RNA–Protein interactions for RNA: ENST00000453847.2

HMGN3P1-201, Transcript of high mobility group nucleosomal binding domain 3 pseudogene 1, humanhuman

BASIC

Gene HMGN3P1, Length 193 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3P1-201ENST00000453847 TMCO4Q5TGY1 634 aa7.3□□□□□ -1.24
HMGN3P1-201ENST00000453847 ZBED2Q9BTP6 218 aa7.3□□□□□ -1.24
HMGN3P1-201ENST00000453847 PALM3A6NDB9 673 aaPredicted RBP7.29□□□□□ -1.24
HMGN3P1-201ENST00000453847 MTMR2Q13614 643 aa7.29□□□□□ -1.24
HMGN3P1-201ENST00000453847 PRR7Q8TB68 274 aa7.29□□□□□ -1.24
HMGN3P1-201ENST00000453847 ZNF428Q96B54 188 aa7.29□□□□□ -1.24
HMGN3P1-201ENST00000453847 FOXD4L5Q5VV16 416 aaPredicted RBP7.28□□□□□ -1.24
HMGN3P1-201ENST00000453847 FOXD4L4Q8WXT5 416 aaPredicted RBP7.28□□□□□ -1.24
HMGN3P1-201ENST00000453847 SYMPKQ92797 1274 aaKnown RBP7.28□□□□□ -1.24
HMGN3P1-201ENST00000453847 KCNK17Q96T54 332 aa7.28□□□□□ -1.24
HMGN3P1-201ENST00000453847 TFIP11Q9UBB9 837 aaKnown RBP7.28□□□□□ -1.24
HMGN3P1-201ENST00000453847 BRD1O95696 1058 aa7.27□□□□□ -1.25
HMGN3P1-201ENST00000453847 HOXB1P14653 301 aaPredicted RBP7.27□□□□□ -1.25
HMGN3P1-201ENST00000453847 USTQ9Y2C2 406 aa7.27□□□□□ -1.25
HMGN3P1-201ENST00000453847 TMEM88BA6NKF7 163 aa7.26□□□□□ -1.25
HMGN3P1-201ENST00000453847 PER1O15534 1290 aaPredicted RBP7.26□□□□□ -1.25
HMGN3P1-201ENST00000453847 LMOD1P29536 600 aaPredicted RBP7.26□□□□□ -1.25
HMGN3P1-201ENST00000453847 PDE4CQ08493 712 aa7.26□□□□□ -1.25
HMGN3P1-201ENST00000453847 FUT2Q10981 343 aa7.26□□□□□ -1.25
HMGN3P1-201ENST00000453847 POTEEQ6S8J3 1075 aa7.26□□□□□ -1.25
HMGN3P1-201ENST00000453847 PSEN2P49810 448 aa7.25□□□□□ -1.25
HMGN3P1-201ENST00000453847 KCNA1Q09470 495 aa7.25□□□□□ -1.25
HMGN3P1-201ENST00000453847 NR6A1Q15406 480 aa7.25□□□□□ -1.25
HMGN3P1-201ENST00000453847 CDCA8Q53HL2 280 aa7.25□□□□□ -1.25
HMGN3P1-201ENST00000453847 SEPT9Q9UHD8 586 aaPredicted RBP7.25□□□□□ -1.25
HMGN3P1-201ENST00000453847 RSPH4AQ5TD94 716 aa7.24□□□□□ -1.25
HMGN3P1-201ENST00000453847 TBC1D9Q6ZT07 1266 aa7.24□□□□□ -1.25
HMGN3P1-201ENST00000453847 HELBQ8NG08 1087 aaPredicted RBP7.24□□□□□ -1.25
HMGN3P1-201ENST00000453847 C6orf229H3BNL8 230 aa7.23□□□□□ -1.25
HMGN3P1-201ENST00000453847 ATG7O95352 703 aa7.23□□□□□ -1.25
HMGN3P1-201ENST00000453847 CSB-PGBD3P0DP91 1061 aa7.23□□□□□ -1.25
HMGN3P1-201ENST00000453847 TSC1Q92574 1164 aa7.23□□□□□ -1.25
HMGN3P1-201ENST00000453847 MAFBQ9Y5Q3 323 aaPredicted RBP7.23□□□□□ -1.25
HMGN3P1-201ENST00000453847 DMRTA1Q5VZB9 504 aa7.22□□□□□ -1.25
HMGN3P1-201ENST00000453847 SLF2Q8IX21 1173 aa7.22□□□□□ -1.25
HMGN3P1-201ENST00000453847 SP7Q8TDD2 431 aaPredicted RBP7.22□□□□□ -1.25
HMGN3P1-201ENST00000453847 RABGEF1Q9UJ41 708 aa7.22□□□□□ -1.25
HMGN3P1-201ENST00000453847 KANK4Q5T7N3 995 aaPredicted RBP7.21□□□□□ -1.26
HMGN3P1-201ENST00000453847 VRTNQ9H8Y1 702 aa7.21□□□□□ -1.26
HMGN3P1-201ENST00000453847 ATP6V1AP38606 617 aa7.2□□□□□ -1.26
HMGN3P1-201ENST00000453847 SAMD7Q7Z3H4 446 aa7.2□□□□□ -1.26
HMGN3P1-201ENST00000453847 SLC4A5Q9BY07 1137 aa7.2□□□□□ -1.26
HMGN3P1-201ENST00000453847 IVNS1ABPQ9Y6Y0 642 aa7.2□□□□□ -1.26
HMGN3P1-201ENST00000453847 PATL2C9JE40 543 aaKnown RBP7.19□□□□□ -1.26
HMGN3P1-201ENST00000453847 CFHP08603 1231 aa7.19□□□□□ -1.26
HMGN3P1-201ENST00000453847 SOX11P35716 441 aa7.19□□□□□ -1.26
HMGN3P1-201ENST00000453847 MORN1Q5T089 497 aa7.19□□□□□ -1.26
HMGN3P1-201ENST00000453847 POTEHQ6S545 545 aa7.19□□□□□ -1.26
HMGN3P1-201ENST00000453847 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
HMGN3P1-201ENST00000453847 SEMA3FQ13275 785 aa7.18□□□□□ -1.26
HMGN3P1-201ENST00000453847 FAM98CQ17RN3 349 aaKnown RBP7.18□□□□□ -1.26
HMGN3P1-201ENST00000453847 ATP9BO43861 1147 aa7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 RBM25P49756 843 aaKnown RBP7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 GRIPAP1Q4V328 841 aa7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 LYPD8Q6UX82 237 aa7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 RETREG3Q86VR2 466 aa7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 SLC27A5Q9Y2P5 690 aa7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 AXIN2Q9Y2T1 843 aa7.17□□□□□ -1.26
HMGN3P1-201ENST00000453847 ARHGAP33O14559 1287 aa7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 PUS10Q3MIT2 529 aaKnown RBP7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 DESI1Q6ICB0 168 aa7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 PHLDB3Q6NSJ2 640 aa7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 SLAIN2Q9P270 581 aa7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 ZMIZ1Q9ULJ6 1067 aa7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 VPS9D1Q9Y2B5 631 aa7.16□□□□□ -1.26
HMGN3P1-201ENST00000453847 BHMG1C9JSJ3 638 aaPredicted RBP7.15□□□□□ -1.26
HMGN3P1-201ENST00000453847 FBXO45P0C2W1 286 aa7.15□□□□□ -1.26
HMGN3P1-201ENST00000453847 NR1H3Q13133 447 aa7.15□□□□□ -1.26
HMGN3P1-201ENST00000453847 SCUBE2Q9NQ36 999 aa7.15□□□□□ -1.26
HMGN3P1-201ENST00000453847 ELOAQ14241 798 aaKnown RBP7.14□□□□□ -1.27
HMGN3P1-201ENST00000453847 BLOC1S3Q6QNY0 202 aa7.14□□□□□ -1.27
HMGN3P1-201ENST00000453847 SND1Q7KZF4 910 aaKnown RBP eCLIP7.14□□□□□ -1.27
HMGN3P1-201ENST00000453847 STK32AQ8WU08 396 aa7.14□□□□□ -1.27
HMGN3P1-201ENST00000453847 F12P00748 615 aaPredicted RBP7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 HDGFP51858 240 aaKnown RBP7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 EIF4G2P78344 907 aaKnown RBP eCLIP7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 TMEM164Q5U3C3 297 aa7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 RNF19BQ6ZMZ0 732 aa7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 MAMSTRQ6ZN01 415 aa7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 FAM174AQ8TBP5 190 aa7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 GNEQ9Y223 722 aaKnown RBP7.13□□□□□ -1.27
HMGN3P1-201ENST00000453847 SNPHO15079 494 aa7.12□□□□□ -1.27
HMGN3P1-201ENST00000453847 ACTN4O43707 911 aaKnown RBP7.12□□□□□ -1.27
HMGN3P1-201ENST00000453847 CCDC27Q2M243 656 aa7.11□□□□□ -1.27
HMGN3P1-201ENST00000453847 BRICD5Q6PL45 260 aa7.11□□□□□ -1.27
HMGN3P1-201ENST00000453847 LAPTM4BQ86VI4 370 aa7.11□□□□□ -1.27
HMGN3P1-201ENST00000453847 TXNDC2Q86VQ3 553 aa7.11□□□□□ -1.27
HMGN3P1-201ENST00000453847 KCNH8Q96L42 1107 aa7.11□□□□□ -1.27
HMGN3P1-201ENST00000453847 ZBBXA8MT70 800 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 FAM69CQ0P6D2 419 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 VARS2Q5ST30 1063 aaKnown RBP7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 NFATC2IPQ8NCF5 419 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 PNMA1Q8ND90 353 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 THAP11Q96EK4 314 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 ZFRQ96KR1 1074 aaKnown RBP7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 OCSTAMPQ9BR26 566 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 FKBPLQ9UIM3 349 aa7.1□□□□□ -1.27
HMGN3P1-201ENST00000453847 USP17L3A6NCW0 530 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 USP17L4A6NCW7 530 aa7.09□□□□□ -1.27
HMGN3P1-201ENST00000453847 KMT5BQ4FZB7 885 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms