RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 ATF5Q9Y2D1 282 aaPredicted RBP14.49□□□□□ -0.09
ATG4A-206ENST00000457035 TMEM94Q12767 1356 aa14.48□□□□□ -0.09
ATG4A-206ENST00000457035 ASXL1Q8IXJ9 1541 aa14.48□□□□□ -0.09
ATG4A-206ENST00000457035 PRAG1Q86YV5 1406 aa14.48□□□□□ -0.09
ATG4A-206ENST00000457035 LAMC1P11047 1609 aa14.47□□□□□ -0.09
ATG4A-206ENST00000457035 LRPPRCP42704 1394 aaKnown RBP14.47□□□□□ -0.09
ATG4A-206ENST00000457035 ABCC11Q96J66 1382 aa14.47□□□□□ -0.09
ATG4A-206ENST00000457035 ATXN8OSP0DMR3 200 aa14.46□□□□□ -0.09
ATG4A-206ENST00000457035 STK26Q9P289 416 aa14.46□□□□□ -0.09
ATG4A-206ENST00000457035 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.09
ATG4A-206ENST00000457035 TONSLQ96HA7 1378 aa14.46□□□□□ -0.1
ATG4A-206ENST00000457035 ADGRB1O14514 1584 aa14.45□□□□□ -0.1
ATG4A-206ENST00000457035 NBPF1Q3BBV0 1214 aa14.45□□□□□ -0.1
ATG4A-206ENST00000457035 NBPF8Q3BBV2 869 aa14.45□□□□□ -0.1
ATG4A-206ENST00000457035 YTHDC2Q9H6S0 1430 aaKnown RBP14.45□□□□□ -0.1
ATG4A-206ENST00000457035 KIAA1210Q9ULL0 1709 aa14.45□□□□□ -0.1
ATG4A-206ENST00000457035 ROBO1Q9Y6N7 1651 aa14.45□□□□□ -0.1
ATG4A-206ENST00000457035 ROBO2Q9HCK4 1378 aa14.45□□□□□ -0.1
ATG4A-206ENST00000457035 SIRT1Q96EB6 747 aa14.44□□□□□ -0.1
ATG4A-206ENST00000457035 TIMELESSQ9UNS1 1208 aa14.44□□□□□ -0.1
ATG4A-206ENST00000457035 TECPR2O15040 1411 aa14.43□□□□□ -0.1
ATG4A-206ENST00000457035 C19orf44Q9H6X5 657 aa14.43□□□□□ -0.1
ATG4A-206ENST00000457035 PTCH1Q13635 1447 aa14.42□□□□□ -0.1
ATG4A-206ENST00000457035 KNDC1Q76NI1 1749 aa14.42□□□□□ -0.1
ATG4A-206ENST00000457035 WAPLQ7Z5K2 1190 aa14.42□□□□□ -0.1
ATG4A-206ENST00000457035 TRAK1Q9UPV9 953 aa14.4□□□□□ -0.1
ATG4A-206ENST00000457035 PHLPP1O60346 1717 aa14.4□□□□□ -0.1
ATG4A-206ENST00000457035 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.4□□□□□ -0.1
ATG4A-206ENST00000457035 MSH6P52701 1360 aa14.39□□□□□ -0.11
ATG4A-206ENST00000457035 PLEKHH1Q9ULM0 1364 aa14.39□□□□□ -0.11
ATG4A-206ENST00000457035 C14orf37Q86TY3 774 aa14.39□□□□□ -0.11
ATG4A-206ENST00000457035 TRPM1Q7Z4N2 1603 aa14.39□□□□□ -0.11
ATG4A-206ENST00000457035 FAM135BQ49AJ0 1406 aa14.39□□□□□ -0.11
ATG4A-206ENST00000457035 DLC1Q96QB1 1528 aa14.38□□□□□ -0.11
ATG4A-206ENST00000457035 POLA2Q14181 598 aa14.38□□□□□ -0.11
ATG4A-206ENST00000457035 PRAM1Q96QH2 718 aa14.37□□□□□ -0.11
ATG4A-206ENST00000457035 NALCNQ8IZF0 1738 aa14.36□□□□□ -0.11
ATG4A-206ENST00000457035 ADGRL3Q9HAR2 1447 aa14.36□□□□□ -0.11
ATG4A-206ENST00000457035 CADPS2Q86UW7 1296 aa14.36□□□□□ -0.11
ATG4A-206ENST00000457035 SLAIN2Q9P270 581 aa14.36□□□□□ -0.11
ATG4A-206ENST00000457035 ATF3P18847 181 aa14.35□□□□□ -0.11
ATG4A-206ENST00000457035 POGKQ9P215 609 aa14.35□□□□□ -0.11
ATG4A-206ENST00000457035 ARHGEF28Q8N1W1 1705 aaKnown RBP14.35□□□□□ -0.11
ATG4A-206ENST00000457035 GPRASP1Q5JY77 1395 aa14.34□□□□□ -0.11
ATG4A-206ENST00000457035 SAFB2Q14151 953 aaKnown RBP eCLIP14.34□□□□□ -0.11
ATG4A-206ENST00000457035 ROCK2O75116 1388 aaKnown RBP14.34□□□□□ -0.11
ATG4A-206ENST00000457035 DCCP43146 1447 aa14.33□□□□□ -0.11
ATG4A-206ENST00000457035 RALGAPBQ86X10 1494 aa14.31□□□□□ -0.12
ATG4A-206ENST00000457035 CARD11Q9BXL7 1154 aa14.31□□□□□ -0.12
ATG4A-206ENST00000457035 RGS17Q9UGC6 210 aaPredicted RBP14.31□□□□□ -0.12
ATG4A-206ENST00000457035 MST1RQ04912 1400 aa14.3□□□□□ -0.12
ATG4A-206ENST00000457035 MINK1Q8N4C8 1332 aaPredicted RBP14.29□□□□□ -0.12
ATG4A-206ENST00000457035 RGPD8O14715 1765 aaPredicted RBP14.28□□□□□ -0.12
ATG4A-206ENST00000457035 COL16A1Q07092 1604 aaPredicted RBP14.28□□□□□ -0.12
ATG4A-206ENST00000457035 CDC42BPGQ6DT37 1551 aa14.28□□□□□ -0.12
ATG4A-206ENST00000457035 HIRIP3Q9BW71 556 aaPredicted RBP14.28□□□□□ -0.12
ATG4A-206ENST00000457035 CENPJQ9HC77 1338 aaPredicted RBP14.28□□□□□ -0.12
ATG4A-206ENST00000457035 C1orf167Q5SNV9 1468 aa14.27□□□□□ -0.12
ATG4A-206ENST00000457035 WASLO00401 505 aaPredicted RBP14.26□□□□□ -0.13
ATG4A-206ENST00000457035 BRINP3Q76B58 766 aa14.26□□□□□ -0.13
ATG4A-206ENST00000457035 ORAI2Q96SN7 254 aa14.26□□□□□ -0.13
ATG4A-206ENST00000457035 FMN2Q9NZ56 1722 aa14.26□□□□□ -0.13
ATG4A-206ENST00000457035 ADGRB2O60241 1585 aa14.26□□□□□ -0.13
ATG4A-206ENST00000457035 NUTM2FA1L443 756 aa14.25□□□□□ -0.13
ATG4A-206ENST00000457035 POTEAQ6S8J7 498 aa14.24□□□□□ -0.13
ATG4A-206ENST00000457035 SHPRHQ149N8 1683 aa14.23□□□□□ -0.13
ATG4A-206ENST00000457035 CDK19Q9BWU1 502 aa14.23□□□□□ -0.13
ATG4A-206ENST00000457035 QRICH2Q9H0J4 1663 aa14.23□□□□□ -0.13
ATG4A-206ENST00000457035 EIF3AQ14152 1382 aaKnown RBP14.22□□□□□ -0.13
ATG4A-206ENST00000457035 JCADQ9P266 1359 aa14.22□□□□□ -0.13
ATG4A-206ENST00000457035 ST20-MTHFSA0A0A6YYL1 179 aa14.22□□□□□ -0.13
ATG4A-206ENST00000457035 ESCO1Q5FWF5 840 aa14.22□□□□□ -0.13
ATG4A-206ENST00000457035 AHDC1Q5TGY3 1603 aaPredicted RBP14.22□□□□□ -0.13
ATG4A-206ENST00000457035 PRR36Q9H6K5 1346 aa14.21□□□□□ -0.13
ATG4A-206ENST00000457035 USP32Q8NFA0 1604 aa14.21□□□□□ -0.13
ATG4A-206ENST00000457035 DDX17Q92841 729 aaKnown RBP14.2□□□□□ -0.14
ATG4A-206ENST00000457035 NUDT16Q96DE0 195 aaKnown RBP14.2□□□□□ -0.14
ATG4A-206ENST00000457035 TESK2Q96S53 571 aa14.2□□□□□ -0.14
ATG4A-206ENST00000457035 SBNO2Q9Y2G9 1366 aa14.2□□□□□ -0.14
ATG4A-206ENST00000457035 ANKARQ7Z5J8 1434 aa14.19□□□□□ -0.14
ATG4A-206ENST00000457035 TULP4Q9NRJ4 1543 aa14.19□□□□□ -0.14
ATG4A-206ENST00000457035 USP47Q96K76 1375 aa14.19□□□□□ -0.14
ATG4A-206ENST00000457035 LRP6O75581 1613 aa14.19□□□□□ -0.14
ATG4A-206ENST00000457035 NHSL1Q5SYE7 1610 aa14.19□□□□□ -0.14
ATG4A-206ENST00000457035 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
ATG4A-206ENST00000457035 FOXO3O43524 673 aa14.18□□□□□ -0.14
ATG4A-206ENST00000457035 CABP2Q9NPB3 220 aa14.18□□□□□ -0.14
ATG4A-206ENST00000457035 PHF8Q9UPP1 1060 aa14.18□□□□□ -0.14
ATG4A-206ENST00000457035 MEX3CQ5U5Q3 659 aaKnown RBP14.17□□□□□ -0.14
ATG4A-206ENST00000457035 CCDC61Q9Y6R9 512 aa14.17□□□□□ -0.14
ATG4A-206ENST00000457035 SRPK2P78362 688 aaKnown RBP14.16□□□□□ -0.14
ATG4A-206ENST00000457035 PMFBP1Q8TBY8 1022 aa14.16□□□□□ -0.14
ATG4A-206ENST00000457035 SOS2Q07890 1332 aaPredicted RBP14.15□□□□□ -0.14
ATG4A-206ENST00000457035 ATP7BP35670 1465 aa14.15□□□□□ -0.14
ATG4A-206ENST00000457035 PLEKHG3A1L390 1219 aa14.15□□□□□ -0.14
ATG4A-206ENST00000457035 SLC24A1O60721 1099 aa14.15□□□□□ -0.14
ATG4A-206ENST00000457035 SPATA31A6Q5VVP1 1343 aa14.14□□□□□ -0.15
ATG4A-206ENST00000457035 NPHP3Q7Z494 1330 aa14.14□□□□□ -0.15
ATG4A-206ENST00000457035 KIF1AQ12756 1690 aa14.14□□□□□ -0.15
ATG4A-206ENST00000457035 ITSN1Q15811 1721 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 116 ms