RNA–Protein interactions for RNA: ENST00000450686.1

LINC01004-202, Transcript of long intergenic non-protein coding RNA 1004, humanhuman

TSL 3 BASIC

Gene LINC01004, Length 538 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01004-202ENST00000450686 PNPLA6Q8IY17 1366 aa15.36■□□□□ 0.05
LINC01004-202ENST00000450686 C1orf167Q5SNV9 1468 aa15.35■□□□□ 0.05
LINC01004-202ENST00000450686 C8orf37Q96NL8 207 aa15.35■□□□□ 0.05
LINC01004-202ENST00000450686 HFM1A2PYH4 1435 aa15.34■□□□□ 0.05
LINC01004-202ENST00000450686 ORAI2Q96SN7 254 aa15.34■□□□□ 0.05
LINC01004-202ENST00000450686 ADAMTS2O95450 1211 aa15.33■□□□□ 0.04
LINC01004-202ENST00000450686 RXRBP28702 533 aa15.33■□□□□ 0.04
LINC01004-202ENST00000450686 UPF1Q92900 1129 aaKnown RBP eCLIP15.33■□□□□ 0.04
LINC01004-202ENST00000450686 PTCH1Q13635 1447 aa15.33■□□□□ 0.04
LINC01004-202ENST00000450686 POTEHQ6S545 545 aa15.32■□□□□ 0.04
LINC01004-202ENST00000450686 LRRC59Q96AG4 307 aaKnown RBP15.31■□□□□ 0.04
LINC01004-202ENST00000450686 RGS12O14924 1447 aa15.3■□□□□ 0.04
LINC01004-202ENST00000450686 ADGRF5Q8IZF2 1346 aa15.29■□□□□ 0.04
LINC01004-202ENST00000450686 VGFO15240 615 aaPredicted RBP15.29■□□□□ 0.04
LINC01004-202ENST00000450686 RGL3Q3MIN7 710 aa15.29■□□□□ 0.04
LINC01004-202ENST00000450686 SPINK5Q9NQ38 1064 aaPredicted RBP15.29■□□□□ 0.04
LINC01004-202ENST00000450686 STK26Q9P289 416 aa15.29■□□□□ 0.04
LINC01004-202ENST00000450686 NUTM2FA1L443 756 aa15.28■□□□□ 0.04
LINC01004-202ENST00000450686 XPCQ01831 940 aaPredicted RBP15.28■□□□□ 0.04
LINC01004-202ENST00000450686 LAMC1P11047 1609 aa15.28■□□□□ 0.04
LINC01004-202ENST00000450686 IFT172Q9UG01 1749 aa15.27■□□□□ 0.04
LINC01004-202ENST00000450686 QTRT2Q9H974 415 aaKnown RBP15.27■□□□□ 0.04
LINC01004-202ENST00000450686 WAPLQ7Z5K2 1190 aa15.26■□□□□ 0.03
LINC01004-202ENST00000450686 NGLY1Q96IV0 654 aa15.26■□□□□ 0.03
LINC01004-202ENST00000450686 PLEKHH1Q9ULM0 1364 aa15.25■□□□□ 0.03
LINC01004-202ENST00000450686 SOS2Q07890 1332 aaPredicted RBP15.25■□□□□ 0.03
LINC01004-202ENST00000450686 RPGRIP1LQ68CZ1 1315 aa15.25■□□□□ 0.03
LINC01004-202ENST00000450686 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
LINC01004-202ENST00000450686 SRCAPQ6ZRS2 3230 aa15.24■□□□□ 0.03
LINC01004-202ENST00000450686 CDK12Q9NYV4 1490 aaPredicted RBP15.24■□□□□ 0.03
LINC01004-202ENST00000450686 PRAG1Q86YV5 1406 aa15.24■□□□□ 0.03
LINC01004-202ENST00000450686 CDC42BPGQ6DT37 1551 aa15.24■□□□□ 0.03
LINC01004-202ENST00000450686 ESCO1Q5FWF5 840 aa15.23■□□□□ 0.03
LINC01004-202ENST00000450686 CCDC144AA2RUR9 1427 aa15.23■□□□□ 0.03
LINC01004-202ENST00000450686 SPATA31E1Q6ZUB1 1445 aa15.23■□□□□ 0.03
LINC01004-202ENST00000450686 EP400Q96L91 3159 aa15.23■□□□□ 0.03
LINC01004-202ENST00000450686 PXDNQ92626 1479 aa15.22■□□□□ 0.03
LINC01004-202ENST00000450686 RBM6P78332 1123 aaKnown RBP15.22■□□□□ 0.03
LINC01004-202ENST00000450686 COL22A1Q8NFW1 1626 aaPredicted RBP15.21■□□□□ 0.03
LINC01004-202ENST00000450686 MPHOSPH9Q99550 1183 aa15.21■□□□□ 0.03
LINC01004-202ENST00000450686 FOXO3O43524 673 aa15.2■□□□□ 0.02
LINC01004-202ENST00000450686 USP21Q9UK80 565 aa15.2■□□□□ 0.02
LINC01004-202ENST00000450686 MYOM2P54296 1465 aa15.2■□□□□ 0.02
LINC01004-202ENST00000450686 RGPD8O14715 1765 aaPredicted RBP15.19■□□□□ 0.02
LINC01004-202ENST00000450686 PLEKHG5O94827 1062 aa15.19■□□□□ 0.02
LINC01004-202ENST00000450686 ATXN8OSP0DMR3 200 aa15.19■□□□□ 0.02
LINC01004-202ENST00000450686 KNDC1Q76NI1 1749 aa15.19■□□□□ 0.02
LINC01004-202ENST00000450686 FMN2Q9NZ56 1722 aa15.19■□□□□ 0.02
LINC01004-202ENST00000450686 MARF1Q9Y4F3 1742 aaKnown RBP15.18■□□□□ 0.02
LINC01004-202ENST00000450686 CAPN15O75808 1086 aa15.18■□□□□ 0.02
LINC01004-202ENST00000450686 LRPPRCP42704 1394 aaKnown RBP15.18■□□□□ 0.02
LINC01004-202ENST00000450686 PIK3C2GO75747 1445 aa15.17■□□□□ 0.02
LINC01004-202ENST00000450686 TECPR2O15040 1411 aa15.17■□□□□ 0.02
LINC01004-202ENST00000450686 ATRNO75882 1429 aa15.17■□□□□ 0.02
LINC01004-202ENST00000450686 NPHP3Q7Z494 1330 aa15.17■□□□□ 0.02
LINC01004-202ENST00000450686 YTHDC2Q9H6S0 1430 aaKnown RBP15.16■□□□□ 0.02
LINC01004-202ENST00000450686 SAFB2Q14151 953 aaKnown RBP eCLIP15.15■□□□□ 0.02
LINC01004-202ENST00000450686 ATF5Q9Y2D1 282 aaPredicted RBP15.15■□□□□ 0.02
LINC01004-202ENST00000450686 BCL9LQ86UU0 1499 aa15.14■□□□□ 0.01
LINC01004-202ENST00000450686 ANKRD30BQ9BXX2 1392 aa15.14■□□□□ 0.01
LINC01004-202ENST00000450686 FNBP4Q8N3X1 1017 aaPredicted RBP15.14■□□□□ 0.01
LINC01004-202ENST00000450686 TRPC5Q9UL62 973 aaPredicted RBP15.14■□□□□ 0.01
LINC01004-202ENST00000450686 ABCC11Q96J66 1382 aa15.13■□□□□ 0.01
LINC01004-202ENST00000450686 CFAP70Q5T0N1 1121 aa15.13■□□□□ 0.01
LINC01004-202ENST00000450686 CABLES1Q8TDN4 633 aa15.11■□□□□ 0.01
LINC01004-202ENST00000450686 ZNF219Q9P2Y4 722 aaPredicted RBP15.11■□□□□ 0.01
LINC01004-202ENST00000450686 KIF1AQ12756 1690 aa15.11■□□□□ 0.01
LINC01004-202ENST00000450686 ATAD2Q6PL18 1390 aa15.11■□□□□ 0.01
LINC01004-202ENST00000450686 GLI3P10071 1580 aa15.1■□□□□ 0.01
LINC01004-202ENST00000450686 KRT28Q7Z3Y7 464 aa15.09■□□□□ 0.01
LINC01004-202ENST00000450686 SPATA31A3Q5VYP0 1347 aa15.09■□□□□ 0.01
LINC01004-202ENST00000450686 USP32Q8NFA0 1604 aa15.09■□□□□ 0.01
LINC01004-202ENST00000450686 NRXN1Q9ULB1 1477 aa15.08■□□□□ 0.01
LINC01004-202ENST00000450686 BRWD3Q6RI45 1802 aa15.08■□□□□ 0.01
LINC01004-202ENST00000450686 PRAM1Q96QH2 718 aa15.08■□□□□ 0
LINC01004-202ENST00000450686 C14orf93Q9H972 538 aaKnown RBP15.08■□□□□ 0
LINC01004-202ENST00000450686 ABCA3Q99758 1704 aa15.08■□□□□ 0
LINC01004-202ENST00000450686 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.07■□□□□ 0
LINC01004-202ENST00000450686 RAB3GAP2Q9H2M9 1393 aa15.07■□□□□ 0
LINC01004-202ENST00000450686 RALGAPBQ86X10 1494 aa15.07■□□□□ 0
LINC01004-202ENST00000450686 PLCH1Q4KWH8 1693 aa15.06■□□□□ 0
LINC01004-202ENST00000450686 LMOD2Q6P5Q4 547 aa15.06■□□□□ 0
LINC01004-202ENST00000450686 PMFBP1Q8TBY8 1022 aa15.06■□□□□ 0
LINC01004-202ENST00000450686 GJD4Q96KN9 370 aaPredicted RBP15.06■□□□□ 0
LINC01004-202ENST00000450686 HIRIP3Q9BW71 556 aaPredicted RBP15.06■□□□□ 0
LINC01004-202ENST00000450686 PHF8Q9UPP1 1060 aa15.06■□□□□ 0
LINC01004-202ENST00000450686 TNS3Q68CZ2 1445 aa15.06■□□□□ 0
LINC01004-202ENST00000450686 SLIT2O94813 1529 aa15.06■□□□□ 0
LINC01004-202ENST00000450686 DHX57Q6P158 1386 aaKnown RBP15.04■□□□□ -0
LINC01004-202ENST00000450686 UNC5CLQ8IV45 518 aa15.04■□□□□ -0
LINC01004-202ENST00000450686 ADGRB1O14514 1584 aa15.03■□□□□ -0
LINC01004-202ENST00000450686 HAP1P54257 671 aaPredicted RBP15.03■□□□□ -0
LINC01004-202ENST00000450686 TRAK1Q9UPV9 953 aa15.03■□□□□ -0
LINC01004-202ENST00000450686 KDM2AQ9Y2K7 1162 aa15.03■□□□□ -0
LINC01004-202ENST00000450686 DSG3P32926 999 aa15.02■□□□□ -0
LINC01004-202ENST00000450686 POGKQ9P215 609 aa15.02■□□□□ -0
LINC01004-202ENST00000450686 TRPM3Q9HCF6 1732 aaPredicted RBP15.01□□□□□ -0.01
LINC01004-202ENST00000450686 MINK1Q8N4C8 1332 aaPredicted RBP15.01□□□□□ -0.01
LINC01004-202ENST00000450686 PRR36Q9H6K5 1346 aa15□□□□□ -0.01
LINC01004-202ENST00000450686 PSME1Q06323 249 aa15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 317 ms