RNA–Protein interactions for RNA: ENST00000457435.1

LINC01546-201, Transcript of long intergenic non-protein coding RNA 1546, humanhuman

TSL 2 BASIC

Gene LINC01546, Length 674 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546-201ENST00000457435 KDM4AO75164 1064 aa9.01□□□□□ -0.97
LINC01546-201ENST00000457435 MDM2Q00987 491 aaPredicted RBP9.01□□□□□ -0.97
LINC01546-201ENST00000457435 C11orf95C9JLR9 678 aaPredicted RBP9□□□□□ -0.97
LINC01546-201ENST00000457435 CD46P15529 392 aa9□□□□□ -0.97
LINC01546-201ENST00000457435 MAP2K5Q13163 448 aa9□□□□□ -0.97
LINC01546-201ENST00000457435 CRIPAKQ8N1N5 446 aa9□□□□□ -0.97
LINC01546-201ENST00000457435 CCDC24Q8N4L8 307 aa9□□□□□ -0.97
LINC01546-201ENST00000457435 USB1Q9BQ65 265 aaKnown RBP9□□□□□ -0.97
LINC01546-201ENST00000457435 IRF6O14896 467 aa8.99□□□□□ -0.97
LINC01546-201ENST00000457435 SLC24A1O60721 1099 aa8.99□□□□□ -0.97
LINC01546-201ENST00000457435 AVPP01185 164 aa8.99□□□□□ -0.97
LINC01546-201ENST00000457435 TRIM32Q13049 653 aa8.99□□□□□ -0.97
LINC01546-201ENST00000457435 GMPR2Q9P2T1 348 aaKnown RBP8.99□□□□□ -0.97
LINC01546-201ENST00000457435 WNT7AO00755 349 aa8.98□□□□□ -0.97
LINC01546-201ENST00000457435 CTC1Q2NKJ3 1217 aa8.98□□□□□ -0.97
LINC01546-201ENST00000457435 TREML4Q6UXN2 200 aa8.98□□□□□ -0.97
LINC01546-201ENST00000457435 SNIP1Q8TAD8 396 aaKnown RBP8.98□□□□□ -0.97
LINC01546-201ENST00000457435 MMP16P51512 607 aa8.97□□□□□ -0.97
LINC01546-201ENST00000457435 USP46P62068 366 aa8.96□□□□□ -0.98
LINC01546-201ENST00000457435 KRI1Q8N9T8 703 aaKnown RBP8.96□□□□□ -0.98
LINC01546-201ENST00000457435 HLA-CQ95604 372 aa8.96□□□□□ -0.98
LINC01546-201ENST00000457435 MRGPRX2Q96LB1 330 aa8.96□□□□□ -0.98
LINC01546-201ENST00000457435 SMPD1P17405 629 aa8.95□□□□□ -0.98
LINC01546-201ENST00000457435 MINK1Q8N4C8 1332 aaPredicted RBP8.95□□□□□ -0.98
LINC01546-201ENST00000457435 DXOO77932 396 aaKnown RBP8.94□□□□□ -0.98
LINC01546-201ENST00000457435 SMCPP49901 116 aaPredicted RBP8.94□□□□□ -0.98
LINC01546-201ENST00000457435 J3QL48 77 aa8.93□□□□□ -0.98
LINC01546-201ENST00000457435 HOXA2O43364 376 aa8.92□□□□□ -0.98
LINC01546-201ENST00000457435 GUCA2AQ02747 115 aa8.92□□□□□ -0.98
LINC01546-201ENST00000457435 NUTM1Q86Y26 1132 aa8.92□□□□□ -0.98
LINC01546-201ENST00000457435 WFS1O76024 890 aa8.91□□□□□ -0.98
LINC01546-201ENST00000457435 RC3H1Q5TC82 1133 aaKnown RBP8.91□□□□□ -0.98
LINC01546-201ENST00000457435 CCDC102AQ96A19 550 aa8.91□□□□□ -0.98
LINC01546-201ENST00000457435 REPIN1Q9BWE0 567 aaKnown RBP8.91□□□□□ -0.98
LINC01546-201ENST00000457435 CLCN1P35523 988 aa8.9□□□□□ -0.98
LINC01546-201ENST00000457435 SYMPKQ92797 1274 aaKnown RBP8.9□□□□□ -0.98
LINC01546-201ENST00000457435 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
LINC01546-201ENST00000457435 ATP13A2Q9NQ11 1180 aa8.9□□□□□ -0.98
LINC01546-201ENST00000457435 HPS1Q92902 700 aa8.89□□□□□ -0.99
LINC01546-201ENST00000457435 ALDH1A1P00352 501 aa8.87□□□□□ -0.99
LINC01546-201ENST00000457435 SNRPBP14678 240 aaKnown RBP8.87□□□□□ -0.99
LINC01546-201ENST00000457435 JUNDP17535 347 aa8.87□□□□□ -0.99
LINC01546-201ENST00000457435 WNT7BP56706 349 aa8.87□□□□□ -0.99
LINC01546-201ENST00000457435 SKOR1P84550 965 aa8.87□□□□□ -0.99
LINC01546-201ENST00000457435 LCE2AQ5TA79 106 aaPredicted RBP8.87□□□□□ -0.99
LINC01546-201ENST00000457435 VSIG10Q8N0Z9 540 aa8.87□□□□□ -0.99
LINC01546-201ENST00000457435 SENP2Q9HC62 589 aa8.87□□□□□ -0.99
LINC01546-201ENST00000457435 FAM217BQ9NTX9 383 aaPredicted RBP8.87□□□□□ -0.99
LINC01546-201ENST00000457435 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
LINC01546-201ENST00000457435 NUDT12Q9BQG2 462 aa8.85□□□□□ -0.99
LINC01546-201ENST00000457435 FDX1P10109 184 aa8.84□□□□□ -0.99
LINC01546-201ENST00000457435 RETREG3Q86VR2 466 aa8.84□□□□□ -0.99
LINC01546-201ENST00000457435 NFX1Q12986 1120 aaKnown RBP8.83□□□□□ -1
LINC01546-201ENST00000457435 EHBP1Q8NDI1 1231 aa8.83□□□□□ -1
LINC01546-201ENST00000457435 TRIM47Q96LD4 638 aa8.83□□□□□ -1
LINC01546-201ENST00000457435 PTCRAQ6ISU1 281 aaPredicted RBP8.82□□□□□ -1
LINC01546-201ENST00000457435 MS4A1P11836 297 aa8.81□□□□□ -1
LINC01546-201ENST00000457435 SSTR3P32745 418 aaPredicted RBP8.81□□□□□ -1
LINC01546-201ENST00000457435 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.81□□□□□ -1
LINC01546-201ENST00000457435 KIFC2Q96AC6 838 aa8.81□□□□□ -1
LINC01546-201ENST00000457435 WASF2Q9Y6W5 498 aa8.81□□□□□ -1
LINC01546-201ENST00000457435 TERTO14746 1132 aaKnown RBP8.8□□□□□ -1
LINC01546-201ENST00000457435 PCDHGC3Q9UN70 934 aa8.8□□□□□ -1
LINC01546-201ENST00000457435 TTLL12Q14166 644 aaPredicted RBP8.79□□□□□ -1
LINC01546-201ENST00000457435 CCNYL3P0C7X3 344 aa8.78□□□□□ -1
LINC01546-201ENST00000457435 NDUFV2P19404 249 aa8.78□□□□□ -1
LINC01546-201ENST00000457435 INSM1Q01101 510 aaPredicted RBP8.78□□□□□ -1
LINC01546-201ENST00000457435 SPIRE2Q8WWL2 714 aa8.78□□□□□ -1
LINC01546-201ENST00000457435 SIAH2O43255 324 aa8.77□□□□□ -1.01
LINC01546-201ENST00000457435 CAPN5O15484 640 aaPredicted RBP8.76□□□□□ -1.01
LINC01546-201ENST00000457435 SH3BP2P78314 561 aa8.76□□□□□ -1.01
LINC01546-201ENST00000457435 LINC01559Q495D7 138 aa8.76□□□□□ -1.01
LINC01546-201ENST00000457435 MOXD2PA6NHM9 499 aa8.75□□□□□ -1.01
LINC01546-201ENST00000457435 PRR7Q8TB68 274 aa8.75□□□□□ -1.01
LINC01546-201ENST00000457435 BAP1Q92560 729 aa8.75□□□□□ -1.01
LINC01546-201ENST00000457435 STK17AQ9UEE5 414 aa8.75□□□□□ -1.01
LINC01546-201ENST00000457435 WIPF1O43516 503 aa8.74□□□□□ -1.01
LINC01546-201ENST00000457435 BMP1P13497 986 aa8.74□□□□□ -1.01
LINC01546-201ENST00000457435 PTPRNQ16849 979 aa8.74□□□□□ -1.01
LINC01546-201ENST00000457435 SLC16A10Q8TF71 515 aa8.74□□□□□ -1.01
LINC01546-201ENST00000457435 UNC93B1Q9H1C4 597 aa8.74□□□□□ -1.01
LINC01546-201ENST00000457435 EVA1BQ9NVM1 165 aa8.74□□□□□ -1.01
LINC01546-201ENST00000457435 KCNH2Q12809 1159 aa8.72□□□□□ -1.01
LINC01546-201ENST00000457435 MTMR2Q13614 643 aa8.72□□□□□ -1.01
LINC01546-201ENST00000457435 SPDYE5A6NIY4 337 aa8.71□□□□□ -1.02
LINC01546-201ENST00000457435 CTHP32929 405 aa8.71□□□□□ -1.02
LINC01546-201ENST00000457435 BARGINQ6ZT62 677 aa8.71□□□□□ -1.02
LINC01546-201ENST00000457435 TRIM46Q7Z4K8 759 aa8.71□□□□□ -1.02
LINC01546-201ENST00000457435 BEGAINQ9BUH8 593 aa8.71□□□□□ -1.02
LINC01546-201ENST00000457435 PLEKHG3A1L390 1219 aa8.7□□□□□ -1.02
LINC01546-201ENST00000457435 GIGYF2Q6Y7W6 1299 aaKnown RBP8.7□□□□□ -1.02
LINC01546-201ENST00000457435 NXF1Q9UBU9 619 aaKnown RBP8.7□□□□□ -1.02
LINC01546-201ENST00000457435 ZMYND10O75800 440 aa8.69□□□□□ -1.02
LINC01546-201ENST00000457435 LCE2CQ5TA81 110 aa8.69□□□□□ -1.02
LINC01546-201ENST00000457435 TLL2Q9Y6L7 1015 aa8.69□□□□□ -1.02
LINC01546-201ENST00000457435 VARSP26640 1264 aaKnown RBP8.68□□□□□ -1.02
LINC01546-201ENST00000457435 VEGFBP49765 207 aa8.68□□□□□ -1.02
LINC01546-201ENST00000457435 ZNF511Q8NB15 262 aa8.68□□□□□ -1.02
LINC01546-201ENST00000457435 AMHR2Q16671 573 aa8.67□□□□□ -1.02
LINC01546-201ENST00000457435 TBC1D2Q9BYX2 928 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms