RNA–Protein interactions for RNA: ENST00000451876.5

CPSF4-207, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5 BASIC

Gene CPSF4, Length 1,644 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-207ENST00000451876 MSH6P52701 1360 aa34.1■■■■□ 3.05
CPSF4-207ENST00000451876 EIF3AQ14152 1382 aaKnown RBP34.09■■■■□ 3.05
CPSF4-207ENST00000451876 ADGRB2O60241 1585 aa34.09■■■■□ 3.05
CPSF4-207ENST00000451876 CENPJQ9HC77 1338 aaPredicted RBP34.08■■■■□ 3.05
CPSF4-207ENST00000451876 USP47Q96K76 1375 aa34.08■■■■□ 3.05
CPSF4-207ENST00000451876 CDC42BPGQ6DT37 1551 aa34.08■■■■□ 3.05
CPSF4-207ENST00000451876 C19orf44Q9H6X5 657 aa34.07■■■■□ 3.04
CPSF4-207ENST00000451876 MINK1Q8N4C8 1332 aaPredicted RBP34.04■■■■□ 3.04
CPSF4-207ENST00000451876 DCCP43146 1447 aa34.04■■■■□ 3.04
CPSF4-207ENST00000451876 HIRIP3Q9BW71 556 aaPredicted RBP34.04■■■■□ 3.04
CPSF4-207ENST00000451876 FMN2Q9NZ56 1722 aa34.01■■■■□ 3.04
CPSF4-207ENST00000451876 ST20-MTHFSA0A0A6YYL1 179 aa33.97■■■■□ 3.03
CPSF4-207ENST00000451876 ZEB1P37275 1124 aaPredicted RBP33.97■■■■□ 3.03
CPSF4-207ENST00000451876 TULP4Q9NRJ4 1543 aa33.96■■■■□ 3.03
CPSF4-207ENST00000451876 ATF3P18847 181 aa33.96■■■■□ 3.03
CPSF4-207ENST00000451876 MST1RQ04912 1400 aa33.94■■■■□ 3.02
CPSF4-207ENST00000451876 CADPS2Q86UW7 1296 aa33.94■■■■□ 3.02
CPSF4-207ENST00000451876 SBNO2Q9Y2G9 1366 aa33.94■■■■□ 3.02
CPSF4-207ENST00000451876 RGPD8O14715 1765 aaPredicted RBP33.94■■■■□ 3.02
CPSF4-207ENST00000451876 USP32Q8NFA0 1604 aa33.92■■■■□ 3.02
CPSF4-207ENST00000451876 UBAP1LF5GYI3 381 aa33.92■■■■□ 3.02
CPSF4-207ENST00000451876 TESK2Q96S53 571 aa33.9■■■■□ 3.02
CPSF4-207ENST00000451876 EIF4G2P78344 907 aaKnown RBP eCLIP33.9■■■■□ 3.02
CPSF4-207ENST00000451876 WASLO00401 505 aaPredicted RBP33.89■■■■□ 3.02
CPSF4-207ENST00000451876 NUTM2FA1L443 756 aa33.88■■■■□ 3.01
CPSF4-207ENST00000451876 TOM1O60784 492 aa33.88■■■■□ 3.01
CPSF4-207ENST00000451876 HSPA5P11021 654 aaKnown RBP33.88■■■■□ 3.01
CPSF4-207ENST00000451876 C1orf167Q5SNV9 1468 aa33.86■■■■□ 3.01
CPSF4-207ENST00000451876 SLAIN2Q9P270 581 aa33.86■■■■□ 3.01
CPSF4-207ENST00000451876 ROBO1Q9Y6N7 1651 aa33.85■■■■□ 3.01
CPSF4-207ENST00000451876 CDK19Q9BWU1 502 aa33.84■■■■□ 3.01
CPSF4-207ENST00000451876 ATP7BP35670 1465 aa33.83■■■■□ 3.01
CPSF4-207ENST00000451876 PRR36Q9H6K5 1346 aa33.82■■■■□ 3
CPSF4-207ENST00000451876 EVC2Q86UK5 1308 aa33.81■■■■□ 3
CPSF4-207ENST00000451876 PIP4K2BP78356 416 aa33.81■■■■□ 3
CPSF4-207ENST00000451876 TOPAZ1Q8N9V7 1692 aa33.8■■■■□ 3
CPSF4-207ENST00000451876 ITSN1Q15811 1721 aa33.8■■■■□ 3
CPSF4-207ENST00000451876 ANKARQ7Z5J8 1434 aa33.8■■■■□ 3
CPSF4-207ENST00000451876 DISP3Q9P2K9 1392 aa33.79■■■■□ 3
CPSF4-207ENST00000451876 CABP2Q9NPB3 220 aa33.78■■■■□ 3
CPSF4-207ENST00000451876 SCAF1Q9H7N4 1312 aaKnown RBP33.77■■■■□ 3
CPSF4-207ENST00000451876 SRPK2P78362 688 aaKnown RBP33.77■■■■□ 3
CPSF4-207ENST00000451876 ORAI2Q96SN7 254 aa33.76■■■■□ 3
CPSF4-207ENST00000451876 BRINP3Q76B58 766 aa33.74■■■□□ 2.99
CPSF4-207ENST00000451876 NUDT16Q96DE0 195 aaKnown RBP33.73■■■□□ 2.99
CPSF4-207ENST00000451876 KIF1AQ12756 1690 aa33.72■■■□□ 2.99
CPSF4-207ENST00000451876 ESCO1Q5FWF5 840 aa33.71■■■□□ 2.99
CPSF4-207ENST00000451876 TMF1P82094 1093 aa33.71■■■□□ 2.99
CPSF4-207ENST00000451876 NHSL1Q5SYE7 1610 aa33.7■■■□□ 2.99
CPSF4-207ENST00000451876 FBXO41Q8TF61 875 aa33.69■■■□□ 2.98
CPSF4-207ENST00000451876 SLC24A1O60721 1099 aa33.68■■■□□ 2.98
CPSF4-207ENST00000451876 PPIP5K1Q6PFW1 1433 aa33.66■■■□□ 2.98
CPSF4-207ENST00000451876 CCDC61Q9Y6R9 512 aa33.64■■■□□ 2.98
CPSF4-207ENST00000451876 ATAD2Q6PL18 1390 aa33.64■■■□□ 2.98
CPSF4-207ENST00000451876 AHDC1Q5TGY3 1603 aaPredicted RBP33.63■■■□□ 2.97
CPSF4-207ENST00000451876 PMFBP1Q8TBY8 1022 aa33.63■■■□□ 2.97
CPSF4-207ENST00000451876 PHF8Q9UPP1 1060 aa33.63■■■□□ 2.97
CPSF4-207ENST00000451876 DDX17Q92841 729 aaKnown RBP33.62■■■□□ 2.97
CPSF4-207ENST00000451876 MYOM1P52179 1685 aa33.62■■■□□ 2.97
CPSF4-207ENST00000451876 PHLPP1O60346 1717 aa33.62■■■□□ 2.97
CPSF4-207ENST00000451876 C11orf95C9JLR9 678 aaPredicted RBP33.61■■■□□ 2.97
CPSF4-207ENST00000451876 PUS7Q96PZ0 661 aaKnown RBP33.59■■■□□ 2.97
CPSF4-207ENST00000451876 FOXO3O43524 673 aa33.58■■■□□ 2.97
CPSF4-207ENST00000451876 CABP1Q9NZU7 370 aa33.57■■■□□ 2.97
CPSF4-207ENST00000451876 COL16A1Q07092 1604 aaPredicted RBP33.56■■■□□ 2.96
CPSF4-207ENST00000451876 AKAP12Q02952 1782 aa33.56■■■□□ 2.96
CPSF4-207ENST00000451876 CDCA8Q53HL2 280 aa33.55■■■□□ 2.96
CPSF4-207ENST00000451876 PXDNQ92626 1479 aa33.55■■■□□ 2.96
CPSF4-207ENST00000451876 PLEKHG3A1L390 1219 aa33.54■■■□□ 2.96
CPSF4-207ENST00000451876 POLR3AO14802 1390 aaPredicted RBP33.54■■■□□ 2.96
CPSF4-207ENST00000451876 ACEP12821 1306 aa33.53■■■□□ 2.96
CPSF4-207ENST00000451876 NPHP3Q7Z494 1330 aa33.52■■■□□ 2.96
CPSF4-207ENST00000451876 XPCQ01831 940 aaPredicted RBP33.52■■■□□ 2.96
CPSF4-207ENST00000451876 CD163L1Q9NR16 1453 aa33.52■■■□□ 2.96
CPSF4-207ENST00000451876 NGDNQ8NEJ9 315 aaKnown RBP33.51■■■□□ 2.96
CPSF4-207ENST00000451876 TMC1Q8TDI8 760 aa33.51■■■□□ 2.96
CPSF4-207ENST00000451876 POLR3GLQ9BT43 218 aa33.51■■■□□ 2.96
CPSF4-207ENST00000451876 SLC12A5Q9H2X9 1139 aa33.51■■■□□ 2.96
CPSF4-207ENST00000451876 KIF7Q2M1P5 1343 aa33.51■■■□□ 2.95
CPSF4-207ENST00000451876 HSPA1LP34931 641 aa33.5■■■□□ 2.95
CPSF4-207ENST00000451876 TRPM3Q9HCF6 1732 aaPredicted RBP33.5■■■□□ 2.95
CPSF4-207ENST00000451876 MON2Q7Z3U7 1717 aa33.49■■■□□ 2.95
CPSF4-207ENST00000451876 SOS2Q07890 1332 aaPredicted RBP33.48■■■□□ 2.95
CPSF4-207ENST00000451876 NINLQ9Y2I6 1382 aa33.47■■■□□ 2.95
CPSF4-207ENST00000451876 CPSF1Q10570 1443 aaKnown RBP33.46■■■□□ 2.95
CPSF4-207ENST00000451876 WASHC2AQ641Q2 1341 aa33.45■■■□□ 2.95
CPSF4-207ENST00000451876 NRKQ7Z2Y5 1582 aa33.45■■■□□ 2.94
CPSF4-207ENST00000451876 PSME1Q06323 249 aa33.44■■■□□ 2.94
CPSF4-207ENST00000451876 CCDC7Q96M83 1385 aa33.44■■■□□ 2.94
CPSF4-207ENST00000451876 KRT28Q7Z3Y7 464 aa33.43■■■□□ 2.94
CPSF4-207ENST00000451876 A0A1W2PP64 1363 aa33.43■■■□□ 2.94
CPSF4-207ENST00000451876 USP6P35125 1406 aa33.42■■■□□ 2.94
CPSF4-207ENST00000451876 ILDR1Q86SU0 546 aaPredicted RBP33.41■■■□□ 2.94
CPSF4-207ENST00000451876 ALS2Q96Q42 1657 aa33.4■■■□□ 2.94
CPSF4-207ENST00000451876 ANKRD36BQ8N2N9 1353 aa33.38■■■□□ 2.93
CPSF4-207ENST00000451876 KTN1Q86UP2 1357 aaKnown RBP33.37■■■□□ 2.93
CPSF4-207ENST00000451876 SSH2Q76I76 1423 aa33.36■■■□□ 2.93
CPSF4-207ENST00000451876 TERF2IPQ9NYB0 399 aa33.35■■■□□ 2.93
CPSF4-207ENST00000451876 TNS3Q68CZ2 1445 aa33.35■■■□□ 2.93
CPSF4-207ENST00000451876 SBNO1A3KN83 1393 aa33.35■■■□□ 2.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms