RNA–Protein interactions for RNA: ENST00000455586.6

VSIG4-204, Transcript of V-set and immunoglobulin domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VSIG4, Length 2,190 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSIG4-204ENST00000455586 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
VSIG4-204ENST00000455586 SRPK2P78362 688 aaKnown RBP12.54□□□□□ -0.4
VSIG4-204ENST00000455586 TULP4Q9NRJ4 1543 aa12.54□□□□□ -0.4
VSIG4-204ENST00000455586 NLRP1Q9C000 1473 aa12.54□□□□□ -0.4
VSIG4-204ENST00000455586 HDGFP51858 240 aaKnown RBP12.53□□□□□ -0.4
VSIG4-204ENST00000455586 AMER1Q5JTC6 1135 aaPredicted RBP12.53□□□□□ -0.4
VSIG4-204ENST00000455586 NPC1L1Q9UHC9 1359 aa12.53□□□□□ -0.4
VSIG4-204ENST00000455586 EVC2Q86UK5 1308 aa12.53□□□□□ -0.4
VSIG4-204ENST00000455586 EID1Q9Y6B2 187 aa12.52□□□□□ -0.4
VSIG4-204ENST00000455586 SETD1AO15047 1707 aaKnown RBP12.52□□□□□ -0.41
VSIG4-204ENST00000455586 THEMISQ8N1K5 641 aaPredicted RBP12.52□□□□□ -0.41
VSIG4-204ENST00000455586 ADAMTS13Q76LX8 1427 aa12.51□□□□□ -0.41
VSIG4-204ENST00000455586 FKBP8Q14318 412 aa12.51□□□□□ -0.41
VSIG4-204ENST00000455586 CDK19Q9BWU1 502 aa12.51□□□□□ -0.41
VSIG4-204ENST00000455586 INSRP06213 1382 aa12.5□□□□□ -0.41
VSIG4-204ENST00000455586 NCKAP5LQ9HCH0 1330 aa12.49□□□□□ -0.41
VSIG4-204ENST00000455586 TNNT2P45379 298 aaPredicted RBP12.49□□□□□ -0.41
VSIG4-204ENST00000455586 ADAMTSL3P82987 1691 aa12.49□□□□□ -0.41
VSIG4-204ENST00000455586 ABCC11Q96J66 1382 aa12.49□□□□□ -0.41
VSIG4-204ENST00000455586 PLEKHG1Q9ULL1 1385 aa12.49□□□□□ -0.41
VSIG4-204ENST00000455586 ROBO2Q9HCK4 1378 aa12.48□□□□□ -0.41
VSIG4-204ENST00000455586 NUTM2FA1L443 756 aa12.48□□□□□ -0.41
VSIG4-204ENST00000455586 SMG6Q86US8 1419 aaKnown RBP12.48□□□□□ -0.41
VSIG4-204ENST00000455586 NSD3Q9BZ95 1437 aa12.48□□□□□ -0.41
VSIG4-204ENST00000455586 PPP2R1AP30153 589 aa12.47□□□□□ -0.41
VSIG4-204ENST00000455586 CABP1Q9NZU7 370 aa12.47□□□□□ -0.41
VSIG4-204ENST00000455586 PTPRUQ92729 1446 aa12.47□□□□□ -0.41
VSIG4-204ENST00000455586 ARHGAP23Q9P227 1491 aa12.47□□□□□ -0.41
VSIG4-204ENST00000455586 PUS7Q96PZ0 661 aaKnown RBP12.46□□□□□ -0.41
VSIG4-204ENST00000455586 CEP170BQ9Y4F5 1589 aaPredicted RBP12.46□□□□□ -0.41
VSIG4-204ENST00000455586 RBM33Q96EV2 1170 aaKnown RBP12.46□□□□□ -0.42
VSIG4-204ENST00000455586 AMOTL2Q9Y2J4 779 aa12.46□□□□□ -0.42
VSIG4-204ENST00000455586 USP32Q8NFA0 1604 aa12.46□□□□□ -0.42
VSIG4-204ENST00000455586 SLIT1O75093 1534 aa12.45□□□□□ -0.42
VSIG4-204ENST00000455586 BLMP54132 1417 aaPredicted RBP12.45□□□□□ -0.42
VSIG4-204ENST00000455586 SALL2Q9Y467 1007 aaPredicted RBP12.45□□□□□ -0.42
VSIG4-204ENST00000455586 A0A1W2PP64 1363 aa12.44□□□□□ -0.42
VSIG4-204ENST00000455586 WASLO00401 505 aaPredicted RBP12.43□□□□□ -0.42
VSIG4-204ENST00000455586 DLC1Q96QB1 1528 aa12.43□□□□□ -0.42
VSIG4-204ENST00000455586 NUDCQ9Y266 331 aa12.43□□□□□ -0.42
VSIG4-204ENST00000455586 MED14O60244 1454 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 ANKRD36BQ8N2N9 1353 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 NINLQ9Y2I6 1382 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 MORC1Q86VD1 984 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 ANKLE2Q86XL3 938 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 GGNBP2Q9H3C7 697 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 TBX22Q9Y458 520 aa12.42□□□□□ -0.42
VSIG4-204ENST00000455586 KCNA6P17658 529 aa12.41□□□□□ -0.42
VSIG4-204ENST00000455586 CD163L1Q9NR16 1453 aa12.4□□□□□ -0.42
VSIG4-204ENST00000455586 TECPR2O15040 1411 aa12.4□□□□□ -0.42
VSIG4-204ENST00000455586 ATAD2Q6PL18 1390 aa12.4□□□□□ -0.42
VSIG4-204ENST00000455586 ERICH6BQ5W0A0 696 aa12.4□□□□□ -0.42
VSIG4-204ENST00000455586 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.4□□□□□ -0.42
VSIG4-204ENST00000455586 NUDT16Q96DE0 195 aaKnown RBP12.4□□□□□ -0.42
VSIG4-204ENST00000455586 PRR36Q9H6K5 1346 aa12.4□□□□□ -0.42
VSIG4-204ENST00000455586 FBLN1P23142 703 aa12.39□□□□□ -0.43
VSIG4-204ENST00000455586 ADAMTS8Q9UP79 889 aa12.39□□□□□ -0.43
VSIG4-204ENST00000455586 FAM135BQ49AJ0 1406 aa12.39□□□□□ -0.43
VSIG4-204ENST00000455586 CGNL1Q0VF96 1302 aa12.39□□□□□ -0.43
VSIG4-204ENST00000455586 WDR43Q15061 677 aaKnown RBP eCLIP12.39□□□□□ -0.43
VSIG4-204ENST00000455586 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.38□□□□□ -0.43
VSIG4-204ENST00000455586 PDE3BQ13370 1112 aa12.38□□□□□ -0.43
VSIG4-204ENST00000455586 TERF2IPQ9NYB0 399 aa12.38□□□□□ -0.43
VSIG4-204ENST00000455586 CPS1P31327 1500 aa12.38□□□□□ -0.43
VSIG4-204ENST00000455586 NSD2O96028 1365 aa12.38□□□□□ -0.43
VSIG4-204ENST00000455586 FYB1O15117 783 aa12.37□□□□□ -0.43
VSIG4-204ENST00000455586 SIRT1Q96EB6 747 aa12.37□□□□□ -0.43
VSIG4-204ENST00000455586 SETD1BQ9UPS6 1966 aaKnown RBP12.37□□□□□ -0.43
VSIG4-204ENST00000455586 HSPA2P54652 639 aa12.37□□□□□ -0.43
VSIG4-204ENST00000455586 HDGFL2Q7Z4V5 671 aaPredicted RBP12.37□□□□□ -0.43
VSIG4-204ENST00000455586 ZRANB1Q9UGI0 708 aa12.37□□□□□ -0.43
VSIG4-204ENST00000455586 PPIP5K1Q6PFW1 1433 aa12.37□□□□□ -0.43
VSIG4-204ENST00000455586 KNDC1Q76NI1 1749 aa12.36□□□□□ -0.43
VSIG4-204ENST00000455586 KDM4FA0A1W2PPD8 638 aa12.36□□□□□ -0.43
VSIG4-204ENST00000455586 CCDC146Q8IYE0 955 aa12.35□□□□□ -0.43
VSIG4-204ENST00000455586 PMFBP1Q8TBY8 1022 aa12.35□□□□□ -0.43
VSIG4-204ENST00000455586 CCDC61Q9Y6R9 512 aa12.35□□□□□ -0.43
VSIG4-204ENST00000455586 MTHFSP49914 203 aa12.35□□□□□ -0.43
VSIG4-204ENST00000455586 POLR3AO14802 1390 aaPredicted RBP12.34□□□□□ -0.43
VSIG4-204ENST00000455586 RNF123Q5XPI4 1314 aa12.34□□□□□ -0.43
VSIG4-204ENST00000455586 IRX6P78412 446 aaPredicted RBP12.34□□□□□ -0.43
VSIG4-204ENST00000455586 ZNF142P52746 1687 aaPredicted RBP12.34□□□□□ -0.43
VSIG4-204ENST00000455586 NME9Q86XW9 330 aa12.33□□□□□ -0.44
VSIG4-204ENST00000455586 ATP7BP35670 1465 aa12.33□□□□□ -0.44
VSIG4-204ENST00000455586 ANKRD26Q9UPS8 1709 aa12.32□□□□□ -0.44
VSIG4-204ENST00000455586 NPHP4O75161 1426 aaPredicted RBP12.32□□□□□ -0.44
VSIG4-204ENST00000455586 ACEP12821 1306 aa12.31□□□□□ -0.44
VSIG4-204ENST00000455586 SHPRHQ149N8 1683 aa12.31□□□□□ -0.44
VSIG4-204ENST00000455586 PTCH1Q13635 1447 aa12.3□□□□□ -0.44
VSIG4-204ENST00000455586 PPP4R2Q9NY27 417 aa12.3□□□□□ -0.44
VSIG4-204ENST00000455586 CPSF1Q10570 1443 aaKnown RBP12.3□□□□□ -0.44
VSIG4-204ENST00000455586 PPM1GO15355 546 aaPredicted RBP12.3□□□□□ -0.44
VSIG4-204ENST00000455586 CDCA7LQ96GN5 454 aa12.3□□□□□ -0.44
VSIG4-204ENST00000455586 DIP2AQ14689 1571 aa12.3□□□□□ -0.44
VSIG4-204ENST00000455586 NKTRP30414 1462 aaKnown RBP12.29□□□□□ -0.44
VSIG4-204ENST00000455586 XRN1Q8IZH2 1706 aaKnown RBP12.29□□□□□ -0.44
VSIG4-204ENST00000455586 KIF20BQ96Q89 1820 aa12.28□□□□□ -0.44
VSIG4-204ENST00000455586 SOX12O15370 315 aa12.28□□□□□ -0.44
VSIG4-204ENST00000455586 C14orf37Q86TY3 774 aa12.28□□□□□ -0.44
VSIG4-204ENST00000455586 NGEFQ8N5V2 710 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms