3 219 aa20.31■□□□□ 0.84
ARID1A-205ENST00000457599 DDX19BQ9UMR2 479 aa20.31■□□□□ 0.84
ARID1A-205ENST00000457599 RSPH4AQ5TD94 716 aa20.31■□□□□ 0.84
ARID1A-205ENST00000457599 AIMP1Q12904 312 aaKnown RBP20.31■□□□□ 0.84
ARID1A-205ENST00000457599 SF3B2Q13435 895 aaKnown RBP20.31■□□□□ 0.84
ARID1A-205ENST00000457599 SASS6Q6UVJ0 657 aa20.31■□□□□ 0.84
ARID1A-205ENST00000457599 G3BP1Q13283 466 aaKnown RBP eCLIP20.3■□□□□ 0.849e-7■■■□□ 18
ARID1A-205ENST00000457599 KIF21BO75037 1637 aa20.3■□□□□ 0.84
ARID1A-205ENST00000457599 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.3■□□□□ 0.845e-8■■■□□ 17.8
ARID1A-205ENST00000457599 TTLL5Q6EMB2 1281 aa20.29■□□□□ 0.84
ARID1A-205ENST00000457599 ROCK1Q13464 1354 aa20.29■□□□□ 0.84
ARID1A-205ENST00000457599 OFD1O75665 1012 aa20.29■□□□□ 0.84
ARID1A-205ENST00000457599 USP47Q96K76 1375 aa20.29■□□□□ 0.84
ARID1A-205ENST00000457599 WASHC4Q2M389 1173 aa20.29■□□□□ 0.84
ARID1A-205ENST00000457599 EVC2Q86UK5 1308 aa20.28■□□□□ 0.84
ARID1A-205ENST00000457599 FKBP5Q13451 457 aaPredicted RBP20.27■□□□□ 0.84
ARID1A-205ENST00000457599 AK7Q96M32 723 aa20.27■□□□□ 0.84
ARID1A-205ENST00000457599 PRKRIP1Q9H875 184 aaPredicted RBP20.27■□□□□ 0.84
ARID1A-205ENST00000457599 IFT57Q9NWB7 429 aa20.27■□□□□ 0.84
ARID1A-205ENST00000457599 SMC3Q9UQE7 1217 aa20.27■□□□□ 0.84
ARID1A-205ENST00000457599 INTS3Q68E01 1043 aaKnown RBP20.27■□□□□ 0.83
ARID1A-205ENST00000457599 DDX58O95786 925 aaKnown RBP20.26■□□□□ 0.83
ARID1A-205ENST00000457599 DZIP1LQ8IYY4 767 aaKnown RBP20.26■□□□□ 0.83
ARID1A-205ENST00000457599 SAFBQ15424 915 aaKnown RBP eCLIP20.26■□□□□ 0.83
ARID1A-205ENST00000457599 APAF1O14727 1248 aa20.25■□□□□ 0.83
ARID1A-205ENST00000457599 FAM43AQ8N2R8 423 aa20.25■□□□□ 0.83
ARID1A-205ENST00000457599 PDILTQ8N807 584 aa20.25■□□□□ 0.83
ARID1A-205ENST00000457599 RNF20Q5VTR2 975 aa20.25■□□□□ 0.83
ARID1A-205ENST00000457599 NUTM2GQ5VZR2 741 aa20.24■□□□□ 0.83
ARID1A-205ENST00000457599 MNS1Q8NEH6 495 aa20.23■□□□□ 0.83
ARID1A-205ENST00000457599 ARGLU1Q9NWB6 273 aaPredicted RBP20.23■□□□□ 0.83
ARID1A-205ENST00000457599 ZNF644Q9H582 1327 aaPredicted RBP20.22■□□□□ 0.83
ARID1A-205ENST00000457599 RIPK4P57078 832 aa20.22■□□□□ 0.83
ARID1A-205ENST00000457599 RIC3Q7Z5B4 369 aa20.22■□□□□ 0.83
ARID1A-205ENST00000457599 RALYLQ86SE5 291 aaKnown RBP20.22■□□□□ 0.83
ARID1A-205ENST00000457599 WWC2Q6AWC2 1192 aa20.22■□□□□ 0.83
ARID1A-205ENST00000457599 ATP2B1P20020 1258 aa20.22■□□□□ 0.83
ARID1A-205ENST00000457599 CCDC39Q9UFE4 941 aa20.22■□□□□ 0.83
ARID1A-205ENST00000457599 NUCB2P80303 420 aa20.22■□□□□ 0.83
ARID1A-205ENST00000457599 NOM1Q5C9Z4 860 aaKnown RBP20.21■□□□□ 0.83
ARID1A-205ENST00000457599 GAPVD1Q14C86 1478 aa20.21■□□□□ 0.83
ARID1A-205ENST00000457599 DIAPH1O60610 1272 aaKnown RBP20.21■□□□□ 0.83
ARID1A-205ENST00000457599 CDR1P51861 262 aa20.2■□□□□ 0.82
ARID1A-205ENST00000457599 API5Q9BZZ5 524 aaKnown RBP20.2■□□□□ 0.82
ARID1A-205ENST00000457599 ACBD3Q9H3P7 528 aa20.2■□□□□ 0.82
ARID1A-205ENST00000457599 CAGE1Q8TC20 777 aa20.19■□□□□ 0.82
ARID1A-205ENST00000457599 C22orf23Q9BZE7 217 aa20.19■□□□□ 0.82
ARID1A-205ENST00000457599 IBSPP21815 317 aaPredicted RBP20.19■□□□□ 0.82
ARID1A-205ENST00000457599 CCDC73Q6ZRK6 1079 aa20.18■□□□□ 0.82
ARID1A-205ENST00000457599 FGD6Q6ZV73 1430 aa20.18■□□□□ 0.82
ARID1A-205ENST00000457599 ATP2B2Q01814 1243 aa20.17■□□□□ 0.82
ARID1A-205ENST00000457599 MAP7D2Q96T17 732 aa20.17■□□□□ 0.82
ARID1A-205ENST00000457599 NLRP2Q9NX02 1062 aa20.17■□□□□ 0.82
ARID1A-205ENST00000457599 ATF3P18847 181 aa20.17■□□□□ 0.82
ARID1A-205ENST00000457599 RAPGEF4Q8WZA2 1011 aa20.17■□□□□ 0.82
ARID1A-205ENST00000457599 CCDC173Q0VFZ6 552 aa20.17■□□□□ 0.82
ARID1A-205ENST00000457599 OLFM4Q6UX06 510 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 BRMS1Q9HCU9 246 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 TSPYL4Q9UJ04 414 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 STK11IPQ8N1F8 1099 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 RUNDC1Q96C34 613 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 SYNJ1O43426 1573 aa20.16■□□□□ 0.82
ARID1A-205ENST00000457599 LNPKQ9C0E8 428 aa20.15■□□□□ 0.82
ARID1A-205ENST00000457599 PTPRGP23470 1445 aa20.15■□□□□ 0.82
ARID1A-205ENST00000457599 HMOX1P09601 288 aa20.15■□□□□ 0.82
ARID1A-205ENST00000457599 NFKBIBQ15653 356 aa20.15■□□□□ 0.82
ARID1A-205ENST00000457599 NINLQ9Y2I6 1382 aa20.15■□□□□ 0.82
ARID1A-205ENST00000457599 NASPP49321 788 aaPredicted RBP20.15■□□□□ 0.82
ARID1A-205ENST00000457599 LRRC9Q6ZRR7 1453 aa20.14■□□□□ 0.82
ARID1A-205ENST00000457599 ARAP1Q96P48 1450 aa20.14■□□□□ 0.81
ARID1A-205ENST00000457599 ERC2O15083 957 aa20.14■□□□□ 0.81
ARID1A-205ENST00000457599 BRPF1P55201 1214 aaPredicted RBP20.14■□□□□ 0.81
ARID1A-205ENST00000457599 NAT10Q9H0A0 1025 aaKnown RBP20.13■□□□□ 0.81
ARID1A-205ENST00000457599 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
ARID1A-205ENST00000457599 PLCD4Q9BRC7 762 aa20.13■□□□□ 0.81
ARID1A-205ENST00000457599 NEFHP12036 1026 aa20.12■□□□□ 0.81
ARID1A-205ENST00000457599 CDC45O75419 566 aa20.12■□□□□ 0.81
ARID1A-205ENST00000457599 MYOM3Q5VTT5 1437 aa20.12■□□□□ 0.81
ARID1A-205ENST00000457599 AQRO60306 1485 aaKnown RBP eCLIP20.12■□□□□ 0.816e-7■■■■■ 35.2
ARID1A-205ENST00000457599 ANKRD62A6NC57 917 aa20.12■□□□□ 0.81
ARID1A-205ENST00000457599 HSP90B2PQ58FF3 399 aa20.11■□□□□ 0.81
ARID1A-205ENST00000457599 CDK5RAP3Q96JB5 506 aa20.11■□□□□ 0.81
ARID1A-205ENST00000457599 KRT18P05783 430 aaKnown RBP20.11■□□□□ 0.81
ARID1A-205ENST00000457599 PODXL2Q9NZ53 605 aa20.11■□□□□ 0.81
ARID1A-205ENST00000457599 VGFO15240 615 aaPredicted RBP20.11■□□□□ 0.81
ARID1A-205ENST00000457599 DHX37Q8IY37 1157 aaKnown RBP20.1■□□□□ 0.81
ARID1A-205ENST00000457599 PANK1Q8TE04 598 aa20.1■□□□□ 0.81
ARID1A-205ENST00000457599 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
ARID1A-205ENST00000457599 XBP1P17861 261 aa20.1■□□□□ 0.81
ARID1A-205ENST00000457599 SDF4Q9BRK5 362 aa20.1■□□□□ 0.81
ARID1A-205ENST00000457599 MRE11P49959 708 aa20.1■□□□□ 0.81
ARID1A-205ENST00000457599 RDXP35241 583 aaKnown RBP20.1■□□□□ 0.81
ARID1A-205ENST00000457599 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.1■□□□□ 0.81
ARID1A-205ENST00000457599 DNAJC2Q99543 621 aaKnown RBP20.09■□□□□ 0.81
ARID1A-205ENST00000457599 SYCP1Q15431 976 aa20.09■□□□□ 0.81
ARID1A-205ENST00000457599 FMNL2Q96PY5 1086 aa20.09■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms