RNA–Protein interactions for RNA: ENST00000451154.5

USP42-204, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 520 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-204ENST00000451154 C8orf37Q96NL8 207 aa40.17■■■■■ 4.02
USP42-204ENST00000451154 RXRBP28702 533 aa40.16■■■■■ 4.02
USP42-204ENST00000451154 ESCO1Q5FWF5 840 aa40.16■■■■■ 4.02
USP42-204ENST00000451154 RAB3GAP2Q9H2M9 1393 aa40.15■■■■■ 4.02
USP42-204ENST00000451154 PIK3C2GO75747 1445 aa40.15■■■■■ 4.02
USP42-204ENST00000451154 ABCC11Q96J66 1382 aa40.14■■■■■ 4.02
USP42-204ENST00000451154 LAMC1P11047 1609 aa40.14■■■■■ 4.02
USP42-204ENST00000451154 TECPR2O15040 1411 aa40.12■■■■■ 4.01
USP42-204ENST00000451154 NUTM2FA1L443 756 aa40.11■■■■■ 4.01
USP42-204ENST00000451154 ADAMTS2O95450 1211 aa40.11■■■■■ 4.01
USP42-204ENST00000451154 PLEKHH1Q9ULM0 1364 aa40.1■■■■■ 4.01
USP42-204ENST00000451154 C14orf93Q9H972 538 aaKnown RBP40.09■■■■■ 4.01
USP42-204ENST00000451154 CDC42BPGQ6DT37 1551 aa40.08■■■■■ 4.01
USP42-204ENST00000451154 YTHDC2Q9H6S0 1430 aaKnown RBP40.07■■■■■ 4
USP42-204ENST00000451154 CFAP70Q5T0N1 1121 aa40.06■■■■■ 4
USP42-204ENST00000451154 FOXO3O43524 673 aa40.05■■■■■ 4
USP42-204ENST00000451154 NGLY1Q96IV0 654 aa40.05■■■■■ 4
USP42-204ENST00000451154 QTRT2Q9H974 415 aaKnown RBP40.05■■■■■ 4
USP42-204ENST00000451154 NPHP3Q7Z494 1330 aa40.03■■■■■ 4
USP42-204ENST00000451154 XPCQ01831 940 aaPredicted RBP40.02■■■■■ 4
USP42-204ENST00000451154 KNDC1Q76NI1 1749 aa40.01■■■■■ 4
USP42-204ENST00000451154 SIRT1Q96EB6 747 aa39.99■■■■□ 3.99
USP42-204ENST00000451154 NRXN1Q9ULB1 1477 aa39.98■■■■□ 3.99
USP42-204ENST00000451154 DHX57Q6P158 1386 aaKnown RBP39.97■■■■□ 3.99
USP42-204ENST00000451154 UPF1Q92900 1129 aaKnown RBP eCLIP39.96■■■■□ 3.99
USP42-204ENST00000451154 MYOM2P54296 1465 aa39.94■■■■□ 3.98
USP42-204ENST00000451154 RBM6P78332 1123 aaKnown RBP39.94■■■■□ 3.98
USP42-204ENST00000451154 PXDNQ92626 1479 aa39.94■■■■□ 3.98
USP42-204ENST00000451154 CDK12Q9NYV4 1490 aaPredicted RBP39.92■■■■□ 3.98
USP42-204ENST00000451154 SAFB2Q14151 953 aaKnown RBP eCLIP39.9■■■■□ 3.98
USP42-204ENST00000451154 USP21Q9UK80 565 aa39.89■■■■□ 3.98
USP42-204ENST00000451154 FMN2Q9NZ56 1722 aa39.88■■■■□ 3.98
USP42-204ENST00000451154 COL22A1Q8NFW1 1626 aaPredicted RBP39.88■■■■□ 3.97
USP42-204ENST00000451154 PRAM1Q96QH2 718 aa39.88■■■■□ 3.97
USP42-204ENST00000451154 KDM2AQ9Y2K7 1162 aa39.88■■■■□ 3.97
USP42-204ENST00000451154 FNBP4Q8N3X1 1017 aaPredicted RBP39.85■■■■□ 3.97
USP42-204ENST00000451154 HRCP23327 699 aa39.83■■■■□ 3.97
USP42-204ENST00000451154 DCAF11Q8TEB1 546 aa39.83■■■■□ 3.97
USP42-204ENST00000451154 POGKQ9P215 609 aa39.82■■■■□ 3.97
USP42-204ENST00000451154 RGS12O14924 1447 aa39.82■■■■□ 3.96
USP42-204ENST00000451154 KRT28Q7Z3Y7 464 aa39.81■■■■□ 3.96
USP42-204ENST00000451154 RGPD8O14715 1765 aaPredicted RBP39.81■■■■□ 3.96
USP42-204ENST00000451154 TRPC5Q9UL62 973 aaPredicted RBP39.8■■■■□ 3.96
USP42-204ENST00000451154 PHF8Q9UPP1 1060 aa39.79■■■■□ 3.96
USP42-204ENST00000451154 TRAK1Q9UPV9 953 aa39.78■■■■□ 3.96
USP42-204ENST00000451154 SPATA31A3Q5VYP0 1347 aa39.77■■■■□ 3.96
USP42-204ENST00000451154 KIF1AQ12756 1690 aa39.74■■■■□ 3.95
USP42-204ENST00000451154 ADGRB1O14514 1584 aa39.72■■■■□ 3.95
USP42-204ENST00000451154 DLC1Q96QB1 1528 aa39.71■■■■□ 3.95
USP42-204ENST00000451154 PSME1Q06323 249 aa39.7■■■■□ 3.95
USP42-204ENST00000451154 ATRNO75882 1429 aa39.7■■■■□ 3.95
USP42-204ENST00000451154 HIRIP3Q9BW71 556 aaPredicted RBP39.69■■■■□ 3.94
USP42-204ENST00000451154 MARF1Q9Y4F3 1742 aaKnown RBP39.68■■■■□ 3.94
USP42-204ENST00000451154 BCL9LQ86UU0 1499 aa39.68■■■■□ 3.94
USP42-204ENST00000451154 STAC3Q96MF2 364 aa39.67■■■■□ 3.94
USP42-204ENST00000451154 PMFBP1Q8TBY8 1022 aa39.66■■■■□ 3.94
USP42-204ENST00000451154 MINK1Q8N4C8 1332 aaPredicted RBP39.65■■■■□ 3.94
USP42-204ENST00000451154 PLEKHG5O94827 1062 aa39.65■■■■□ 3.94
USP42-204ENST00000451154 LMOD2Q6P5Q4 547 aa39.62■■■■□ 3.93
USP42-204ENST00000451154 CABLES1Q8TDN4 633 aa39.62■■■■□ 3.93
USP42-204ENST00000451154 TNS3Q68CZ2 1445 aa39.59■■■■□ 3.93
USP42-204ENST00000451154 USP32Q8NFA0 1604 aa39.58■■■■□ 3.93
USP42-204ENST00000451154 ANKARQ7Z5J8 1434 aa39.58■■■■□ 3.93
USP42-204ENST00000451154 HAP1P54257 671 aaPredicted RBP39.58■■■■□ 3.93
USP42-204ENST00000451154 GJD4Q96KN9 370 aaPredicted RBP39.58■■■■□ 3.93
USP42-204ENST00000451154 SBNO1A3KN83 1393 aa39.58■■■■□ 3.93
USP42-204ENST00000451154 UNC5CLQ8IV45 518 aa39.56■■■■□ 3.92
USP42-204ENST00000451154 ADGRB2O60241 1585 aa39.55■■■■□ 3.92
USP42-204ENST00000451154 WASLO00401 505 aaPredicted RBP39.54■■■■□ 3.92
USP42-204ENST00000451154 PRR36Q9H6K5 1346 aa39.53■■■■□ 3.92
USP42-204ENST00000451154 ATAD2Q6PL18 1390 aa39.53■■■■□ 3.92
USP42-204ENST00000451154 SLIT2O94813 1529 aa39.51■■■■□ 3.92
USP42-204ENST00000451154 ARHGEF10O15013 1369 aa39.49■■■■□ 3.91
USP42-204ENST00000451154 EIF3AQ14152 1382 aaKnown RBP39.46■■■■□ 3.91
USP42-204ENST00000451154 TNKS1BP1Q9C0C2 1729 aaKnown RBP39.45■■■■□ 3.91
USP42-204ENST00000451154 TULP4Q9NRJ4 1543 aa39.44■■■■□ 3.9
USP42-204ENST00000451154 GPRASP1Q5JY77 1395 aa39.44■■■■□ 3.9
USP42-204ENST00000451154 EP400Q96L91 3159 aa39.43■■■■□ 3.9
USP42-204ENST00000451154 RALGAPBQ86X10 1494 aa39.43■■■■□ 3.9
USP42-204ENST00000451154 FAM83GA6ND36 823 aa39.41■■■■□ 3.9
USP42-204ENST00000451154 NGDNQ8NEJ9 315 aaKnown RBP39.41■■■■□ 3.9
USP42-204ENST00000451154 ARHGEF28Q8N1W1 1705 aaKnown RBP39.4■■■■□ 3.9
USP42-204ENST00000451154 GLI3P10071 1580 aa39.38■■■■□ 3.9
USP42-204ENST00000451154 TRPM3Q9HCF6 1732 aaPredicted RBP39.38■■■■□ 3.89
USP42-204ENST00000451154 NUDT16Q96DE0 195 aaKnown RBP39.37■■■■□ 3.89
USP42-204ENST00000451154 VPS72Q15906 364 aa39.36■■■■□ 3.89
USP42-204ENST00000451154 NBPF1Q3BBV0 1214 aa39.36■■■■□ 3.89
USP42-204ENST00000451154 ABCA3Q99758 1704 aa39.36■■■■□ 3.89
USP42-204ENST00000451154 PAK3O75914 559 aaPredicted RBP39.35■■■■□ 3.89
USP42-204ENST00000451154 CDK19Q9BWU1 502 aa39.35■■■■□ 3.89
USP42-204ENST00000451154 CCDC9Q9Y3X0 531 aaKnown RBP39.34■■■■□ 3.89
USP42-204ENST00000451154 PLCH1Q4KWH8 1693 aa39.32■■■■□ 3.88
USP42-204ENST00000451154 ALS2Q96Q42 1657 aa39.3■■■■□ 3.88
USP42-204ENST00000451154 NWD2Q9ULI1 1742 aa39.29■■■■□ 3.88
USP42-204ENST00000451154 SEPT12Q8IYM1 358 aa39.29■■■■□ 3.88
USP42-204ENST00000451154 ATP7BP35670 1465 aa39.27■■■■□ 3.88
USP42-204ENST00000451154 CCDC125Q86Z20 511 aa39.27■■■■□ 3.88
USP42-204ENST00000451154 KIAA1210Q9ULL0 1709 aa39.27■■■■□ 3.88
USP42-204ENST00000451154 BTG4Q9NY30 223 aa39.26■■■■□ 3.88
USP42-204ENST00000451154 BRWD3Q6RI45 1802 aa39.24■■■■□ 3.87
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms