RNA–Protein interactions for RNA: ENST00000455624.6

SCN5A-210, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

TSL 1 (best) BASIC

Gene SCN5A, Length 7,170 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-210ENST00000455624 CDR1P51861 262 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 WIZO95785 1651 aa12.25□□□□□ -0.45
SCN5A-210ENST00000455624 VPS37CA5D8V6 355 aaPredicted RBP12.24□□□□□ -0.45
SCN5A-210ENST00000455624 ZFYVE27Q5T4F4 411 aa12.24□□□□□ -0.45
SCN5A-210ENST00000455624 RALYLQ86SE5 291 aaKnown RBP12.24□□□□□ -0.45
SCN5A-210ENST00000455624 MIA2Q96PC5 1412 aa12.24□□□□□ -0.45
SCN5A-210ENST00000455624 XBP1P17861 261 aa12.24□□□□□ -0.45
SCN5A-210ENST00000455624 SLC4A3P48751 1232 aa12.24□□□□□ -0.45
SCN5A-210ENST00000455624 DZIP1LQ8IYY4 767 aaKnown RBP12.23□□□□□ -0.45
SCN5A-210ENST00000455624 CYB5RLQ6IPT4 315 aa12.23□□□□□ -0.45
SCN5A-210ENST00000455624 EXOC6Q8TAG9 804 aa12.23□□□□□ -0.45
SCN5A-210ENST00000455624 USP47Q96K76 1375 aa12.23□□□□□ -0.45
SCN5A-210ENST00000455624 PTPRGP23470 1445 aa12.23□□□□□ -0.45
SCN5A-210ENST00000455624 PDE4AP27815 886 aa12.22□□□□□ -0.45
SCN5A-210ENST00000455624 CCAR1Q8IX12 1150 aaKnown RBP12.22□□□□□ -0.45
SCN5A-210ENST00000455624 CCDC73Q6ZRK6 1079 aa12.22□□□□□ -0.45
SCN5A-210ENST00000455624 RUNDC1Q96C34 613 aa12.22□□□□□ -0.45
SCN5A-210ENST00000455624 NLRP2Q9NX02 1062 aa12.21□□□□□ -0.45
SCN5A-210ENST00000455624 SMG6Q86US8 1419 aaKnown RBP12.21□□□□□ -0.45
SCN5A-210ENST00000455624 GNAI1P63096 354 aa12.21□□□□□ -0.45
SCN5A-210ENST00000455624 NUTM2GQ5VZR2 741 aa12.21□□□□□ -0.46
SCN5A-210ENST00000455624 DHX57Q6P158 1386 aaKnown RBP12.21□□□□□ -0.46
SCN5A-210ENST00000455624 SLC3A2P08195 630 aaKnown RBP12.21□□□□□ -0.46
SCN5A-210ENST00000455624 PDILTQ8N807 584 aa12.21□□□□□ -0.46
SCN5A-210ENST00000455624 CAGE1Q8TC20 777 aa12.21□□□□□ -0.46
SCN5A-210ENST00000455624 ACBD3Q9H3P7 528 aa12.21□□□□□ -0.46
SCN5A-210ENST00000455624 RDXP35241 583 aaKnown RBP12.2□□□□□ -0.46
SCN5A-210ENST00000455624 HSP90AA2PQ14568 343 aaPredicted RBP12.2□□□□□ -0.46
SCN5A-210ENST00000455624 HMOX1P09601 288 aa12.2□□□□□ -0.46
SCN5A-210ENST00000455624 CDK5RAP3Q96JB5 506 aa12.2□□□□□ -0.46
SCN5A-210ENST00000455624 TBC1D2BQ9UPU7 963 aa12.2□□□□□ -0.46
SCN5A-210ENST00000455624 APAF1O14727 1248 aa12.2□□□□□ -0.46
SCN5A-210ENST00000455624 TTC39AQ5SRH9 613 aa12.2□□□□□ -0.46
SCN5A-210ENST00000455624 CNTROBQ8N137 903 aa12.2□□□□□ -0.46
SCN5A-210ENST00000455624 FAM177BA6PVY3 158 aa12.19□□□□□ -0.46
SCN5A-210ENST00000455624 PSMA5P28066 241 aa12.19□□□□□ -0.46
SCN5A-210ENST00000455624 NAT10Q9H0A0 1025 aaKnown RBP12.19□□□□□ -0.46
SCN5A-210ENST00000455624 CCDC173Q0VFZ6 552 aa12.19□□□□□ -0.46
SCN5A-210ENST00000455624 UBTFL1P0CB47 393 aaPredicted RBP12.19□□□□□ -0.46
SCN5A-210ENST00000455624 MYO6Q9UM54 1294 aa12.19□□□□□ -0.46
SCN5A-210ENST00000455624 SF3B2Q13435 895 aaKnown RBP12.18□□□□□ -0.46
SCN5A-210ENST00000455624 SART3Q15020 963 aaKnown RBP12.18□□□□□ -0.46
SCN5A-210ENST00000455624 MNS1Q8NEH6 495 aa12.18□□□□□ -0.46
SCN5A-210ENST00000455624 DNAJC2Q99543 621 aaKnown RBP12.18□□□□□ -0.46
SCN5A-210ENST00000455624 RBM42Q9BTD8 480 aaKnown RBP12.18□□□□□ -0.46
SCN5A-210ENST00000455624 RSPH6AQ9H0K4 717 aa12.18□□□□□ -0.46
SCN5A-210ENST00000455624 FAM69CQ0P6D2 419 aa12.18□□□□□ -0.46
SCN5A-210ENST00000455624 OFD1O75665 1012 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 PPP1R1BQ9UD71 204 aaPredicted RBP12.17□□□□□ -0.46
SCN5A-210ENST00000455624 FSD1Q9BTV5 496 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 MAGEC2Q9UBF1 373 aaPredicted RBP12.17□□□□□ -0.46
SCN5A-210ENST00000455624 ARGLU1Q9NWB6 273 aaPredicted RBP12.17□□□□□ -0.46
SCN5A-210ENST00000455624 GPRASP1Q5JY77 1395 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 CADPSQ9ULU8 1353 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 GSE1Q14687 1217 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 OSCARQ8IYS5 282 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 IFT57Q9NWB7 429 aa12.17□□□□□ -0.46
SCN5A-210ENST00000455624 CALRP27797 417 aaKnown RBP12.16□□□□□ -0.46
SCN5A-210ENST00000455624 PAF1Q8N7H5 531 aa12.16□□□□□ -0.46
SCN5A-210ENST00000455624 SYCP1Q15431 976 aa12.16□□□□□ -0.46
SCN5A-210ENST00000455624 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.16□□□□□ -0.46
SCN5A-210ENST00000455624 CUX1P39880 1505 aa12.16□□□□□ -0.46
SCN5A-210ENST00000455624 KRT18P05783 430 aaKnown RBP12.16□□□□□ -0.46
SCN5A-210ENST00000455624 NUCB2P80303 420 aa12.15□□□□□ -0.46
SCN5A-210ENST00000455624 CDC45O75419 566 aa12.15□□□□□ -0.46
SCN5A-210ENST00000455624 CHMP5Q9NZZ3 219 aa12.15□□□□□ -0.46
SCN5A-210ENST00000455624 FANCD2Q9BXW9 1451 aa12.15□□□□□ -0.46
SCN5A-210ENST00000455624 CABP2Q9NPB3 220 aa12.15□□□□□ -0.47
SCN5A-210ENST00000455624 ZBED9Q6R2W3 1325 aa12.14□□□□□ -0.47
SCN5A-210ENST00000455624 TTLL5Q6EMB2 1281 aa12.14□□□□□ -0.47
SCN5A-210ENST00000455624 CCDC30Q5VVM6 783 aa12.14□□□□□ -0.47
SCN5A-210ENST00000455624 GNL3LQ9NVN8 582 aaKnown RBP12.14□□□□□ -0.47
SCN5A-210ENST00000455624 CNNM1Q9NRU3 951 aa12.14□□□□□ -0.47
SCN5A-210ENST00000455624 ARHGAP5Q13017 1502 aa12.14□□□□□ -0.47
SCN5A-210ENST00000455624 SKIDA1Q1XH10 827 aa12.13□□□□□ -0.47
SCN5A-210ENST00000455624 NOM1Q5C9Z4 860 aaKnown RBP12.13□□□□□ -0.47
SCN5A-210ENST00000455624 ESCO1Q5FWF5 840 aa12.13□□□□□ -0.47
SCN5A-210ENST00000455624 SMARCE1Q969G3 411 aa12.13□□□□□ -0.47
SCN5A-210ENST00000455624 TXLNAP40222 546 aa12.13□□□□□ -0.47
SCN5A-210ENST00000455624 PLEKHO1Q53GL0 409 aaPredicted RBP12.13□□□□□ -0.47
SCN5A-210ENST00000455624 STRN4Q9NRL3 753 aa12.13□□□□□ -0.47
SCN5A-210ENST00000455624 HIP1O00291 1037 aa12.12□□□□□ -0.47
SCN5A-210ENST00000455624 LETM1O95202 739 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-210ENST00000455624 ATP2B2Q01814 1243 aa12.12□□□□□ -0.47
SCN5A-210ENST00000455624 DCTN1Q14203 1278 aa12.12□□□□□ -0.47
SCN5A-210ENST00000455624 BCL11BQ9C0K0 894 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-210ENST00000455624 CCDC158Q5M9N0 1113 aa12.12□□□□□ -0.47
SCN5A-210ENST00000455624 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-210ENST00000455624 ERCC4Q92889 916 aaPredicted RBP12.12□□□□□ -0.47
SCN5A-210ENST00000455624 SMC2O95347 1197 aa12.11□□□□□ -0.47
SCN5A-210ENST00000455624 LNPKQ9C0E8 428 aa12.11□□□□□ -0.47
SCN5A-210ENST00000455624 CCDC39Q9UFE4 941 aa12.11□□□□□ -0.47
SCN5A-210ENST00000455624 FILIP1LQ4L180 1135 aa12.11□□□□□ -0.47
SCN5A-210ENST00000455624 ABTB2Q8N961 1025 aa12.11□□□□□ -0.47
SCN5A-210ENST00000455624 RBM5P52756 815 aaKnown RBP eCLIP12.11□□□□□ -0.47
SCN5A-210ENST00000455624 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
SCN5A-210ENST00000455624 ERC1Q8IUD2 1116 aa12.1□□□□□ -0.47
SCN5A-210ENST00000455624 GAS2L2Q8NHY3 880 aa12.1□□□□□ -0.47
SCN5A-210ENST00000455624 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.1□□□□□ -0.47
SCN5A-210ENST00000455624 NLRP6P59044 892 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms