RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 SIRT1Q96EB6 747 aa21.77■■□□□ 1.07
SNX17-204ENST00000453453 XRN1Q8IZH2 1706 aaKnown RBP21.75■■□□□ 1.07
SNX17-204ENST00000453453 CHD2O14647 1828 aaKnown RBP21.75■■□□□ 1.07
SNX17-204ENST00000453453 HSPA2P54652 639 aa21.74■■□□□ 1.07
SNX17-204ENST00000453453 SAFB2Q14151 953 aaKnown RBP eCLIP21.73■■□□□ 1.07
SNX17-204ENST00000453453 ANP32EQ9BTT0 268 aa21.73■■□□□ 1.07
SNX17-204ENST00000453453 EVC2Q86UK5 1308 aa21.73■■□□□ 1.07
SNX17-204ENST00000453453 PTPRUQ92729 1446 aa21.73■■□□□ 1.07
SNX17-204ENST00000453453 AMOTL2Q9Y2J4 779 aa21.73■■□□□ 1.07
SNX17-204ENST00000453453 PTCH1Q13635 1447 aa21.72■■□□□ 1.07
SNX17-204ENST00000453453 WAPLQ7Z5K2 1190 aa21.69■■□□□ 1.06
SNX17-204ENST00000453453 MINK1Q8N4C8 1332 aaPredicted RBP21.69■■□□□ 1.06
SNX17-204ENST00000453453 ROBO2Q9HCK4 1378 aa21.69■■□□□ 1.06
SNX17-204ENST00000453453 TULP4Q9NRJ4 1543 aa21.69■■□□□ 1.06
SNX17-204ENST00000453453 PLEKHH1Q9ULM0 1364 aa21.68■■□□□ 1.06
SNX17-204ENST00000453453 STRCQ7RTU9 1775 aa21.68■■□□□ 1.06
SNX17-204ENST00000453453 PUS7Q96PZ0 661 aaKnown RBP21.66■■□□□ 1.06
SNX17-204ENST00000453453 NWD1Q149M9 1564 aa21.65■■□□□ 1.06
SNX17-204ENST00000453453 MYOM1P52179 1685 aa21.65■■□□□ 1.06
SNX17-204ENST00000453453 CCER2I3L3R5 266 aa21.65■■□□□ 1.06
SNX17-204ENST00000453453 ADGRB2O60241 1585 aa21.64■■□□□ 1.05
SNX17-204ENST00000453453 KCNA6P17658 529 aa21.62■■□□□ 1.05
SNX17-204ENST00000453453 SRPK2P78362 688 aaKnown RBP21.62■■□□□ 1.05
SNX17-204ENST00000453453 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.61■■□□□ 1.05
SNX17-204ENST00000453453 ATAD2Q6PL18 1390 aa21.6■■□□□ 1.05
SNX17-204ENST00000453453 NKTRP30414 1462 aaKnown RBP21.59■■□□□ 1.05
SNX17-204ENST00000453453 CDK19Q9BWU1 502 aa21.59■■□□□ 1.05
SNX17-204ENST00000453453 CABP2Q9NPB3 220 aa21.58■■□□□ 1.05
SNX17-204ENST00000453453 NINLQ9Y2I6 1382 aa21.58■■□□□ 1.05
SNX17-204ENST00000453453 WASLO00401 505 aaPredicted RBP21.58■■□□□ 1.04
SNX17-204ENST00000453453 ANP32CO43423 234 aa21.58■■□□□ 1.04
SNX17-204ENST00000453453 TMC1Q8TDI8 760 aa21.56■■□□□ 1.04
SNX17-204ENST00000453453 DMRT2Q9Y5R5 561 aa21.56■■□□□ 1.04
SNX17-204ENST00000453453 PANK3Q9H999 370 aa21.55■■□□□ 1.04
SNX17-204ENST00000453453 NALCNQ8IZF0 1738 aa21.53■■□□□ 1.04
SNX17-204ENST00000453453 NEFLP07196 543 aa21.52■■□□□ 1.04
SNX17-204ENST00000453453 PROSER2Q86WR7 435 aaPredicted RBP21.51■■□□□ 1.03
SNX17-204ENST00000453453 STRCP1A6NGW2 1772 aa21.51■■□□□ 1.03
SNX17-204ENST00000453453 CDC42BPGQ6DT37 1551 aa21.51■■□□□ 1.03
SNX17-204ENST00000453453 ADGRL3Q9HAR2 1447 aa21.5■■□□□ 1.03
SNX17-204ENST00000453453 C14orf37Q86TY3 774 aa21.5■■□□□ 1.03
SNX17-204ENST00000453453 ITSN1Q15811 1721 aa21.5■■□□□ 1.03
SNX17-204ENST00000453453 KNSTRNQ9Y448 316 aa21.49■■□□□ 1.03
SNX17-204ENST00000453453 FMN2Q9NZ56 1722 aa21.49■■□□□ 1.03
SNX17-204ENST00000453453 NUDT16Q96DE0 195 aaKnown RBP21.48■■□□□ 1.03
SNX17-204ENST00000453453 SLC12A5Q9H2X9 1139 aa21.48■■□□□ 1.03
SNX17-204ENST00000453453 ANKRD36BQ8N2N9 1353 aa21.48■■□□□ 1.03
SNX17-204ENST00000453453 TERF2IPQ9NYB0 399 aa21.47■■□□□ 1.03
SNX17-204ENST00000453453 ATP7BP35670 1465 aa21.47■■□□□ 1.03
SNX17-204ENST00000453453 TOPAZ1Q8N9V7 1692 aa21.47■■□□□ 1.03
SNX17-204ENST00000453453 PPIP5K1Q6PFW1 1433 aa21.46■■□□□ 1.03
SNX17-204ENST00000453453 NCOA3Q9Y6Q9 1424 aa21.45■■□□□ 1.02
SNX17-204ENST00000453453 PER1O15534 1290 aaPredicted RBP21.45■■□□□ 1.02
SNX17-204ENST00000453453 HDGFL2Q7Z4V5 671 aaPredicted RBP21.45■■□□□ 1.02
SNX17-204ENST00000453453 CCDC61Q9Y6R9 512 aa21.45■■□□□ 1.02
SNX17-204ENST00000453453 ANKARQ7Z5J8 1434 aa21.45■■□□□ 1.02
SNX17-204ENST00000453453 KTN1Q86UP2 1357 aaKnown RBP21.44■■□□□ 1.02
SNX17-204ENST00000453453 FKBP8Q14318 412 aa21.44■■□□□ 1.02
SNX17-204ENST00000453453 CABP1Q9NZU7 370 aa21.44■■□□□ 1.02
SNX17-204ENST00000453453 USP32Q8NFA0 1604 aa21.43■■□□□ 1.02
SNX17-204ENST00000453453 PRKRIP1Q9H875 184 aaPredicted RBP21.43■■□□□ 1.02
SNX17-204ENST00000453453 NSD3Q9BZ95 1437 aa21.42■■□□□ 1.02
SNX17-204ENST00000453453 RBM33Q96EV2 1170 aaKnown RBP21.41■■□□□ 1.02
SNX17-204ENST00000453453 PRR36Q9H6K5 1346 aa21.41■■□□□ 1.02
SNX17-204ENST00000453453 A0A1W2PP64 1363 aa21.41■■□□□ 1.02
SNX17-204ENST00000453453 TMEM94Q12767 1356 aa21.41■■□□□ 1.02
SNX17-204ENST00000453453 RGPD8O14715 1765 aaPredicted RBP21.41■■□□□ 1.02
SNX17-204ENST00000453453 AKAP12Q02952 1782 aa21.4■■□□□ 1.02
SNX17-204ENST00000453453 ZNF335Q9H4Z2 1342 aaPredicted RBP21.4■■□□□ 1.02
SNX17-204ENST00000453453 NUTM2FA1L443 756 aa21.4■■□□□ 1.02
SNX17-204ENST00000453453 NPC1L1Q9UHC9 1359 aa21.39■■□□□ 1.01
SNX17-204ENST00000453453 CNGB1Q14028 1251 aaPredicted RBP21.39■■□□□ 1.01
SNX17-204ENST00000453453 RALBP1Q15311 655 aa21.39■■□□□ 1.01
SNX17-204ENST00000453453 CARD14Q9BXL6 1004 aa21.39■■□□□ 1.01
SNX17-204ENST00000453453 C19orf44Q9H6X5 657 aa21.39■■□□□ 1.01
SNX17-204ENST00000453453 CD163L1Q9NR16 1453 aa21.38■■□□□ 1.01
SNX17-204ENST00000453453 MON2Q7Z3U7 1717 aa21.37■■□□□ 1.01
SNX17-204ENST00000453453 DCCP43146 1447 aa21.37■■□□□ 1.01
SNX17-204ENST00000453453 XIRP1Q702N8 1843 aaKnown RBP21.37■■□□□ 1.01
SNX17-204ENST00000453453 CGNL1Q0VF96 1302 aa21.37■■□□□ 1.01
SNX17-204ENST00000453453 CC2D1BQ5T0F9 858 aaKnown RBP21.37■■□□□ 1.01
SNX17-204ENST00000453453 LRRC7Q96NW7 1537 aa21.36■■□□□ 1.01
SNX17-204ENST00000453453 PLEKHG3A1L390 1219 aa21.36■■□□□ 1.01
SNX17-204ENST00000453453 AMER1Q5JTC6 1135 aaPredicted RBP21.36■■□□□ 1.01
SNX17-204ENST00000453453 MSH6P52701 1360 aa21.35■■□□□ 1.01
SNX17-204ENST00000453453 ZNF692Q9BU19 519 aaPredicted RBP21.35■■□□□ 1.01
SNX17-204ENST00000453453 CPSF1Q10570 1443 aaKnown RBP21.35■■□□□ 1.01
SNX17-204ENST00000453453 KIF20BQ96Q89 1820 aa21.35■■□□□ 1.01
SNX17-204ENST00000453453 ATF3P18847 181 aa21.34■■□□□ 1.01
SNX17-204ENST00000453453 NSD2O96028 1365 aa21.34■■□□□ 1.01
SNX17-204ENST00000453453 PARD3Q8TEW0 1356 aa21.34■■□□□ 1.01
SNX17-204ENST00000453453 ERICH6BQ5W0A0 696 aa21.33■■□□□ 1.01
SNX17-204ENST00000453453 EDC4Q6P2E9 1401 aaKnown RBP21.33■■□□□ 1
SNX17-204ENST00000453453 RBM19Q9Y4C8 960 aaKnown RBP21.32■■□□□ 1
SNX17-204ENST00000453453 ACEP12821 1306 aa21.31■■□□□ 1
SNX17-204ENST00000453453 NGDNQ8NEJ9 315 aaKnown RBP21.31■■□□□ 1
SNX17-204ENST00000453453 ANKRD26Q9UPS8 1709 aa21.31■■□□□ 1
SNX17-204ENST00000453453 MYBBP1AQ9BQG0 1328 aaKnown RBP21.31■■□□□ 1
SNX17-204ENST00000453453 CADPS2Q86UW7 1296 aa21.3■■□□□ 1
SNX17-204ENST00000453453 KIF1AQ12756 1690 aa21.29■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms