RNA–Protein interactions for RNA: ENST00000454040.5

PCGEM1-201, PCGEM1, prostate-specific transcript, humanhuman

TSL 1 (best) BASIC

Gene PCGEM1, Length 1,590 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGEM1-201ENST00000454040 CFHP08603 1231 aa8.96□□□□□ -0.97
PCGEM1-201ENST00000454040 GSK3AP49840 483 aa8.96□□□□□ -0.97
PCGEM1-201ENST00000454040 BRPF1P55201 1214 aaPredicted RBP8.96□□□□□ -0.97
PCGEM1-201ENST00000454040 SPSB2Q99619 263 aa8.96□□□□□ -0.97
PCGEM1-201ENST00000454040 SCUBE3Q8IX30 993 aa8.95□□□□□ -0.98
PCGEM1-201ENST00000454040 TMEM151AQ8N4L1 468 aa8.95□□□□□ -0.98
PCGEM1-201ENST00000454040 DNAJB2P25686 324 aa8.95□□□□□ -0.98
PCGEM1-201ENST00000454040 WNT7AO00755 349 aa8.94□□□□□ -0.98
PCGEM1-201ENST00000454040 FCF1Q9Y324 198 aaKnown RBP8.94□□□□□ -0.98
PCGEM1-201ENST00000454040 OSBPP22059 807 aa8.93□□□□□ -0.98
PCGEM1-201ENST00000454040 XP32Q5T750 250 aa8.92□□□□□ -0.98
PCGEM1-201ENST00000454040 NPDC1Q9NQX5 325 aaPredicted RBP8.92□□□□□ -0.98
PCGEM1-201ENST00000454040 ERBB4Q15303 1308 aa8.92□□□□□ -0.98
PCGEM1-201ENST00000454040 TMEM134Q9H6X4 195 aa8.9□□□□□ -0.98
PCGEM1-201ENST00000454040 J3QL48 77 aa8.9□□□□□ -0.99
PCGEM1-201ENST00000454040 ZBTB24O43167 697 aaPredicted RBP8.9□□□□□ -0.99
PCGEM1-201ENST00000454040 GDF11O95390 407 aa8.9□□□□□ -0.99
PCGEM1-201ENST00000454040 HPS1Q92902 700 aa8.9□□□□□ -0.99
PCGEM1-201ENST00000454040 VEGFBP49765 207 aa8.89□□□□□ -0.99
PCGEM1-201ENST00000454040 DCAF1Q9Y4B6 1507 aa8.87□□□□□ -0.99
PCGEM1-201ENST00000454040 RASSF7Q02833 373 aa8.87□□□□□ -0.99
PCGEM1-201ENST00000454040 KRTAP4-8Q9BYQ9 185 aa8.87□□□□□ -0.99
PCGEM1-201ENST00000454040 RBM46Q8TBY0 533 aaKnown RBP8.85□□□□□ -0.99
PCGEM1-201ENST00000454040 MRGPRX2Q96LB1 330 aa8.85□□□□□ -0.99
PCGEM1-201ENST00000454040 SLC10A3P09131 477 aa8.84□□□□□ -0.99
PCGEM1-201ENST00000454040 RNF225M0QZC1 329 aaPredicted RBP8.82□□□□□ -1
PCGEM1-201ENST00000454040 REPIN1Q9BWE0 567 aaKnown RBP8.82□□□□□ -1
PCGEM1-201ENST00000454040 IGHA1P01876 353 aa8.82□□□□□ -1
PCGEM1-201ENST00000454040 PUS10Q3MIT2 529 aaKnown RBP8.82□□□□□ -1
PCGEM1-201ENST00000454040 ARIH1Q9Y4X5 557 aaPredicted RBP8.81□□□□□ -1
PCGEM1-201ENST00000454040 RCCD1A6NED2 376 aa8.79□□□□□ -1
PCGEM1-201ENST00000454040 VSIG8P0DPA2 414 aa8.79□□□□□ -1
PCGEM1-201ENST00000454040 FAM160A2Q8N612 972 aaPredicted RBP8.79□□□□□ -1
PCGEM1-201ENST00000454040 THAP11Q96EK4 314 aa8.78□□□□□ -1
PCGEM1-201ENST00000454040 TRIM32Q13049 653 aa8.78□□□□□ -1
PCGEM1-201ENST00000454040 NEUROD2Q15784 382 aa8.78□□□□□ -1
PCGEM1-201ENST00000454040 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.78□□□□□ -1
PCGEM1-201ENST00000454040 EIF5BO60841 1220 aaKnown RBP8.77□□□□□ -1.01
PCGEM1-201ENST00000454040 RSPH4AQ5TD94 716 aa8.77□□□□□ -1.01
PCGEM1-201ENST00000454040 TRIM46Q7Z4K8 759 aa8.77□□□□□ -1.01
PCGEM1-201ENST00000454040 LOC105371045A0A1W2PR82 267 aa8.76□□□□□ -1.01
PCGEM1-201ENST00000454040 FMNL1O95466 1100 aaPredicted RBP8.76□□□□□ -1.01
PCGEM1-201ENST00000454040 ZMYND15Q9H091 742 aa8.75□□□□□ -1.01
PCGEM1-201ENST00000454040 ADGRG1Q9Y653 693 aa8.75□□□□□ -1.01
PCGEM1-201ENST00000454040 SHROOM4Q9ULL8 1493 aa8.75□□□□□ -1.01
PCGEM1-201ENST00000454040 GPAT2Q6NUI2 795 aa8.74□□□□□ -1.01
PCGEM1-201ENST00000454040 ARID3AQ99856 593 aa8.74□□□□□ -1.01
PCGEM1-201ENST00000454040 BMP1P13497 986 aa8.73□□□□□ -1.01
PCGEM1-201ENST00000454040 MORN1Q5T089 497 aa8.73□□□□□ -1.01
PCGEM1-201ENST00000454040 C1orf115Q9H7X2 142 aa8.73□□□□□ -1.01
PCGEM1-201ENST00000454040 DNMT3AQ9Y6K1 912 aaPredicted RBP8.73□□□□□ -1.01
PCGEM1-201ENST00000454040 KRTAP9-1A8MXZ3 250 aaPredicted RBP8.73□□□□□ -1.01
PCGEM1-201ENST00000454040 RSPH6AQ9H0K4 717 aa8.73□□□□□ -1.01
PCGEM1-201ENST00000454040 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.72□□□□□ -1.01
PCGEM1-201ENST00000454040 PRDM9Q9NQV7 894 aa8.72□□□□□ -1.01
PCGEM1-201ENST00000454040 SALL2Q9Y467 1007 aaPredicted RBP8.72□□□□□ -1.01
PCGEM1-201ENST00000454040 CAPN5O15484 640 aaPredicted RBP8.71□□□□□ -1.02
PCGEM1-201ENST00000454040 FOXK2Q01167 660 aa8.71□□□□□ -1.02
PCGEM1-201ENST00000454040 E2F4Q16254 413 aa8.7□□□□□ -1.02
PCGEM1-201ENST00000454040 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
PCGEM1-201ENST00000454040 KRTAP9-2Q9BYQ4 174 aa8.7□□□□□ -1.02
PCGEM1-201ENST00000454040 CCDC9Q9Y3X0 531 aaKnown RBP8.7□□□□□ -1.02
PCGEM1-201ENST00000454040 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
PCGEM1-201ENST00000454040 ADAMTS8Q9UP79 889 aa8.69□□□□□ -1.02
PCGEM1-201ENST00000454040 RC3H1Q5TC82 1133 aaKnown RBP8.69□□□□□ -1.02
PCGEM1-201ENST00000454040 ALDH1A1P00352 501 aa8.68□□□□□ -1.02
PCGEM1-201ENST00000454040 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
PCGEM1-201ENST00000454040 MYO15BQ96JP2 1530 aa8.67□□□□□ -1.02
PCGEM1-201ENST00000454040 ZFP42Q96MM3 310 aa8.67□□□□□ -1.02
PCGEM1-201ENST00000454040 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
PCGEM1-201ENST00000454040 FECHP22830 423 aa8.65□□□□□ -1.02
PCGEM1-201ENST00000454040 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
PCGEM1-201ENST00000454040 WNT7BP56706 349 aa8.65□□□□□ -1.02
PCGEM1-201ENST00000454040 SLC24A3Q9HC58 644 aa8.65□□□□□ -1.02
PCGEM1-201ENST00000454040 SLC27A5Q9Y2P5 690 aa8.65□□□□□ -1.02
PCGEM1-201ENST00000454040 ZC3H15Q8WU90 426 aaKnown RBP8.65□□□□□ -1.03
PCGEM1-201ENST00000454040 PTGDRQ13258 359 aa8.64□□□□□ -1.03
PCGEM1-201ENST00000454040 ZBTB7CA1YPR0 619 aa8.63□□□□□ -1.03
PCGEM1-201ENST00000454040 ADAM23O75077 832 aa8.62□□□□□ -1.03
PCGEM1-201ENST00000454040 FUT2Q10981 343 aa8.62□□□□□ -1.03
PCGEM1-201ENST00000454040 MMP16P51512 607 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 SKOR1P84550 965 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 P3H3Q8IVL6 736 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 FAM161AQ3B820 660 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 KANK3Q6NY19 840 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 KCNV2Q8TDN2 545 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 WASF2Q9Y6W5 498 aa8.61□□□□□ -1.03
PCGEM1-201ENST00000454040 KRTAP1-3Q8IUG1 177 aa8.6□□□□□ -1.03
PCGEM1-201ENST00000454040 PDIA4P13667 645 aaKnown RBP8.59□□□□□ -1.03
PCGEM1-201ENST00000454040 IRS1P35568 1242 aa8.59□□□□□ -1.03
PCGEM1-201ENST00000454040 ARID3CA6NKF2 412 aa8.57□□□□□ -1.04
PCGEM1-201ENST00000454040 SIAH2O43255 324 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 IGSF3O75054 1194 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 OATP04181 439 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 SCARF1Q14162 830 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 PXYLP1Q8TE99 480 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 RNF19BQ6ZMZ0 732 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 RDH13Q8NBN7 331 aa8.56□□□□□ -1.04
PCGEM1-201ENST00000454040 MRPL14Q6P1L8 145 aaKnown RBP8.55□□□□□ -1.04
PCGEM1-201ENST00000454040 PPFIA3O75145 1194 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 91.4 ms