RNA–Protein interactions for RNA: ENST00000453337.1

HLA-DPA1-244, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS ALT2

Gene HLA-DPA1, Length 918 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-244ENST00000453337 DMRT2Q9Y5R5 561 aa17.35■□□□□ 0.37
HLA-DPA1-244ENST00000453337 DISP3Q9P2K9 1392 aa17.35■□□□□ 0.37
HLA-DPA1-244ENST00000453337 STRCQ7RTU9 1775 aa17.35■□□□□ 0.37
HLA-DPA1-244ENST00000453337 MINK1Q8N4C8 1332 aaPredicted RBP17.34■□□□□ 0.37
HLA-DPA1-244ENST00000453337 ROBO2Q9HCK4 1378 aa17.32■□□□□ 0.36
HLA-DPA1-244ENST00000453337 XRN1Q8IZH2 1706 aaKnown RBP17.32■□□□□ 0.36
HLA-DPA1-244ENST00000453337 PTCH1Q13635 1447 aa17.31■□□□□ 0.36
HLA-DPA1-244ENST00000453337 PLEKHH1Q9ULM0 1364 aa17.3■□□□□ 0.36
HLA-DPA1-244ENST00000453337 CDK19Q9BWU1 502 aa17.29■□□□□ 0.36
HLA-DPA1-244ENST00000453337 WASLO00401 505 aaPredicted RBP17.28■□□□□ 0.36
HLA-DPA1-244ENST00000453337 SRPK2P78362 688 aaKnown RBP17.28■□□□□ 0.36
HLA-DPA1-244ENST00000453337 PROSER2Q86WR7 435 aaPredicted RBP17.26■□□□□ 0.35
HLA-DPA1-244ENST00000453337 CABP2Q9NPB3 220 aa17.26■□□□□ 0.35
HLA-DPA1-244ENST00000453337 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.25■□□□□ 0.35
HLA-DPA1-244ENST00000453337 NWD1Q149M9 1564 aa17.25■□□□□ 0.35
HLA-DPA1-244ENST00000453337 TULP4Q9NRJ4 1543 aa17.25■□□□□ 0.35
HLA-DPA1-244ENST00000453337 ATAD2Q6PL18 1390 aa17.25■□□□□ 0.35
HLA-DPA1-244ENST00000453337 TMC1Q8TDI8 760 aa17.23■□□□□ 0.35
HLA-DPA1-244ENST00000453337 PANK3Q9H999 370 aa17.23■□□□□ 0.35
HLA-DPA1-244ENST00000453337 NINLQ9Y2I6 1382 aa17.22■□□□□ 0.35
HLA-DPA1-244ENST00000453337 NKTRP30414 1462 aaKnown RBP17.22■□□□□ 0.35
HLA-DPA1-244ENST00000453337 ADGRB2O60241 1585 aa17.22■□□□□ 0.35
HLA-DPA1-244ENST00000453337 ANP32CO43423 234 aa17.2■□□□□ 0.34
HLA-DPA1-244ENST00000453337 C14orf37Q86TY3 774 aa17.2■□□□□ 0.34
HLA-DPA1-244ENST00000453337 NUDT16Q96DE0 195 aaKnown RBP17.2■□□□□ 0.34
HLA-DPA1-244ENST00000453337 SLC12A5Q9H2X9 1139 aa17.2■□□□□ 0.34
HLA-DPA1-244ENST00000453337 NCOA3Q9Y6Q9 1424 aa17.2■□□□□ 0.34
HLA-DPA1-244ENST00000453337 CCDC61Q9Y6R9 512 aa17.19■□□□□ 0.34
HLA-DPA1-244ENST00000453337 STRCP1A6NGW2 1772 aa17.18■□□□□ 0.34
HLA-DPA1-244ENST00000453337 MYOM1P52179 1685 aa17.18■□□□□ 0.34
HLA-DPA1-244ENST00000453337 TERF2IPQ9NYB0 399 aa17.18■□□□□ 0.34
HLA-DPA1-244ENST00000453337 PER1O15534 1290 aaPredicted RBP17.17■□□□□ 0.34
HLA-DPA1-244ENST00000453337 KNSTRNQ9Y448 316 aa17.17■□□□□ 0.34
HLA-DPA1-244ENST00000453337 ADGRL3Q9HAR2 1447 aa17.16■□□□□ 0.34
HLA-DPA1-244ENST00000453337 C19orf44Q9H6X5 657 aa17.16■□□□□ 0.34
HLA-DPA1-244ENST00000453337 CABP1Q9NZU7 370 aa17.16■□□□□ 0.34
HLA-DPA1-244ENST00000453337 HDGFL2Q7Z4V5 671 aaPredicted RBP17.15■□□□□ 0.34
HLA-DPA1-244ENST00000453337 MIER1Q8N108 512 aa17.15■□□□□ 0.34
HLA-DPA1-244ENST00000453337 RBM33Q96EV2 1170 aaKnown RBP17.15■□□□□ 0.34
HLA-DPA1-244ENST00000453337 NALCNQ8IZF0 1738 aa17.14■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ZNF335Q9H4Z2 1342 aaPredicted RBP17.14■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ANKRD36BQ8N2N9 1353 aa17.14■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ZNF692Q9BU19 519 aaPredicted RBP17.13■□□□□ 0.33
HLA-DPA1-244ENST00000453337 TMEM94Q12767 1356 aa17.13■□□□□ 0.33
HLA-DPA1-244ENST00000453337 CDC42BPGQ6DT37 1551 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 PLEKHG3A1L390 1219 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 CARD14Q9BXL6 1004 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 PRR36Q9H6K5 1346 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 FMN2Q9NZ56 1722 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 PPIP5K1Q6PFW1 1433 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ANKARQ7Z5J8 1434 aa17.12■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ITSN1Q15811 1721 aa17.11■□□□□ 0.33
HLA-DPA1-244ENST00000453337 RGPD8O14715 1765 aaPredicted RBP17.11■□□□□ 0.33
HLA-DPA1-244ENST00000453337 NUTM2FA1L443 756 aa17.11■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ATF3P18847 181 aa17.11■□□□□ 0.33
HLA-DPA1-244ENST00000453337 ATP7BP35670 1465 aa17.1■□□□□ 0.33
HLA-DPA1-244ENST00000453337 RALBP1Q15311 655 aa17.09■□□□□ 0.33
HLA-DPA1-244ENST00000453337 CADPS2Q86UW7 1296 aa17.09■□□□□ 0.33
HLA-DPA1-244ENST00000453337 PRKRIP1Q9H875 184 aaPredicted RBP17.09■□□□□ 0.33
HLA-DPA1-244ENST00000453337 MSH6P52701 1360 aa17.09■□□□□ 0.33
HLA-DPA1-244ENST00000453337 KTN1Q86UP2 1357 aaKnown RBP17.09■□□□□ 0.33
HLA-DPA1-244ENST00000453337 LRRC7Q96NW7 1537 aa17.08■□□□□ 0.32
HLA-DPA1-244ENST00000453337 NPC1L1Q9UHC9 1359 aa17.08■□□□□ 0.32
HLA-DPA1-244ENST00000453337 XIRP1Q702N8 1843 aaKnown RBP17.07■□□□□ 0.32
HLA-DPA1-244ENST00000453337 USP32Q8NFA0 1604 aa17.07■□□□□ 0.32
HLA-DPA1-244ENST00000453337 DCCP43146 1447 aa17.07■□□□□ 0.32
HLA-DPA1-244ENST00000453337 AMER1Q5JTC6 1135 aaPredicted RBP17.07■□□□□ 0.32
HLA-DPA1-244ENST00000453337 TOPAZ1Q8N9V7 1692 aa17.07■□□□□ 0.32
HLA-DPA1-244ENST00000453337 A0A1W2PP64 1363 aa17.06■□□□□ 0.32
HLA-DPA1-244ENST00000453337 CGNL1Q0VF96 1302 aa17.06■□□□□ 0.32
HLA-DPA1-244ENST00000453337 CD163L1Q9NR16 1453 aa17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 CPSF1Q10570 1443 aaKnown RBP17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 NSD3Q9BZ95 1437 aa17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 AKAP12Q02952 1782 aa17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 ACEP12821 1306 aa17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 CC2D1BQ5T0F9 858 aaKnown RBP17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 NGDNQ8NEJ9 315 aaKnown RBP17.05■□□□□ 0.32
HLA-DPA1-244ENST00000453337 CCER2I3L3R5 266 aa17.04■□□□□ 0.32
HLA-DPA1-244ENST00000453337 CNGB1Q14028 1251 aaPredicted RBP17.04■□□□□ 0.32
HLA-DPA1-244ENST00000453337 ESCO1Q5FWF5 840 aa17.04■□□□□ 0.32
HLA-DPA1-244ENST00000453337 PMFBP1Q8TBY8 1022 aa17.04■□□□□ 0.32
HLA-DPA1-244ENST00000453337 PHF8Q9UPP1 1060 aa17.04■□□□□ 0.32
HLA-DPA1-244ENST00000453337 EDC4Q6P2E9 1401 aaKnown RBP17.02■□□□□ 0.31
HLA-DPA1-244ENST00000453337 POLR3AO14802 1390 aaPredicted RBP17.02■□□□□ 0.31
HLA-DPA1-244ENST00000453337 MON2Q7Z3U7 1717 aa17.01■□□□□ 0.31
HLA-DPA1-244ENST00000453337 NSD2O96028 1365 aa17.01■□□□□ 0.31
HLA-DPA1-244ENST00000453337 C1orf167Q5SNV9 1468 aa17■□□□□ 0.31
HLA-DPA1-244ENST00000453337 PARD3Q8TEW0 1356 aa17■□□□□ 0.31
HLA-DPA1-244ENST00000453337 FYB1O15117 783 aa16.99■□□□□ 0.31
HLA-DPA1-244ENST00000453337 MORC1Q86VD1 984 aa16.99■□□□□ 0.31
HLA-DPA1-244ENST00000453337 BRD4O60885 1362 aaPredicted RBP16.99■□□□□ 0.31
HLA-DPA1-244ENST00000453337 MYBBP1AQ9BQG0 1328 aaKnown RBP16.98■□□□□ 0.31
HLA-DPA1-244ENST00000453337 MST1RQ04912 1400 aa16.98■□□□□ 0.31
HLA-DPA1-244ENST00000453337 PSME1Q06323 249 aa16.98■□□□□ 0.31
HLA-DPA1-244ENST00000453337 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.98■□□□□ 0.31
HLA-DPA1-244ENST00000453337 ORAI2Q96SN7 254 aa16.98■□□□□ 0.31
HLA-DPA1-244ENST00000453337 LTBP4Q8N2S1 1624 aa16.98■□□□□ 0.31
HLA-DPA1-244ENST00000453337 USP6P35125 1406 aa16.97■□□□□ 0.31
HLA-DPA1-244ENST00000453337 SLAIN2Q9P270 581 aa16.97■□□□□ 0.31
HLA-DPA1-244ENST00000453337 TTC21BQ7Z4L5 1316 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms