RNA–Protein interactions for RNA: ENST00000453555.1

CDC42EP3-203, Transcript of CDC42 effector protein 3, humanhuman

TSL 3

Gene CDC42EP3, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP3-203ENST00000453555 SPDYE2BA6NHP3 402 aa13.91□□□□□ -0.18
CDC42EP3-203ENST00000453555 SPDYE6P0CI01 402 aa13.91□□□□□ -0.18
CDC42EP3-203ENST00000453555 SPDYE2Q495Y8 402 aa13.91□□□□□ -0.18
CDC42EP3-203ENST00000453555 ATF3P18847 181 aa13.9□□□□□ -0.18
CDC42EP3-203ENST00000453555 ANKRD30BQ9BXX2 1392 aa13.9□□□□□ -0.18
CDC42EP3-203ENST00000453555 MED1Q15648 1581 aaPredicted RBP13.89□□□□□ -0.19
CDC42EP3-203ENST00000453555 CADPS2Q86UW7 1296 aa13.88□□□□□ -0.19
CDC42EP3-203ENST00000453555 ROBO2Q9HCK4 1378 aa13.87□□□□□ -0.19
CDC42EP3-203ENST00000453555 PIK3C2GO75747 1445 aa13.87□□□□□ -0.19
CDC42EP3-203ENST00000453555 TMEM132EQ6IEE7 984 aa13.86□□□□□ -0.19
CDC42EP3-203ENST00000453555 STK26Q9P289 416 aa13.86□□□□□ -0.19
CDC42EP3-203ENST00000453555 ADGRL3Q9HAR2 1447 aa13.86□□□□□ -0.19
CDC42EP3-203ENST00000453555 ASXL1Q8IXJ9 1541 aa13.85□□□□□ -0.19
CDC42EP3-203ENST00000453555 DCCP43146 1447 aa13.85□□□□□ -0.19
CDC42EP3-203ENST00000453555 PTCH1Q13635 1447 aa13.85□□□□□ -0.19
CDC42EP3-203ENST00000453555 KNDC1Q76NI1 1749 aa13.84□□□□□ -0.19
CDC42EP3-203ENST00000453555 LAMC1P11047 1609 aa13.84□□□□□ -0.19
CDC42EP3-203ENST00000453555 PITPNM1O00562 1244 aa13.84□□□□□ -0.19
CDC42EP3-203ENST00000453555 MYOM2P54296 1465 aa13.84□□□□□ -0.19
CDC42EP3-203ENST00000453555 MST1RQ04912 1400 aa13.83□□□□□ -0.2
CDC42EP3-203ENST00000453555 NRXN1Q9ULB1 1477 aa13.83□□□□□ -0.2
CDC42EP3-203ENST00000453555 CFAP70Q5T0N1 1121 aa13.83□□□□□ -0.2
CDC42EP3-203ENST00000453555 ILDR2Q71H61 639 aa13.83□□□□□ -0.2
CDC42EP3-203ENST00000453555 KDM2AQ9Y2K7 1162 aa13.83□□□□□ -0.2
CDC42EP3-203ENST00000453555 COL16A1Q07092 1604 aaPredicted RBP13.82□□□□□ -0.2
CDC42EP3-203ENST00000453555 BRINP3Q76B58 766 aa13.82□□□□□ -0.2
CDC42EP3-203ENST00000453555 DCAF11Q8TEB1 546 aa13.82□□□□□ -0.2
CDC42EP3-203ENST00000453555 PRAG1Q86YV5 1406 aa13.81□□□□□ -0.2
CDC42EP3-203ENST00000453555 WAPLQ7Z5K2 1190 aa13.81□□□□□ -0.2
CDC42EP3-203ENST00000453555 C14orf93Q9H972 538 aaKnown RBP13.81□□□□□ -0.2
CDC42EP3-203ENST00000453555 AHDC1Q5TGY3 1603 aaPredicted RBP13.81□□□□□ -0.2
CDC42EP3-203ENST00000453555 LRPPRCP42704 1394 aaKnown RBP13.81□□□□□ -0.2
CDC42EP3-203ENST00000453555 YTHDC2Q9H6S0 1430 aaKnown RBP13.81□□□□□ -0.2
CDC42EP3-203ENST00000453555 NHSL1Q5SYE7 1610 aa13.8□□□□□ -0.2
CDC42EP3-203ENST00000453555 ZNF692Q9BU19 519 aaPredicted RBP13.79□□□□□ -0.2
CDC42EP3-203ENST00000453555 ABCC11Q96J66 1382 aa13.79□□□□□ -0.2
CDC42EP3-203ENST00000453555 DHX57Q6P158 1386 aaKnown RBP13.78□□□□□ -0.2
CDC42EP3-203ENST00000453555 PLEKHH1Q9ULM0 1364 aa13.78□□□□□ -0.2
CDC42EP3-203ENST00000453555 TECPR2O15040 1411 aa13.78□□□□□ -0.2
CDC42EP3-203ENST00000453555 C1orf167Q5SNV9 1468 aa13.77□□□□□ -0.21
CDC42EP3-203ENST00000453555 DDX17Q92841 729 aaKnown RBP13.77□□□□□ -0.21
CDC42EP3-203ENST00000453555 JCADQ9P266 1359 aa13.77□□□□□ -0.21
CDC42EP3-203ENST00000453555 SSUH2Q9Y2M2 353 aa13.77□□□□□ -0.21
CDC42EP3-203ENST00000453555 RGPD8O14715 1765 aaPredicted RBP13.76□□□□□ -0.21
CDC42EP3-203ENST00000453555 SHPRHQ149N8 1683 aa13.76□□□□□ -0.21
CDC42EP3-203ENST00000453555 CDC42BPGQ6DT37 1551 aa13.76□□□□□ -0.21
CDC42EP3-203ENST00000453555 ORAI2Q96SN7 254 aa13.76□□□□□ -0.21
CDC42EP3-203ENST00000453555 NUTM2FA1L443 756 aa13.75□□□□□ -0.21
CDC42EP3-203ENST00000453555 SAFB2Q14151 953 aaKnown RBP eCLIP13.75□□□□□ -0.21
CDC42EP3-203ENST00000453555 FMN2Q9NZ56 1722 aa13.75□□□□□ -0.21
CDC42EP3-203ENST00000453555 ADGRB1O14514 1584 aa13.75□□□□□ -0.21
CDC42EP3-203ENST00000453555 PIP4P2Q8N4L2 257 aa13.73□□□□□ -0.21
CDC42EP3-203ENST00000453555 STAC3Q96MF2 364 aa13.73□□□□□ -0.21
CDC42EP3-203ENST00000453555 PRAM1Q96QH2 718 aa13.73□□□□□ -0.21
CDC42EP3-203ENST00000453555 TRAK1Q9UPV9 953 aa13.73□□□□□ -0.21
CDC42EP3-203ENST00000453555 TRIM26Q12899 539 aaPredicted RBP13.72□□□□□ -0.21
CDC42EP3-203ENST00000453555 ESCO1Q5FWF5 840 aa13.72□□□□□ -0.21
CDC42EP3-203ENST00000453555 SIRT1Q96EB6 747 aa13.72□□□□□ -0.21
CDC42EP3-203ENST00000453555 SIN3AQ96ST3 1273 aa13.72□□□□□ -0.21
CDC42EP3-203ENST00000453555 POGKQ9P215 609 aa13.72□□□□□ -0.21
CDC42EP3-203ENST00000453555 DLC1Q96QB1 1528 aa13.71□□□□□ -0.21
CDC42EP3-203ENST00000453555 ARHGEF28Q8N1W1 1705 aaKnown RBP13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 KIAA1210Q9ULL0 1709 aa13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 NUTM2BA6NNL0 878 aaPredicted RBP13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 NUTM2EB1AL46 878 aaPredicted RBP13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 NEUROD1Q13562 356 aa13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 NUTM2AQ8IVF1 878 aaPredicted RBP13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 LRRC59Q96AG4 307 aaKnown RBP13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 RGS17Q9UGC6 210 aaPredicted RBP13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 LRP6O75581 1613 aa13.7□□□□□ -0.22
CDC42EP3-203ENST00000453555 SPATA31A6Q5VVP1 1343 aa13.69□□□□□ -0.22
CDC42EP3-203ENST00000453555 MEX3CQ5U5Q3 659 aaKnown RBP13.68□□□□□ -0.22
CDC42EP3-203ENST00000453555 KIF1AQ12756 1690 aa13.67□□□□□ -0.22
CDC42EP3-203ENST00000453555 FXR2P51116 673 aaKnown RBP eCLIP13.67□□□□□ -0.22
CDC42EP3-203ENST00000453555 HIRIP3Q9BW71 556 aaPredicted RBP13.67□□□□□ -0.22
CDC42EP3-203ENST00000453555 MINK1Q8N4C8 1332 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 USP32Q8NFA0 1604 aa13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 SOCS7O14512 581 aa13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 FOXO3O43524 673 aa13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 XPCQ01831 940 aaPredicted RBP13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 L3MBTL2Q969R5 705 aa13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 PNPLA6Q8IY17 1366 aa13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 ADGRB2O60241 1585 aa13.66□□□□□ -0.22
CDC42EP3-203ENST00000453555 SOS2Q07890 1332 aaPredicted RBP13.65□□□□□ -0.22
CDC42EP3-203ENST00000453555 NBPF1Q3BBV0 1214 aa13.65□□□□□ -0.22
CDC42EP3-203ENST00000453555 NPHP3Q7Z494 1330 aa13.64□□□□□ -0.23
CDC42EP3-203ENST00000453555 PXDNQ92626 1479 aa13.64□□□□□ -0.23
CDC42EP3-203ENST00000453555 POTEAQ6S8J7 498 aa13.64□□□□□ -0.23
CDC42EP3-203ENST00000453555 SPDYE1Q8NFV5 336 aaPredicted RBP13.64□□□□□ -0.23
CDC42EP3-203ENST00000453555 CLEC11AQ9Y240 323 aa13.64□□□□□ -0.23
CDC42EP3-203ENST00000453555 TRPM1Q7Z4N2 1603 aa13.63□□□□□ -0.23
CDC42EP3-203ENST00000453555 COL22A1Q8NFW1 1626 aaPredicted RBP13.62□□□□□ -0.23
CDC42EP3-203ENST00000453555 PHF8Q9UPP1 1060 aa13.62□□□□□ -0.23
CDC42EP3-203ENST00000453555 PMFBP1Q8TBY8 1022 aa13.61□□□□□ -0.23
CDC42EP3-203ENST00000453555 WASLO00401 505 aaPredicted RBP13.6□□□□□ -0.23
CDC42EP3-203ENST00000453555 ADAMTS2O95450 1211 aa13.6□□□□□ -0.23
CDC42EP3-203ENST00000453555 KRT28Q7Z3Y7 464 aa13.6□□□□□ -0.23
CDC42EP3-203ENST00000453555 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
CDC42EP3-203ENST00000453555 QRICH2Q9H0J4 1663 aa13.59□□□□□ -0.23
CDC42EP3-203ENST00000453555 TULP4Q9NRJ4 1543 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms