RNA–Protein interactions for RNA: ENST00000456312.5

SBDSP1-205, Transcript of SBDS, ribosome maturation factor pseudogene 1, humanhuman

TSL 5

Gene SBDSP1, Length 963 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SBDSP1-205ENST00000456312 TRAK1Q9UPV9 953 aa26.66■■□□□ 1.86
SBDSP1-205ENST00000456312 MSH6P52701 1360 aa26.64■■□□□ 1.86
SBDSP1-205ENST00000456312 PRAM1Q96QH2 718 aa26.63■■□□□ 1.85
SBDSP1-205ENST00000456312 C19orf44Q9H6X5 657 aa26.63■■□□□ 1.85
SBDSP1-205ENST00000456312 RGPD8O14715 1765 aaPredicted RBP26.61■■□□□ 1.85
SBDSP1-205ENST00000456312 USP32Q8NFA0 1604 aa26.58■■□□□ 1.85
SBDSP1-205ENST00000456312 MST1RQ04912 1400 aa26.58■■□□□ 1.85
SBDSP1-205ENST00000456312 CARD11Q9BXL7 1154 aa26.56■■□□□ 1.84
SBDSP1-205ENST00000456312 ROBO1Q9Y6N7 1651 aa26.56■■□□□ 1.84
SBDSP1-205ENST00000456312 POGKQ9P215 609 aa26.53■■□□□ 1.84
SBDSP1-205ENST00000456312 UBAP1LF5GYI3 381 aa26.52■■□□□ 1.84
SBDSP1-205ENST00000456312 C14orf37Q86TY3 774 aa26.52■■□□□ 1.84
SBDSP1-205ENST00000456312 CADPS2Q86UW7 1296 aa26.52■■□□□ 1.84
SBDSP1-205ENST00000456312 CENPJQ9HC77 1338 aaPredicted RBP26.52■■□□□ 1.84
SBDSP1-205ENST00000456312 TULP4Q9NRJ4 1543 aa26.52■■□□□ 1.84
SBDSP1-205ENST00000456312 SBNO2Q9Y2G9 1366 aa26.52■■□□□ 1.84
SBDSP1-205ENST00000456312 EIF3AQ14152 1382 aaKnown RBP26.51■■□□□ 1.83
SBDSP1-205ENST00000456312 TOM1O60784 492 aa26.51■■□□□ 1.83
SBDSP1-205ENST00000456312 SAFB2Q14151 953 aaKnown RBP eCLIP26.51■■□□□ 1.83
SBDSP1-205ENST00000456312 TOPAZ1Q8N9V7 1692 aa26.5■■□□□ 1.83
SBDSP1-205ENST00000456312 C1orf167Q5SNV9 1468 aa26.49■■□□□ 1.83
SBDSP1-205ENST00000456312 NHSL1Q5SYE7 1610 aa26.48■■□□□ 1.83
SBDSP1-205ENST00000456312 ITSN1Q15811 1721 aa26.48■■□□□ 1.83
SBDSP1-205ENST00000456312 USP47Q96K76 1375 aa26.47■■□□□ 1.83
SBDSP1-205ENST00000456312 MINK1Q8N4C8 1332 aaPredicted RBP26.47■■□□□ 1.83
SBDSP1-205ENST00000456312 ATF3P18847 181 aa26.47■■□□□ 1.83
SBDSP1-205ENST00000456312 SLAIN2Q9P270 581 aa26.46■■□□□ 1.83
SBDSP1-205ENST00000456312 ATP7BP35670 1465 aa26.44■■□□□ 1.82
SBDSP1-205ENST00000456312 HIRIP3Q9BW71 556 aaPredicted RBP26.44■■□□□ 1.82
SBDSP1-205ENST00000456312 ANKARQ7Z5J8 1434 aa26.44■■□□□ 1.82
SBDSP1-205ENST00000456312 KIF1AQ12756 1690 aa26.43■■□□□ 1.82
SBDSP1-205ENST00000456312 AHDC1Q5TGY3 1603 aaPredicted RBP26.43■■□□□ 1.82
SBDSP1-205ENST00000456312 WASLO00401 505 aaPredicted RBP26.42■■□□□ 1.82
SBDSP1-205ENST00000456312 TESK2Q96S53 571 aa26.42■■□□□ 1.82
SBDSP1-205ENST00000456312 PRR36Q9H6K5 1346 aa26.4■■□□□ 1.82
SBDSP1-205ENST00000456312 ST20-MTHFSA0A0A6YYL1 179 aa26.39■■□□□ 1.82
SBDSP1-205ENST00000456312 BRINP3Q76B58 766 aa26.38■■□□□ 1.81
SBDSP1-205ENST00000456312 PHLPP1O60346 1717 aa26.37■■□□□ 1.81
SBDSP1-205ENST00000456312 COL16A1Q07092 1604 aaPredicted RBP26.37■■□□□ 1.81
SBDSP1-205ENST00000456312 PIP4K2BP78356 416 aa26.37■■□□□ 1.81
SBDSP1-205ENST00000456312 ORAI2Q96SN7 254 aa26.34■■□□□ 1.81
SBDSP1-205ENST00000456312 CDK19Q9BWU1 502 aa26.34■■□□□ 1.81
SBDSP1-205ENST00000456312 NUTM2FA1L443 756 aa26.32■■□□□ 1.8
SBDSP1-205ENST00000456312 EVC2Q86UK5 1308 aa26.3■■□□□ 1.8
SBDSP1-205ENST00000456312 AKAP12Q02952 1782 aa26.3■■□□□ 1.8
SBDSP1-205ENST00000456312 TRPM3Q9HCF6 1732 aaPredicted RBP26.29■■□□□ 1.8
SBDSP1-205ENST00000456312 NUDT16Q96DE0 195 aaKnown RBP26.28■■□□□ 1.8
SBDSP1-205ENST00000456312 DISP3Q9P2K9 1392 aa26.28■■□□□ 1.8
SBDSP1-205ENST00000456312 PXDNQ92626 1479 aa26.28■■□□□ 1.8
SBDSP1-205ENST00000456312 MYOM1P52179 1685 aa26.28■■□□□ 1.8
SBDSP1-205ENST00000456312 HSPA5P11021 654 aaKnown RBP26.27■■□□□ 1.8
SBDSP1-205ENST00000456312 EIF4G2P78344 907 aaKnown RBP eCLIP26.27■■□□□ 1.8
SBDSP1-205ENST00000456312 CABP2Q9NPB3 220 aa26.27■■□□□ 1.8
SBDSP1-205ENST00000456312 SCAF1Q9H7N4 1312 aaKnown RBP26.27■■□□□ 1.8
SBDSP1-205ENST00000456312 ESCO1Q5FWF5 840 aa26.26■■□□□ 1.79
SBDSP1-205ENST00000456312 PUS7Q96PZ0 661 aaKnown RBP26.24■■□□□ 1.79
SBDSP1-205ENST00000456312 MON2Q7Z3U7 1717 aa26.23■■□□□ 1.79
SBDSP1-205ENST00000456312 SHPRHQ149N8 1683 aa26.23■■□□□ 1.79
SBDSP1-205ENST00000456312 HSPA1LP34931 641 aa26.23■■□□□ 1.79
SBDSP1-205ENST00000456312 PHF8Q9UPP1 1060 aa26.23■■□□□ 1.79
SBDSP1-205ENST00000456312 CCDC61Q9Y6R9 512 aa26.23■■□□□ 1.79
SBDSP1-205ENST00000456312 POLR3AO14802 1390 aaPredicted RBP26.22■■□□□ 1.79
SBDSP1-205ENST00000456312 SOS2Q07890 1332 aaPredicted RBP26.22■■□□□ 1.79
SBDSP1-205ENST00000456312 SLC24A1O60721 1099 aa26.22■■□□□ 1.79
SBDSP1-205ENST00000456312 SRPK2P78362 688 aaKnown RBP26.22■■□□□ 1.79
SBDSP1-205ENST00000456312 DDX17Q92841 729 aaKnown RBP26.22■■□□□ 1.79
SBDSP1-205ENST00000456312 PPIP5K1Q6PFW1 1433 aa26.22■■□□□ 1.79
SBDSP1-205ENST00000456312 ATAD2Q6PL18 1390 aa26.21■■□□□ 1.79
SBDSP1-205ENST00000456312 ALS2Q96Q42 1657 aa26.21■■□□□ 1.79
SBDSP1-205ENST00000456312 PLEKHG3A1L390 1219 aa26.2■■□□□ 1.78
SBDSP1-205ENST00000456312 NRKQ7Z2Y5 1582 aa26.2■■□□□ 1.78
SBDSP1-205ENST00000456312 CD163L1Q9NR16 1453 aa26.19■■□□□ 1.78
SBDSP1-205ENST00000456312 ZEB1P37275 1124 aaPredicted RBP26.19■■□□□ 1.78
SBDSP1-205ENST00000456312 NPHP3Q7Z494 1330 aa26.18■■□□□ 1.78
SBDSP1-205ENST00000456312 FOXO3O43524 673 aa26.17■■□□□ 1.78
SBDSP1-205ENST00000456312 TMF1P82094 1093 aa26.17■■□□□ 1.78
SBDSP1-205ENST00000456312 PMFBP1Q8TBY8 1022 aa26.17■■□□□ 1.78
SBDSP1-205ENST00000456312 COL22A1Q8NFW1 1626 aaPredicted RBP26.17■■□□□ 1.78
SBDSP1-205ENST00000456312 CPSF1Q10570 1443 aaKnown RBP26.15■■□□□ 1.78
SBDSP1-205ENST00000456312 CRYBG1Q9Y4K1 1723 aa26.14■■□□□ 1.78
SBDSP1-205ENST00000456312 ACEP12821 1306 aa26.13■■□□□ 1.77
SBDSP1-205ENST00000456312 ABCA3Q99758 1704 aa26.12■■□□□ 1.77
SBDSP1-205ENST00000456312 C11orf95C9JLR9 678 aaPredicted RBP26.12■■□□□ 1.77
SBDSP1-205ENST00000456312 CABP1Q9NZU7 370 aa26.12■■□□□ 1.77
SBDSP1-205ENST00000456312 SSH2Q76I76 1423 aa26.12■■□□□ 1.77
SBDSP1-205ENST00000456312 NINLQ9Y2I6 1382 aa26.11■■□□□ 1.77
SBDSP1-205ENST00000456312 SBNO1A3KN83 1393 aa26.1■■□□□ 1.77
SBDSP1-205ENST00000456312 MARF1Q9Y4F3 1742 aaKnown RBP26.1■■□□□ 1.77
SBDSP1-205ENST00000456312 USP6P35125 1406 aa26.09■■□□□ 1.77
SBDSP1-205ENST00000456312 TNS3Q68CZ2 1445 aa26.08■■□□□ 1.77
SBDSP1-205ENST00000456312 XPCQ01831 940 aaPredicted RBP26.08■■□□□ 1.77
SBDSP1-205ENST00000456312 KRT28Q7Z3Y7 464 aa26.08■■□□□ 1.77
SBDSP1-205ENST00000456312 PIK3C2AO00443 1686 aa26.07■■□□□ 1.76
SBDSP1-205ENST00000456312 USP54Q70EL1 1684 aa26.07■■□□□ 1.76
SBDSP1-205ENST00000456312 PNPLA6Q8IY17 1366 aa26.07■■□□□ 1.76
SBDSP1-205ENST00000456312 JCADQ9P266 1359 aa26.07■■□□□ 1.76
SBDSP1-205ENST00000456312 CDCA8Q53HL2 280 aa26.06■■□□□ 1.76
SBDSP1-205ENST00000456312 NGDNQ8NEJ9 315 aaKnown RBP26.06■■□□□ 1.76
SBDSP1-205ENST00000456312 SLC12A5Q9H2X9 1139 aa26.06■■□□□ 1.76
SBDSP1-205ENST00000456312 MED1Q15648 1581 aaPredicted RBP26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms