RNA–Protein interactions for RNA: ENST00000457408.6

TMED4-203, Transcript of transmembrane p24 trafficking protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED4, Length 2,322 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED4-203ENST00000457408 PTPRMP28827 1452 aa27.4■■□□□ 1.98
TMED4-203ENST00000457408 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.4■■□□□ 1.98
TMED4-203ENST00000457408 NUDCQ9Y266 331 aa27.39■■□□□ 1.98
TMED4-203ENST00000457408 MORC1Q86VD1 984 aa27.38■■□□□ 1.97
TMED4-203ENST00000457408 SMG6Q86US8 1419 aaKnown RBP27.36■■□□□ 1.97
TMED4-203ENST00000457408 HDGFP51858 240 aaKnown RBP27.35■■□□□ 1.97
TMED4-203ENST00000457408 CDK19Q9BWU1 502 aa27.34■■□□□ 1.97
TMED4-203ENST00000457408 PUS7Q96PZ0 661 aaKnown RBP27.33■■□□□ 1.97
TMED4-203ENST00000457408 METP08581 1390 aa27.32■■□□□ 1.96
TMED4-203ENST00000457408 PLEKHH1Q9ULM0 1364 aa27.32■■□□□ 1.96
TMED4-203ENST00000457408 TXNDC2Q86VQ3 553 aa27.32■■□□□ 1.96
TMED4-203ENST00000457408 CGNL1Q0VF96 1302 aa27.31■■□□□ 1.96
TMED4-203ENST00000457408 ANKRD36BQ8N2N9 1353 aa27.3■■□□□ 1.96
TMED4-203ENST00000457408 TMEM2Q9UHN6 1383 aa27.3■■□□□ 1.96
TMED4-203ENST00000457408 BLMP54132 1417 aaPredicted RBP27.29■■□□□ 1.96
TMED4-203ENST00000457408 TSHZ2Q9NRE2 1034 aa27.28■■□□□ 1.96
TMED4-203ENST00000457408 CCDC146Q8IYE0 955 aa27.28■■□□□ 1.96
TMED4-203ENST00000457408 CDCA7LQ96GN5 454 aa27.28■■□□□ 1.96
TMED4-203ENST00000457408 LTKP29376 864 aa27.27■■□□□ 1.96
TMED4-203ENST00000457408 A0A1W2PP64 1363 aa27.26■■□□□ 1.95
TMED4-203ENST00000457408 CABP1Q9NZU7 370 aa27.25■■□□□ 1.95
TMED4-203ENST00000457408 UBR1Q8IWV7 1749 aa27.25■■□□□ 1.95
TMED4-203ENST00000457408 NRXN3Q9Y4C0 1643 aa27.24■■□□□ 1.95
TMED4-203ENST00000457408 ATAD2Q6PL18 1390 aa27.24■■□□□ 1.95
TMED4-203ENST00000457408 ABCC11Q96J66 1382 aa27.24■■□□□ 1.95
TMED4-203ENST00000457408 TERF2IPQ9NYB0 399 aa27.23■■□□□ 1.95
TMED4-203ENST00000457408 SETD1AO15047 1707 aaKnown RBP27.23■■□□□ 1.95
TMED4-203ENST00000457408 SLC26A8Q96RN1 970 aa27.21■■□□□ 1.95
TMED4-203ENST00000457408 GGNBP2Q9H3C7 697 aa27.21■■□□□ 1.95
TMED4-203ENST00000457408 C3P01024 1663 aa27.2■■□□□ 1.94
TMED4-203ENST00000457408 FER1L4A9Z1Z3 1794 aa27.19■■□□□ 1.94
TMED4-203ENST00000457408 MTHFSP49914 203 aa27.19■■□□□ 1.94
TMED4-203ENST00000457408 EID1Q9Y6B2 187 aa27.19■■□□□ 1.94
TMED4-203ENST00000457408 INSRP06213 1382 aa27.18■■□□□ 1.94
TMED4-203ENST00000457408 PDE3BQ13370 1112 aa27.18■■□□□ 1.94
TMED4-203ENST00000457408 HDGFL2Q7Z4V5 671 aaPredicted RBP27.18■■□□□ 1.94
TMED4-203ENST00000457408 NLRP1Q9C000 1473 aa27.18■■□□□ 1.94
TMED4-203ENST00000457408 NINLQ9Y2I6 1382 aa27.17■■□□□ 1.94
TMED4-203ENST00000457408 DLC1Q96QB1 1528 aa27.17■■□□□ 1.94
TMED4-203ENST00000457408 APAF1O14727 1248 aa27.15■■□□□ 1.94
TMED4-203ENST00000457408 WASLO00401 505 aaPredicted RBP27.14■■□□□ 1.94
TMED4-203ENST00000457408 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.14■■□□□ 1.94
TMED4-203ENST00000457408 POLR3AO14802 1390 aaPredicted RBP27.13■■□□□ 1.93
TMED4-203ENST00000457408 FYB1O15117 783 aa27.12■■□□□ 1.93
TMED4-203ENST00000457408 CD163L1Q9NR16 1453 aa27.12■■□□□ 1.93
TMED4-203ENST00000457408 NCKAP5LQ9HCH0 1330 aa27.12■■□□□ 1.93
TMED4-203ENST00000457408 USP32Q8NFA0 1604 aa27.12■■□□□ 1.93
TMED4-203ENST00000457408 ADAMTS13Q76LX8 1427 aa27.11■■□□□ 1.93
TMED4-203ENST00000457408 RCAN3Q9UKA8 241 aa27.11■■□□□ 1.93
TMED4-203ENST00000457408 THEMISQ8N1K5 641 aaPredicted RBP27.1■■□□□ 1.93
TMED4-203ENST00000457408 NSD2O96028 1365 aa27.1■■□□□ 1.93
TMED4-203ENST00000457408 PLEKHG1Q9ULL1 1385 aa27.1■■□□□ 1.93
TMED4-203ENST00000457408 CFAP53Q96M91 514 aa27.1■■□□□ 1.93
TMED4-203ENST00000457408 PPP4R2Q9NY27 417 aa27.1■■□□□ 1.93
TMED4-203ENST00000457408 ROBO2Q9HCK4 1378 aa27.09■■□□□ 1.93
TMED4-203ENST00000457408 NUTM2FA1L443 756 aa27.08■■□□□ 1.93
TMED4-203ENST00000457408 ERICH6BQ5W0A0 696 aa27.08■■□□□ 1.93
TMED4-203ENST00000457408 DNAJC5Q9H3Z4 198 aa27.07■■□□□ 1.92
TMED4-203ENST00000457408 NUDT16Q96DE0 195 aaKnown RBP27.07■■□□□ 1.92
TMED4-203ENST00000457408 B4GALNT3Q6L9W6 998 aa27.06■■□□□ 1.92
TMED4-203ENST00000457408 RNF123Q5XPI4 1314 aa27.06■■□□□ 1.92
TMED4-203ENST00000457408 NEUROD2Q15784 382 aa27.05■■□□□ 1.92
TMED4-203ENST00000457408 FAM135BQ49AJ0 1406 aa27.04■■□□□ 1.92
TMED4-203ENST00000457408 PPIP5K1Q6PFW1 1433 aa27.04■■□□□ 1.92
TMED4-203ENST00000457408 GOLGA2Q08379 1002 aa27.03■■□□□ 1.92
TMED4-203ENST00000457408 SIRT1Q96EB6 747 aa27.03■■□□□ 1.92
TMED4-203ENST00000457408 TECPR2O15040 1411 aa27.02■■□□□ 1.92
TMED4-203ENST00000457408 FBLN1P23142 703 aa27.02■■□□□ 1.92
TMED4-203ENST00000457408 AMOTL2Q9Y2J4 779 aa27.02■■□□□ 1.92
TMED4-203ENST00000457408 RRP1P56182 461 aaKnown RBP27.01■■□□□ 1.91
TMED4-203ENST00000457408 RRP7AQ9Y3A4 280 aaKnown RBP27.01■■□□□ 1.91
TMED4-203ENST00000457408 U2AF1L5P0DN76 240 aaPredicted RBP27■■□□□ 1.91
TMED4-203ENST00000457408 U2AF1Q01081 240 aaKnown RBP eCLIP27■■□□□ 1.91
TMED4-203ENST00000457408 CCDC61Q9Y6R9 512 aa27■■□□□ 1.91
TMED4-203ENST00000457408 ZNF521Q96K83 1311 aa26.99■■□□□ 1.91
TMED4-203ENST00000457408 CPS1P31327 1500 aa26.99■■□□□ 1.91
TMED4-203ENST00000457408 PTPRUQ92729 1446 aa26.99■■□□□ 1.91
TMED4-203ENST00000457408 PPM1GO15355 546 aaPredicted RBP26.99■■□□□ 1.91
TMED4-203ENST00000457408 RIMS1Q86UR5 1692 aaKnown RBP26.98■■□□□ 1.91
TMED4-203ENST00000457408 U2SURPO15042 1029 aaKnown RBP26.98■■□□□ 1.91
TMED4-203ENST00000457408 KNDC1Q76NI1 1749 aa26.97■■□□□ 1.91
TMED4-203ENST00000457408 SHPRHQ149N8 1683 aa26.97■■□□□ 1.91
TMED4-203ENST00000457408 SLIT1O75093 1534 aa26.97■■□□□ 1.91
TMED4-203ENST00000457408 ARHGAP23Q9P227 1491 aa26.97■■□□□ 1.91
TMED4-203ENST00000457408 PLIN1O60240 522 aa26.96■■□□□ 1.91
TMED4-203ENST00000457408 DUSP27Q5VZP5 1158 aa26.96■■□□□ 1.91
TMED4-203ENST00000457408 SPINK5Q9NQ38 1064 aaPredicted RBP26.96■■□□□ 1.91
TMED4-203ENST00000457408 PRR36Q9H6K5 1346 aa26.96■■□□□ 1.91
TMED4-203ENST00000457408 RUNDC1Q96C34 613 aa26.96■■□□□ 1.91
TMED4-203ENST00000457408 ATP7BP35670 1465 aa26.95■■□□□ 1.91
TMED4-203ENST00000457408 TBX22Q9Y458 520 aa26.95■■□□□ 1.91
TMED4-203ENST00000457408 NME9Q86XW9 330 aa26.95■■□□□ 1.9
TMED4-203ENST00000457408 ZRANB1Q9UGI0 708 aa26.95■■□□□ 1.9
TMED4-203ENST00000457408 DMRT2Q9Y5R5 561 aa26.94■■□□□ 1.9
TMED4-203ENST00000457408 TCP11L2Q8N4U5 519 aa26.94■■□□□ 1.9
TMED4-203ENST00000457408 MED14O60244 1454 aa26.93■■□□□ 1.9
TMED4-203ENST00000457408 SLFN5Q08AF3 891 aa26.93■■□□□ 1.9
TMED4-203ENST00000457408 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.91■■□□□ 1.9
TMED4-203ENST00000457408 CPSF1Q10570 1443 aaKnown RBP26.9■■□□□ 1.9
TMED4-203ENST00000457408 WWC1Q8IX03 1113 aa26.89■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms