RNA–Protein interactions for RNA: ENST00000457422.6

CCDC43-202, Transcript of coiled-coil domain containing 43, humanhuman

TSL 1 (best) BASIC

Gene CCDC43, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-202ENST00000457422 ARHGEF40Q8TER5 1519 aa22.03■■□□□ 1.12
CCDC43-202ENST00000457422 CCDC146Q8IYE0 955 aa22.03■■□□□ 1.12
CCDC43-202ENST00000457422 NINLQ9Y2I6 1382 aa22.03■■□□□ 1.12
CCDC43-202ENST00000457422 NGEFQ8N5V2 710 aa22.02■■□□□ 1.12
CCDC43-202ENST00000457422 DUSP27Q5VZP5 1158 aa22.02■■□□□ 1.11
CCDC43-202ENST00000457422 EXOC6Q8TAG9 804 aa22.02■■□□□ 1.11
CCDC43-202ENST00000457422 NSD2O96028 1365 aa22.02■■□□□ 1.11
CCDC43-202ENST00000457422 FANCIQ9NVI1 1328 aa22.01■■□□□ 1.11
CCDC43-202ENST00000457422 GOLGA2Q08379 1002 aa22.01■■□□□ 1.11
CCDC43-202ENST00000457422 ALKQ9UM73 1620 aa22.01■■□□□ 1.11
CCDC43-202ENST00000457422 MORC1Q86VD1 984 aa22■■□□□ 1.11
CCDC43-202ENST00000457422 STK26Q9P289 416 aa22■■□□□ 1.11
CCDC43-202ENST00000457422 CGNL1Q0VF96 1302 aa22■■□□□ 1.11
CCDC43-202ENST00000457422 YTHDC2Q9H6S0 1430 aaKnown RBP22■■□□□ 1.11
CCDC43-202ENST00000457422 SAFB2Q14151 953 aaKnown RBP eCLIP21.99■■□□□ 1.11
CCDC43-202ENST00000457422 CABP2Q9NPB3 220 aa21.99■■□□□ 1.11
CCDC43-202ENST00000457422 TRMT2AQ8IZ69 625 aaKnown RBP21.97■■□□□ 1.11
CCDC43-202ENST00000457422 SLFN5Q08AF3 891 aa21.97■■□□□ 1.11
CCDC43-202ENST00000457422 A2ML1A8K2U0 1454 aa21.96■■□□□ 1.11
CCDC43-202ENST00000457422 APAF1O14727 1248 aa21.95■■□□□ 1.11
CCDC43-202ENST00000457422 STAG3Q9UJ98 1225 aa21.95■■□□□ 1.11
CCDC43-202ENST00000457422 PLIN1O60240 522 aa21.95■■□□□ 1.1
CCDC43-202ENST00000457422 TNNT2P45379 298 aaPredicted RBP21.95■■□□□ 1.1
CCDC43-202ENST00000457422 SETD1AO15047 1707 aaKnown RBP21.95■■□□□ 1.1
CCDC43-202ENST00000457422 ATAD2Q6PL18 1390 aa21.94■■□□□ 1.1
CCDC43-202ENST00000457422 MLECQ14165 292 aa21.94■■□□□ 1.1
CCDC43-202ENST00000457422 DLC1Q96QB1 1528 aa21.94■■□□□ 1.1
CCDC43-202ENST00000457422 MYT1Q01538 1121 aa21.93■■□□□ 1.1
CCDC43-202ENST00000457422 ABCC11Q96J66 1382 aa21.92■■□□□ 1.1
CCDC43-202ENST00000457422 PRAM1Q96QH2 718 aa21.92■■□□□ 1.1
CCDC43-202ENST00000457422 ANKRD26Q9UPS8 1709 aa21.92■■□□□ 1.1
CCDC43-202ENST00000457422 NKTRP30414 1462 aaKnown RBP21.91■■□□□ 1.1
CCDC43-202ENST00000457422 A0A1W2PP64 1363 aa21.91■■□□□ 1.1
CCDC43-202ENST00000457422 MINK1Q8N4C8 1332 aaPredicted RBP21.91■■□□□ 1.1
CCDC43-202ENST00000457422 SRPK2P78362 688 aaKnown RBP21.91■■□□□ 1.1
CCDC43-202ENST00000457422 IQSEC2Q5JU85 1478 aa21.89■■□□□ 1.1
CCDC43-202ENST00000457422 E9PSI1 815 aa21.89■■□□□ 1.1
CCDC43-202ENST00000457422 POGKQ9P215 609 aa21.89■■□□□ 1.1
CCDC43-202ENST00000457422 RIMS2Q9UQ26 1411 aa21.89■■□□□ 1.1
CCDC43-202ENST00000457422 MED14O60244 1454 aa21.89■■□□□ 1.09
CCDC43-202ENST00000457422 CRBNQ96SW2 442 aa21.88■■□□□ 1.09
CCDC43-202ENST00000457422 CD163L1Q9NR16 1453 aa21.88■■□□□ 1.09
CCDC43-202ENST00000457422 SPINK5Q9NQ38 1064 aaPredicted RBP21.87■■□□□ 1.09
CCDC43-202ENST00000457422 CFAP53Q96M91 514 aa21.87■■□□□ 1.09
CCDC43-202ENST00000457422 MTHFSP49914 203 aa21.86■■□□□ 1.09
CCDC43-202ENST00000457422 RUNDC1Q96C34 613 aa21.86■■□□□ 1.09
CCDC43-202ENST00000457422 NRXN3Q9Y4C0 1643 aa21.85■■□□□ 1.09
CCDC43-202ENST00000457422 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.84■■□□□ 1.09
CCDC43-202ENST00000457422 ANP32EQ9BTT0 268 aa21.84■■□□□ 1.09
CCDC43-202ENST00000457422 C20orf194Q5TEA3 1177 aa21.84■■□□□ 1.09
CCDC43-202ENST00000457422 TERF2IPQ9NYB0 399 aa21.84■■□□□ 1.09
CCDC43-202ENST00000457422 NLRP1Q9C000 1473 aa21.84■■□□□ 1.09
CCDC43-202ENST00000457422 NCBP3Q53F19 620 aaKnown RBP21.83■■□□□ 1.09
CCDC43-202ENST00000457422 DMRT2Q9Y5R5 561 aa21.83■■□□□ 1.09
CCDC43-202ENST00000457422 WWC1Q8IX03 1113 aa21.83■■□□□ 1.08
CCDC43-202ENST00000457422 PHF23Q9BUL5 403 aaPredicted RBP21.82■■□□□ 1.08
CCDC43-202ENST00000457422 DNAJC5Q9H3Z4 198 aa21.82■■□□□ 1.08
CCDC43-202ENST00000457422 ZMYM3Q14202 1370 aa21.82■■□□□ 1.08
CCDC43-202ENST00000457422 KIF20BQ96Q89 1820 aa21.81■■□□□ 1.08
CCDC43-202ENST00000457422 MSH5O43196 834 aa21.81■■□□□ 1.08
CCDC43-202ENST00000457422 ADGRB2O60241 1585 aa21.81■■□□□ 1.08
CCDC43-202ENST00000457422 CDK19Q9BWU1 502 aa21.8■■□□□ 1.08
CCDC43-202ENST00000457422 KNDC1Q76NI1 1749 aa21.8■■□□□ 1.08
CCDC43-202ENST00000457422 ESF1Q9H501 851 aaKnown RBP21.79■■□□□ 1.08
CCDC43-202ENST00000457422 TCERG1O14776 1098 aaKnown RBP21.79■■□□□ 1.08
CCDC43-202ENST00000457422 CCDC27Q2M243 656 aa21.79■■□□□ 1.08
CCDC43-202ENST00000457422 ABCF1Q8NE71 845 aaKnown RBP eCLIP21.79■■□□□ 1.08
CCDC43-202ENST00000457422 COL3A1P02461 1466 aaPredicted RBP21.79■■□□□ 1.08
CCDC43-202ENST00000457422 GGNBP2Q9H3C7 697 aa21.78■■□□□ 1.08
CCDC43-202ENST00000457422 ATP7BP35670 1465 aa21.77■■□□□ 1.08
CCDC43-202ENST00000457422 TCP11L2Q8N4U5 519 aa21.77■■□□□ 1.08
CCDC43-202ENST00000457422 HDGFL2Q7Z4V5 671 aaPredicted RBP21.76■■□□□ 1.07
CCDC43-202ENST00000457422 RRP7AQ9Y3A4 280 aaKnown RBP21.76■■□□□ 1.07
CCDC43-202ENST00000457422 FYB1O15117 783 aa21.76■■□□□ 1.07
CCDC43-202ENST00000457422 WAPLQ7Z5K2 1190 aa21.76■■□□□ 1.07
CCDC43-202ENST00000457422 WDR63Q8IWG1 891 aa21.76■■□□□ 1.07
CCDC43-202ENST00000457422 NEUROD2Q15784 382 aa21.74■■□□□ 1.07
CCDC43-202ENST00000457422 UBR1Q8IWV7 1749 aa21.74■■□□□ 1.07
CCDC43-202ENST00000457422 MS4A1P11836 297 aa21.73■■□□□ 1.07
CCDC43-202ENST00000457422 CABP1Q9NZU7 370 aa21.73■■□□□ 1.07
CCDC43-202ENST00000457422 TECPR2O15040 1411 aa21.73■■□□□ 1.07
CCDC43-202ENST00000457422 TNRQ92752 1358 aa21.73■■□□□ 1.07
CCDC43-202ENST00000457422 KDM2BQ8NHM5 1336 aa21.73■■□□□ 1.07
CCDC43-202ENST00000457422 U2AF1L5P0DN76 240 aaPredicted RBP21.71■■□□□ 1.07
CCDC43-202ENST00000457422 U2AF1Q01081 240 aaKnown RBP eCLIP21.71■■□□□ 1.07
CCDC43-202ENST00000457422 METP08581 1390 aa21.71■■□□□ 1.07
CCDC43-202ENST00000457422 FAM135BQ49AJ0 1406 aa21.71■■□□□ 1.07
CCDC43-202ENST00000457422 CPS1P31327 1500 aa21.71■■□□□ 1.07
CCDC43-202ENST00000457422 BCAR3O75815 825 aa21.71■■□□□ 1.07
CCDC43-202ENST00000457422 HDGFP51858 240 aaKnown RBP21.71■■□□□ 1.07
CCDC43-202ENST00000457422 SIRT1Q96EB6 747 aa21.7■■□□□ 1.06
CCDC43-202ENST00000457422 PNPLA6Q8IY17 1366 aa21.7■■□□□ 1.06
CCDC43-202ENST00000457422 CENPQQ7L2Z9 268 aaPredicted RBP21.68■■□□□ 1.06
CCDC43-202ENST00000457422 CDC42BPGQ6DT37 1551 aa21.68■■□□□ 1.06
CCDC43-202ENST00000457422 TMEM2Q9UHN6 1383 aa21.67■■□□□ 1.06
CCDC43-202ENST00000457422 CPSF1Q10570 1443 aaKnown RBP21.67■■□□□ 1.06
CCDC43-202ENST00000457422 PDE3AQ14432 1141 aa21.67■■□□□ 1.06
CCDC43-202ENST00000457422 PLEKHF1Q96S99 279 aa21.66■■□□□ 1.06
CCDC43-202ENST00000457422 WASLO00401 505 aaPredicted RBP21.65■■□□□ 1.06
CCDC43-202ENST00000457422 U2SURPO15042 1029 aaKnown RBP21.65■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms