RNA–Protein interactions for RNA: ENST00000453553.1

USP25-206, Transcript of ubiquitin specific peptidase 25, humanhuman

TSL 3

Gene USP25, Length 611 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP25-206ENST00000453553 PCDHB15Q9Y5E8 787 aa9.88□□□□□ -0.83
USP25-206ENST00000453553 GUCA2AQ02747 115 aa9.87□□□□□ -0.83
USP25-206ENST00000453553 PPP1R18Q6NYC8 613 aa9.87□□□□□ -0.83
USP25-206ENST00000453553 MTRQ99707 1265 aa9.87□□□□□ -0.83
USP25-206ENST00000453553 PCDHGC3Q9UN70 934 aa9.87□□□□□ -0.83
USP25-206ENST00000453553 PCDHB3Q9Y5E6 796 aa9.87□□□□□ -0.83
USP25-206ENST00000453553 NRG2O14511 850 aaPredicted RBP9.86□□□□□ -0.83
USP25-206ENST00000453553 CSPP1Q1MSJ5 1256 aa9.85□□□□□ -0.83
USP25-206ENST00000453553 ZNF516Q92618 1163 aa9.85□□□□□ -0.83
USP25-206ENST00000453553 SLC27A5Q9Y2P5 690 aa9.85□□□□□ -0.83
USP25-206ENST00000453553 LILRB3O75022 631 aa9.84□□□□□ -0.83
USP25-206ENST00000453553 PRPF38BQ5VTL8 546 aaKnown RBP9.84□□□□□ -0.83
USP25-206ENST00000453553 IL21Q9HBE4 155 aa9.84□□□□□ -0.83
USP25-206ENST00000453553 PPP2R2DQ66LE6 453 aa9.83□□□□□ -0.84
USP25-206ENST00000453553 SCUBE3Q8IX30 993 aa9.83□□□□□ -0.84
USP25-206ENST00000453553 NR1I2O75469 434 aa9.82□□□□□ -0.84
USP25-206ENST00000453553 HRCP23327 699 aa9.82□□□□□ -0.84
USP25-206ENST00000453553 QPCTQ16769 361 aa9.82□□□□□ -0.84
USP25-206ENST00000453553 FBXO31Q5XUX0 539 aaPredicted RBP9.82□□□□□ -0.84
USP25-206ENST00000453553 BLOC1S3Q6QNY0 202 aa9.82□□□□□ -0.84
USP25-206ENST00000453553 ZBTB3Q9H5J0 574 aa9.82□□□□□ -0.84
USP25-206ENST00000453553 V9GY48 417 aaPredicted RBP9.82□□□□□ -0.84
USP25-206ENST00000453553 NUTM2BA6NNL0 878 aaPredicted RBP9.81□□□□□ -0.84
USP25-206ENST00000453553 NUTM2EB1AL46 878 aaPredicted RBP9.81□□□□□ -0.84
USP25-206ENST00000453553 Q3C1V9 767 aa9.81□□□□□ -0.84
USP25-206ENST00000453553 NUTM2DQ5VT03 806 aaPredicted RBP9.81□□□□□ -0.84
USP25-206ENST00000453553 NUTM2AQ8IVF1 878 aaPredicted RBP9.81□□□□□ -0.84
USP25-206ENST00000453553 CABLES1Q8TDN4 633 aa9.81□□□□□ -0.84
USP25-206ENST00000453553 MTMR2Q13614 643 aa9.8□□□□□ -0.84
USP25-206ENST00000453553 RTL5Q5HYW3 569 aaPredicted RBP9.8□□□□□ -0.84
USP25-206ENST00000453553 NKX2-3Q8TAU0 364 aa9.8□□□□□ -0.84
USP25-206ENST00000453553 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.8□□□□□ -0.84
USP25-206ENST00000453553 SALL2Q9Y467 1007 aaPredicted RBP9.8□□□□□ -0.84
USP25-206ENST00000453553 SPDYE5A6NIY4 337 aa9.79□□□□□ -0.84
USP25-206ENST00000453553 C6orf229H3BNL8 230 aa9.79□□□□□ -0.84
USP25-206ENST00000453553 RFC5P40937 340 aa9.79□□□□□ -0.84
USP25-206ENST00000453553 COPS2P61201 443 aa9.79□□□□□ -0.84
USP25-206ENST00000453553 BRICD5Q6PL45 260 aa9.79□□□□□ -0.84
USP25-206ENST00000453553 SYMPKQ92797 1274 aaKnown RBP9.79□□□□□ -0.84
USP25-206ENST00000453553 FMNL1O95466 1100 aaPredicted RBP9.77□□□□□ -0.85
USP25-206ENST00000453553 RNF19BQ6ZMZ0 732 aa9.77□□□□□ -0.85
USP25-206ENST00000453553 THAP11Q96EK4 314 aa9.77□□□□□ -0.85
USP25-206ENST00000453553 TMEM259Q4ZIN3 620 aa9.76□□□□□ -0.85
USP25-206ENST00000453553 ZNF787Q6DD87 383 aa9.76□□□□□ -0.85
USP25-206ENST00000453553 PDZRN3Q9UPQ7 1066 aa9.76□□□□□ -0.85
USP25-206ENST00000453553 ZPR1O75312 459 aa9.75□□□□□ -0.85
USP25-206ENST00000453553 RETREG3Q86VR2 466 aa9.75□□□□□ -0.85
USP25-206ENST00000453553 USB1Q9BQ65 265 aaKnown RBP9.74□□□□□ -0.85
USP25-206ENST00000453553 BANK1Q8NDB2 785 aa9.73□□□□□ -0.85
USP25-206ENST00000453553 PRR7Q8TB68 274 aa9.73□□□□□ -0.85
USP25-206ENST00000453553 SPSB2Q99619 263 aa9.73□□□□□ -0.85
USP25-206ENST00000453553 CFAP99D6REC4 459 aa9.72□□□□□ -0.85
USP25-206ENST00000453553 AP1G2O75843 785 aa9.71□□□□□ -0.86
USP25-206ENST00000453553 FLIIQ13045 1269 aa9.71□□□□□ -0.86
USP25-206ENST00000453553 ZNF775Q96BV0 537 aaPredicted RBP9.71□□□□□ -0.86
USP25-206ENST00000453553 FAM160A2Q8N612 972 aaPredicted RBP9.7□□□□□ -0.86
USP25-206ENST00000453553 ADH1BP00325 375 aa9.69□□□□□ -0.86
USP25-206ENST00000453553 CTDSPL2Q05D32 466 aa9.69□□□□□ -0.86
USP25-206ENST00000453553 MSS51Q4VC12 460 aa9.69□□□□□ -0.86
USP25-206ENST00000453553 DESI1Q6ICB0 168 aa9.69□□□□□ -0.86
USP25-206ENST00000453553 HELBQ8NG08 1087 aaPredicted RBP9.69□□□□□ -0.86
USP25-206ENST00000453553 TSC1Q92574 1164 aa9.69□□□□□ -0.86
USP25-206ENST00000453553 TLL1O43897 1013 aa9.68□□□□□ -0.86
USP25-206ENST00000453553 TRIM67Q6ZTA4 783 aa9.68□□□□□ -0.86
USP25-206ENST00000453553 EMID1Q96A84 441 aaPredicted RBP9.67□□□□□ -0.86
USP25-206ENST00000453553 SNRKQ9NRH2 765 aa9.67□□□□□ -0.86
USP25-206ENST00000453553 JUNDP17535 347 aa9.66□□□□□ -0.86
USP25-206ENST00000453553 ERICH6Q7L0X2 663 aa9.66□□□□□ -0.86
USP25-206ENST00000453553 USP17L8P0C7I0 530 aa9.65□□□□□ -0.86
USP25-206ENST00000453553 GGCXP38435 758 aa9.65□□□□□ -0.86
USP25-206ENST00000453553 MMP16P51512 607 aa9.64□□□□□ -0.87
USP25-206ENST00000453553 MCM6Q14566 821 aa9.64□□□□□ -0.87
USP25-206ENST00000453553 LYPD8Q6UX82 237 aa9.64□□□□□ -0.87
USP25-206ENST00000453553 SLC6A16Q9GZN6 736 aa9.64□□□□□ -0.87
USP25-206ENST00000453553 PER1O15534 1290 aaPredicted RBP9.63□□□□□ -0.87
USP25-206ENST00000453553 DXOO77932 396 aaKnown RBP9.63□□□□□ -0.87
USP25-206ENST00000453553 C14orf37Q86TY3 774 aa9.62□□□□□ -0.87
USP25-206ENST00000453553 LRRN4Q8WUT4 740 aa9.62□□□□□ -0.87
USP25-206ENST00000453553 PRDM9Q9NQV7 894 aa9.62□□□□□ -0.87
USP25-206ENST00000453553 RNF223E7ERA6 249 aa9.61□□□□□ -0.87
USP25-206ENST00000453553 SOCS7O14512 581 aa9.61□□□□□ -0.87
USP25-206ENST00000453553 MTMR14Q8NCE2 650 aa9.61□□□□□ -0.87
USP25-206ENST00000453553 POTECB2RU33 542 aa9.6□□□□□ -0.87
USP25-206ENST00000453553 S1PR4O95977 384 aa9.6□□□□□ -0.87
USP25-206ENST00000453553 SLC19A1P41440 591 aa9.6□□□□□ -0.87
USP25-206ENST00000453553 MYT1Q01538 1121 aa9.6□□□□□ -0.87
USP25-206ENST00000453553 PTPRNQ16849 979 aa9.6□□□□□ -0.87
USP25-206ENST00000453553 TIMELESSQ9UNS1 1208 aa9.6□□□□□ -0.87
USP25-206ENST00000453553 HMX1Q9NP08 348 aaPredicted RBP9.59□□□□□ -0.87
USP25-206ENST00000453553 UBTFP17480 764 aaKnown RBP9.58□□□□□ -0.88
USP25-206ENST00000453553 GJD4Q96KN9 370 aaPredicted RBP9.58□□□□□ -0.88
USP25-206ENST00000453553 NUDT12Q9BQG2 462 aa9.58□□□□□ -0.88
USP25-206ENST00000453553 APBB1O00213 710 aa9.57□□□□□ -0.88
USP25-206ENST00000453553 SPRYD7Q5W111 196 aa9.57□□□□□ -0.88
USP25-206ENST00000453553 EVA1BQ9NVM1 165 aa9.57□□□□□ -0.88
USP25-206ENST00000453553 F12P00748 615 aaPredicted RBP9.56□□□□□ -0.88
USP25-206ENST00000453553 CCNYL3P0C7X3 344 aa9.56□□□□□ -0.88
USP25-206ENST00000453553 TRIM34Q9BYJ4 488 aa9.56□□□□□ -0.88
USP25-206ENST00000453553 ZMYND15Q9H091 742 aa9.56□□□□□ -0.88
USP25-206ENST00000453553 PRM3Q9NNZ6 103 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms