RNA–Protein interactions for RNA: ENST00000453727.6

LMO3-210, Transcript of LIM domain only 3, humanhuman

TSL 5

Gene LMO3, Length 2,403 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-210ENST00000453727 CDCA8Q53HL2 280 aa11.53□□□□□ -0.56
LMO3-210ENST00000453727 MYOM1P52179 1685 aa11.53□□□□□ -0.56
LMO3-210ENST00000453727 SLC24A1O60721 1099 aa11.52□□□□□ -0.56
LMO3-210ENST00000453727 SAFB2Q14151 953 aaKnown RBP eCLIP11.52□□□□□ -0.57
LMO3-210ENST00000453727 LRPPRCP42704 1394 aaKnown RBP11.52□□□□□ -0.57
LMO3-210ENST00000453727 MED14O60244 1454 aa11.51□□□□□ -0.57
LMO3-210ENST00000453727 PRAM1Q96QH2 718 aa11.51□□□□□ -0.57
LMO3-210ENST00000453727 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.51□□□□□ -0.57
LMO3-210ENST00000453727 TBX22Q9Y458 520 aa11.51□□□□□ -0.57
LMO3-210ENST00000453727 ABCC11Q96J66 1382 aa11.51□□□□□ -0.57
LMO3-210ENST00000453727 CNGB1Q14028 1251 aaPredicted RBP11.5□□□□□ -0.57
LMO3-210ENST00000453727 PANK3Q9H999 370 aa11.5□□□□□ -0.57
LMO3-210ENST00000453727 POGKQ9P215 609 aa11.5□□□□□ -0.57
LMO3-210ENST00000453727 PER1O15534 1290 aaPredicted RBP11.49□□□□□ -0.57
LMO3-210ENST00000453727 TULP4Q9NRJ4 1543 aa11.49□□□□□ -0.57
LMO3-210ENST00000453727 WAPLQ7Z5K2 1190 aa11.49□□□□□ -0.57
LMO3-210ENST00000453727 POTEDQ86YR6 584 aa11.49□□□□□ -0.57
LMO3-210ENST00000453727 DIP2AQ14689 1571 aa11.48□□□□□ -0.57
LMO3-210ENST00000453727 DLC1Q96QB1 1528 aa11.48□□□□□ -0.57
LMO3-210ENST00000453727 NCKAP5LQ9HCH0 1330 aa11.48□□□□□ -0.57
LMO3-210ENST00000453727 HSPA2P54652 639 aa11.48□□□□□ -0.57
LMO3-210ENST00000453727 TECPR2O15040 1411 aa11.47□□□□□ -0.57
LMO3-210ENST00000453727 NBR1Q14596 966 aa11.47□□□□□ -0.57
LMO3-210ENST00000453727 KNDC1Q76NI1 1749 aa11.47□□□□□ -0.57
LMO3-210ENST00000453727 CCDC184Q52MB2 194 aa11.47□□□□□ -0.57
LMO3-210ENST00000453727 AMOTL2Q9Y2J4 779 aa11.47□□□□□ -0.57
LMO3-210ENST00000453727 PLEKHH1Q9ULM0 1364 aa11.47□□□□□ -0.57
LMO3-210ENST00000453727 MINK1Q8N4C8 1332 aaPredicted RBP11.46□□□□□ -0.57
LMO3-210ENST00000453727 NPHP4O75161 1426 aaPredicted RBP11.46□□□□□ -0.57
LMO3-210ENST00000453727 PTPRUQ92729 1446 aa11.46□□□□□ -0.57
LMO3-210ENST00000453727 PKNOX2Q96KN3 472 aa11.46□□□□□ -0.57
LMO3-210ENST00000453727 EVC2Q86UK5 1308 aa11.46□□□□□ -0.57
LMO3-210ENST00000453727 LMTK3Q96Q04 1460 aa11.46□□□□□ -0.58
LMO3-210ENST00000453727 ROBO2Q9HCK4 1378 aa11.45□□□□□ -0.58
LMO3-210ENST00000453727 SIRT1Q96EB6 747 aa11.45□□□□□ -0.58
LMO3-210ENST00000453727 CPS1P31327 1500 aa11.45□□□□□ -0.58
LMO3-210ENST00000453727 FAM135BQ49AJ0 1406 aa11.45□□□□□ -0.58
LMO3-210ENST00000453727 RTL5Q5HYW3 569 aaPredicted RBP11.45□□□□□ -0.58
LMO3-210ENST00000453727 RTN4Q9NQC3 1192 aaKnown RBP11.45□□□□□ -0.58
LMO3-210ENST00000453727 PIK3R4Q99570 1358 aa11.44□□□□□ -0.58
LMO3-210ENST00000453727 CABP2Q9NPB3 220 aa11.44□□□□□ -0.58
LMO3-210ENST00000453727 IL27Q8NEV9 243 aa11.44□□□□□ -0.58
LMO3-210ENST00000453727 KTN1Q86UP2 1357 aaKnown RBP11.43□□□□□ -0.58
LMO3-210ENST00000453727 SRPK2P78362 688 aaKnown RBP11.43□□□□□ -0.58
LMO3-210ENST00000453727 PUS7Q96PZ0 661 aaKnown RBP11.43□□□□□ -0.58
LMO3-210ENST00000453727 PARD3Q8TEW0 1356 aa11.43□□□□□ -0.58
LMO3-210ENST00000453727 KCNA6P17658 529 aa11.43□□□□□ -0.58
LMO3-210ENST00000453727 RALBP1Q15311 655 aa11.43□□□□□ -0.58
LMO3-210ENST00000453727 CC2D1BQ5T0F9 858 aaKnown RBP11.43□□□□□ -0.58
LMO3-210ENST00000453727 TMC1Q8TDI8 760 aa11.43□□□□□ -0.58
LMO3-210ENST00000453727 SLC12A5Q9H2X9 1139 aa11.43□□□□□ -0.58
LMO3-210ENST00000453727 KNSTRNQ9Y448 316 aa11.43□□□□□ -0.58
LMO3-210ENST00000453727 MRS2Q9HD23 443 aa11.42□□□□□ -0.58
LMO3-210ENST00000453727 PTCH1Q13635 1447 aa11.41□□□□□ -0.58
LMO3-210ENST00000453727 XRN1Q8IZH2 1706 aaKnown RBP11.41□□□□□ -0.58
LMO3-210ENST00000453727 CDK19Q9BWU1 502 aa11.41□□□□□ -0.58
LMO3-210ENST00000453727 CARD14Q9BXL6 1004 aa11.41□□□□□ -0.58
LMO3-210ENST00000453727 NOP58Q9Y2X3 529 aaKnown RBP11.41□□□□□ -0.58
LMO3-210ENST00000453727 CHD2O14647 1828 aaKnown RBP11.41□□□□□ -0.58
LMO3-210ENST00000453727 AMER1Q5JTC6 1135 aaPredicted RBP11.4□□□□□ -0.58
LMO3-210ENST00000453727 MYBBP1AQ9BQG0 1328 aaKnown RBP11.4□□□□□ -0.58
LMO3-210ENST00000453727 WASLO00401 505 aaPredicted RBP11.39□□□□□ -0.59
LMO3-210ENST00000453727 ATAD2Q6PL18 1390 aa11.38□□□□□ -0.59
LMO3-210ENST00000453727 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.38□□□□□ -0.59
LMO3-210ENST00000453727 NPC1L1Q9UHC9 1359 aa11.37□□□□□ -0.59
LMO3-210ENST00000453727 STRCQ7RTU9 1775 aa11.37□□□□□ -0.59
LMO3-210ENST00000453727 NSD3Q9BZ95 1437 aa11.37□□□□□ -0.59
LMO3-210ENST00000453727 ANKRD36BQ8N2N9 1353 aa11.37□□□□□ -0.59
LMO3-210ENST00000453727 FAM9BQ8IZU0 186 aa11.37□□□□□ -0.59
LMO3-210ENST00000453727 NINLQ9Y2I6 1382 aa11.36□□□□□ -0.59
LMO3-210ENST00000453727 RBM33Q96EV2 1170 aaKnown RBP11.36□□□□□ -0.59
LMO3-210ENST00000453727 BRD4O60885 1362 aaPredicted RBP11.36□□□□□ -0.59
LMO3-210ENST00000453727 ADGRB2O60241 1585 aa11.36□□□□□ -0.59
LMO3-210ENST00000453727 NLRP13Q86W25 1043 aa11.35□□□□□ -0.59
LMO3-210ENST00000453727 CABP1Q9NZU7 370 aa11.35□□□□□ -0.59
LMO3-210ENST00000453727 A0A1W2PP64 1363 aa11.35□□□□□ -0.59
LMO3-210ENST00000453727 USP32Q8NFA0 1604 aa11.35□□□□□ -0.59
LMO3-210ENST00000453727 CD163L1Q9NR16 1453 aa11.35□□□□□ -0.59
LMO3-210ENST00000453727 NUTM2FA1L443 756 aa11.35□□□□□ -0.59
LMO3-210ENST00000453727 NWD1Q149M9 1564 aa11.34□□□□□ -0.59
LMO3-210ENST00000453727 NUDT16Q96DE0 195 aaKnown RBP11.34□□□□□ -0.59
LMO3-210ENST00000453727 CCDC61Q9Y6R9 512 aa11.34□□□□□ -0.59
LMO3-210ENST00000453727 PNISRQ8TF01 805 aaKnown RBP11.33□□□□□ -0.6
LMO3-210ENST00000453727 ATP7BP35670 1465 aa11.33□□□□□ -0.6
LMO3-210ENST00000453727 PPP2R1AP30153 589 aa11.33□□□□□ -0.6
LMO3-210ENST00000453727 PROSER2Q86WR7 435 aaPredicted RBP11.33□□□□□ -0.6
LMO3-210ENST00000453727 TERF2IPQ9NYB0 399 aa11.33□□□□□ -0.6
LMO3-210ENST00000453727 PRR36Q9H6K5 1346 aa11.32□□□□□ -0.6
LMO3-210ENST00000453727 C14orf37Q86TY3 774 aa11.32□□□□□ -0.6
LMO3-210ENST00000453727 DAXXQ9UER7 740 aaPredicted RBP11.32□□□□□ -0.6
LMO3-210ENST00000453727 PPIP5K1Q6PFW1 1433 aa11.32□□□□□ -0.6
LMO3-210ENST00000453727 NKTRP30414 1462 aaKnown RBP11.32□□□□□ -0.6
LMO3-210ENST00000453727 HNRNPUQ00839 825 aaKnown RBP eCLIP11.31□□□□□ -0.6
LMO3-210ENST00000453727 CGNL1Q0VF96 1302 aa11.31□□□□□ -0.6
LMO3-210ENST00000453727 NALCNQ8IZF0 1738 aa11.31□□□□□ -0.6
LMO3-210ENST00000453727 ADGRL3Q9HAR2 1447 aa11.3□□□□□ -0.6
LMO3-210ENST00000453727 HDGFL2Q7Z4V5 671 aaPredicted RBP11.3□□□□□ -0.6
LMO3-210ENST00000453727 STRCP1A6NGW2 1772 aa11.3□□□□□ -0.6
LMO3-210ENST00000453727 GLIPR1L2Q4G1C9 344 aa11.3□□□□□ -0.6
LMO3-210ENST00000453727 TOPAZ1Q8N9V7 1692 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms