RNA–Protein interactions for RNA: ENST00000455551.6

SEMA4D-213, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 3,594 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-213ENST00000455551 CABP2Q9NPB3 220 aa15.96■□□□□ 0.14
SEMA4D-213ENST00000455551 POLR3AO14802 1390 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-213ENST00000455551 IDI1Q13907 227 aa15.95■□□□□ 0.14
SEMA4D-213ENST00000455551 KDM2BQ8NHM5 1336 aa15.95■□□□□ 0.14
SEMA4D-213ENST00000455551 VGFO15240 615 aaPredicted RBP15.95■□□□□ 0.14
SEMA4D-213ENST00000455551 ZC3H13Q5T200 1668 aaKnown RBP15.94■□□□□ 0.14
SEMA4D-213ENST00000455551 MTHFSP49914 203 aa15.94■□□□□ 0.14
SEMA4D-213ENST00000455551 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
SEMA4D-213ENST00000455551 GLI2P10070 1586 aa15.93■□□□□ 0.14
SEMA4D-213ENST00000455551 YEATS2Q9ULM3 1422 aa15.93■□□□□ 0.14
SEMA4D-213ENST00000455551 DIP2CQ9Y2E4 1556 aa15.93■□□□□ 0.14
SEMA4D-213ENST00000455551 CGNL1Q0VF96 1302 aa15.93■□□□□ 0.14
SEMA4D-213ENST00000455551 EVC2Q86UK5 1308 aa15.93■□□□□ 0.14
SEMA4D-213ENST00000455551 CENPQQ7L2Z9 268 aaPredicted RBP15.92■□□□□ 0.14
SEMA4D-213ENST00000455551 NEO1Q92859 1461 aa15.92■□□□□ 0.14
SEMA4D-213ENST00000455551 RGS3P49796 1198 aa15.91■□□□□ 0.14
SEMA4D-213ENST00000455551 NEXMIFQ5QGS0 1516 aa15.91■□□□□ 0.14
SEMA4D-213ENST00000455551 CANXP27824 592 aaKnown RBP15.91■□□□□ 0.14
SEMA4D-213ENST00000455551 TCP11L2Q8N4U5 519 aa15.91■□□□□ 0.14
SEMA4D-213ENST00000455551 TULP4Q9NRJ4 1543 aa15.9■□□□□ 0.14
SEMA4D-213ENST00000455551 RUNDC1Q96C34 613 aa15.9■□□□□ 0.14
SEMA4D-213ENST00000455551 SRPK2P78362 688 aaKnown RBP15.89■□□□□ 0.13
SEMA4D-213ENST00000455551 SHPRHQ149N8 1683 aa15.89■□□□□ 0.13
SEMA4D-213ENST00000455551 FRAT1Q92837 279 aaPredicted RBP15.89■□□□□ 0.13
SEMA4D-213ENST00000455551 CFAP53Q96M91 514 aa15.88■□□□□ 0.13
SEMA4D-213ENST00000455551 ARHGEF28Q8N1W1 1705 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-213ENST00000455551 CYB5RLQ6IPT4 315 aa15.88■□□□□ 0.13
SEMA4D-213ENST00000455551 PANK1Q8TE04 598 aa15.88■□□□□ 0.13
SEMA4D-213ENST00000455551 PIK3C2BO00750 1634 aa15.88■□□□□ 0.13
SEMA4D-213ENST00000455551 MINK1Q8N4C8 1332 aaPredicted RBP15.88■□□□□ 0.13
SEMA4D-213ENST00000455551 FBXO31Q5XUX0 539 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 BCL11AQ9H165 835 aa15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 LAS1LQ9Y4W2 734 aaKnown RBP15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 ANKRD36BQ8N2N9 1353 aa15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 U2AF1L5P0DN76 240 aaPredicted RBP15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 U2AF1Q01081 240 aaKnown RBP eCLIP15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 COG6Q9Y2V7 657 aa15.87■□□□□ 0.13
SEMA4D-213ENST00000455551 NGEFQ8N5V2 710 aa15.86■□□□□ 0.13
SEMA4D-213ENST00000455551 BCL2L13Q9BXK5 485 aa15.86■□□□□ 0.13
SEMA4D-213ENST00000455551 GGNBP2Q9H3C7 697 aa15.86■□□□□ 0.13
SEMA4D-213ENST00000455551 RICTORQ6R327 1708 aa15.85■□□□□ 0.13
SEMA4D-213ENST00000455551 MYO5BQ9ULV0 1848 aa15.85■□□□□ 0.13
SEMA4D-213ENST00000455551 DEKP35659 375 aaKnown RBP15.85■□□□□ 0.13
SEMA4D-213ENST00000455551 SLC52A1Q9NWF4 448 aa15.85■□□□□ 0.13
SEMA4D-213ENST00000455551 PRAM1Q96QH2 718 aa15.84■□□□□ 0.13
SEMA4D-213ENST00000455551 POGKQ9P215 609 aa15.84■□□□□ 0.13
SEMA4D-213ENST00000455551 A0A1W2PP64 1363 aa15.84■□□□□ 0.13
SEMA4D-213ENST00000455551 ARHGAP31Q2M1Z3 1444 aa15.83■□□□□ 0.13
SEMA4D-213ENST00000455551 IGHDP01880 384 aa15.83■□□□□ 0.12
SEMA4D-213ENST00000455551 RTL5Q5HYW3 569 aaPredicted RBP15.83■□□□□ 0.12
SEMA4D-213ENST00000455551 STAG3Q9UJ98 1225 aa15.83■□□□□ 0.12
SEMA4D-213ENST00000455551 TNNQ9UQP3 1299 aa15.83■□□□□ 0.12
SEMA4D-213ENST00000455551 U2SURPO15042 1029 aaKnown RBP15.82■□□□□ 0.12
SEMA4D-213ENST00000455551 IQSEC2Q5JU85 1478 aa15.82■□□□□ 0.12
SEMA4D-213ENST00000455551 USP32Q8NFA0 1604 aa15.81■□□□□ 0.12
SEMA4D-213ENST00000455551 RARSP54136 660 aaKnown RBP15.81■□□□□ 0.12
SEMA4D-213ENST00000455551 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
SEMA4D-213ENST00000455551 C8orf34Q49A92 452 aa15.81■□□□□ 0.12
SEMA4D-213ENST00000455551 SLC4A3P48751 1232 aa15.8■□□□□ 0.12
SEMA4D-213ENST00000455551 PDE3AQ14432 1141 aa15.8■□□□□ 0.12
SEMA4D-213ENST00000455551 FAM69CQ0P6D2 419 aa15.8■□□□□ 0.12
SEMA4D-213ENST00000455551 CLUAP1Q96AJ1 413 aa15.8■□□□□ 0.12
SEMA4D-213ENST00000455551 PUS7Q96PZ0 661 aaKnown RBP15.8■□□□□ 0.12
SEMA4D-213ENST00000455551 PREX1Q8TCU6 1659 aa15.79■□□□□ 0.12
SEMA4D-213ENST00000455551 NSD2O96028 1365 aa15.79■□□□□ 0.12
SEMA4D-213ENST00000455551 PHF23Q9BUL5 403 aaPredicted RBP15.79■□□□□ 0.12
SEMA4D-213ENST00000455551 RLBP1P12271 317 aa15.78■□□□□ 0.12
SEMA4D-213ENST00000455551 WDR63Q8IWG1 891 aa15.78■□□□□ 0.12
SEMA4D-213ENST00000455551 MLECQ14165 292 aa15.78■□□□□ 0.12
SEMA4D-213ENST00000455551 TMEM131LA2VDJ0 1609 aa15.78■□□□□ 0.12
SEMA4D-213ENST00000455551 YTHDC2Q9H6S0 1430 aaKnown RBP15.77■□□□□ 0.12
SEMA4D-213ENST00000455551 ABCC11Q96J66 1382 aa15.77■□□□□ 0.12
SEMA4D-213ENST00000455551 TSR2Q969E8 191 aaKnown RBP15.77■□□□□ 0.12
SEMA4D-213ENST00000455551 ZFYVE9O95405 1425 aa15.77■□□□□ 0.12
SEMA4D-213ENST00000455551 PTPRMP28827 1452 aa15.77■□□□□ 0.11
SEMA4D-213ENST00000455551 FYB1O15117 783 aa15.76■□□□□ 0.11
SEMA4D-213ENST00000455551 DDRGK1Q96HY6 314 aa15.76■□□□□ 0.11
SEMA4D-213ENST00000455551 TERF2IPQ9NYB0 399 aa15.76■□□□□ 0.11
SEMA4D-213ENST00000455551 CDK19Q9BWU1 502 aa15.75■□□□□ 0.11
SEMA4D-213ENST00000455551 MYH16Q9H6N6 1097 aa15.75■□□□□ 0.11
SEMA4D-213ENST00000455551 NEFMP07197 916 aa15.75■□□□□ 0.11
SEMA4D-213ENST00000455551 CCDC27Q2M243 656 aa15.75■□□□□ 0.11
SEMA4D-213ENST00000455551 CABP1Q9NZU7 370 aa15.75■□□□□ 0.11
SEMA4D-213ENST00000455551 ATAD2Q6PL18 1390 aa15.74■□□□□ 0.11
SEMA4D-213ENST00000455551 NINLQ9Y2I6 1382 aa15.74■□□□□ 0.11
SEMA4D-213ENST00000455551 TSPOAP1O95153 1857 aa15.74■□□□□ 0.11
SEMA4D-213ENST00000455551 FBLN1P23142 703 aa15.74■□□□□ 0.11
SEMA4D-213ENST00000455551 WAPLQ7Z5K2 1190 aa15.74■□□□□ 0.11
SEMA4D-213ENST00000455551 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.74■□□□□ 0.11
SEMA4D-213ENST00000455551 MAPK8IP3Q9UPT6 1336 aa15.73■□□□□ 0.11
SEMA4D-213ENST00000455551 PPM1GO15355 546 aaPredicted RBP15.73■□□□□ 0.11
SEMA4D-213ENST00000455551 HDGFL2Q7Z4V5 671 aaPredicted RBP15.72■□□□□ 0.11
SEMA4D-213ENST00000455551 PCDHB15Q9Y5E8 787 aa15.72■□□□□ 0.11
SEMA4D-213ENST00000455551 DAXXQ9UER7 740 aaPredicted RBP15.72■□□□□ 0.11
SEMA4D-213ENST00000455551 CD163L1Q9NR16 1453 aa15.72■□□□□ 0.11
SEMA4D-213ENST00000455551 TMPOP42166 694 aaKnown RBP15.71■□□□□ 0.11
SEMA4D-213ENST00000455551 ALKQ9UM73 1620 aa15.71■□□□□ 0.11
SEMA4D-213ENST00000455551 EXOSC9Q06265 439 aaKnown RBP15.71■□□□□ 0.1
SEMA4D-213ENST00000455551 PLEKHF1Q96S99 279 aa15.71■□□□□ 0.1
SEMA4D-213ENST00000455551 TRIM35Q9UPQ4 493 aa15.69■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms