RNA–Protein interactions for RNA: ENST00000450338.5

SEMA3F-207, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 1,693 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-207ENST00000450338 CHD2O14647 1828 aaKnown RBP30.72■■■□□ 2.51
SEMA3F-207ENST00000450338 XRN1Q8IZH2 1706 aaKnown RBP30.71■■■□□ 2.51
SEMA3F-207ENST00000450338 MINK1Q8N4C8 1332 aaPredicted RBP30.71■■■□□ 2.51
SEMA3F-207ENST00000450338 ROBO2Q9HCK4 1378 aa30.71■■■□□ 2.51
SEMA3F-207ENST00000450338 MIER1Q8N108 512 aa30.7■■■□□ 2.5
SEMA3F-207ENST00000450338 PTCH1Q13635 1447 aa30.68■■■□□ 2.5
SEMA3F-207ENST00000450338 MYOM1P52179 1685 aa30.67■■■□□ 2.5
SEMA3F-207ENST00000450338 PUS7Q96PZ0 661 aaKnown RBP30.67■■■□□ 2.5
SEMA3F-207ENST00000450338 ANP32CO43423 234 aa30.62■■■□□ 2.49
SEMA3F-207ENST00000450338 KCNA6P17658 529 aa30.61■■■□□ 2.49
SEMA3F-207ENST00000450338 STRCQ7RTU9 1775 aa30.6■■■□□ 2.49
SEMA3F-207ENST00000450338 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.6■■■□□ 2.49
SEMA3F-207ENST00000450338 SRPK2P78362 688 aaKnown RBP30.59■■■□□ 2.49
SEMA3F-207ENST00000450338 CABP2Q9NPB3 220 aa30.59■■■□□ 2.49
SEMA3F-207ENST00000450338 CDK19Q9BWU1 502 aa30.58■■■□□ 2.49
SEMA3F-207ENST00000450338 PANK3Q9H999 370 aa30.58■■■□□ 2.49
SEMA3F-207ENST00000450338 ADGRB2O60241 1585 aa30.56■■■□□ 2.48
SEMA3F-207ENST00000450338 WASLO00401 505 aaPredicted RBP30.55■■■□□ 2.48
SEMA3F-207ENST00000450338 NWD1Q149M9 1564 aa30.55■■■□□ 2.48
SEMA3F-207ENST00000450338 ATAD2Q6PL18 1390 aa30.54■■■□□ 2.48
SEMA3F-207ENST00000450338 TMC1Q8TDI8 760 aa30.52■■■□□ 2.48
SEMA3F-207ENST00000450338 PER1O15534 1290 aaPredicted RBP30.52■■■□□ 2.48
SEMA3F-207ENST00000450338 NINLQ9Y2I6 1382 aa30.5■■■□□ 2.47
SEMA3F-207ENST00000450338 SLC12A5Q9H2X9 1139 aa30.49■■■□□ 2.47
SEMA3F-207ENST00000450338 PRKRIP1Q9H875 184 aaPredicted RBP30.46■■■□□ 2.47
SEMA3F-207ENST00000450338 NKTRP30414 1462 aaKnown RBP30.44■■■□□ 2.46
SEMA3F-207ENST00000450338 KNSTRNQ9Y448 316 aa30.43■■■□□ 2.46
SEMA3F-207ENST00000450338 NALCNQ8IZF0 1738 aa30.42■■■□□ 2.46
SEMA3F-207ENST00000450338 NUDT16Q96DE0 195 aaKnown RBP30.41■■■□□ 2.46
SEMA3F-207ENST00000450338 ANKRD36BQ8N2N9 1353 aa30.41■■■□□ 2.46
SEMA3F-207ENST00000450338 STRCP1A6NGW2 1772 aa30.41■■■□□ 2.46
SEMA3F-207ENST00000450338 CARD14Q9BXL6 1004 aa30.39■■■□□ 2.46
SEMA3F-207ENST00000450338 ATP7BP35670 1465 aa30.39■■■□□ 2.45
SEMA3F-207ENST00000450338 CNGB1Q14028 1251 aaPredicted RBP30.38■■■□□ 2.45
SEMA3F-207ENST00000450338 PROSER2Q86WR7 435 aaPredicted RBP30.38■■■□□ 2.45
SEMA3F-207ENST00000450338 CABP1Q9NZU7 370 aa30.38■■■□□ 2.45
SEMA3F-207ENST00000450338 CCDC61Q9Y6R9 512 aa30.37■■■□□ 2.45
SEMA3F-207ENST00000450338 KTN1Q86UP2 1357 aaKnown RBP30.37■■■□□ 2.45
SEMA3F-207ENST00000450338 CCER2I3L3R5 266 aa30.36■■■□□ 2.45
SEMA3F-207ENST00000450338 ADGRL3Q9HAR2 1447 aa30.36■■■□□ 2.45
SEMA3F-207ENST00000450338 TERF2IPQ9NYB0 399 aa30.36■■■□□ 2.45
SEMA3F-207ENST00000450338 PPIP5K1Q6PFW1 1433 aa30.36■■■□□ 2.45
SEMA3F-207ENST00000450338 CDC42BPGQ6DT37 1551 aa30.35■■■□□ 2.45
SEMA3F-207ENST00000450338 PRR36Q9H6K5 1346 aa30.35■■■□□ 2.45
SEMA3F-207ENST00000450338 RBM33Q96EV2 1170 aaKnown RBP30.35■■■□□ 2.45
SEMA3F-207ENST00000450338 DMRT2Q9Y5R5 561 aa30.35■■■□□ 2.45
SEMA3F-207ENST00000450338 FMN2Q9NZ56 1722 aa30.35■■■□□ 2.45
SEMA3F-207ENST00000450338 TOPAZ1Q8N9V7 1692 aa30.34■■■□□ 2.45
SEMA3F-207ENST00000450338 A0A1W2PP64 1363 aa30.34■■■□□ 2.45
SEMA3F-207ENST00000450338 NSD3Q9BZ95 1437 aa30.33■■■□□ 2.45
SEMA3F-207ENST00000450338 AMER1Q5JTC6 1135 aaPredicted RBP30.33■■■□□ 2.45
SEMA3F-207ENST00000450338 CD163L1Q9NR16 1453 aa30.33■■■□□ 2.45
SEMA3F-207ENST00000450338 NPC1L1Q9UHC9 1359 aa30.32■■■□□ 2.44
SEMA3F-207ENST00000450338 USP32Q8NFA0 1604 aa30.32■■■□□ 2.44
SEMA3F-207ENST00000450338 RALBP1Q15311 655 aa30.32■■■□□ 2.44
SEMA3F-207ENST00000450338 HDGFL2Q7Z4V5 671 aaPredicted RBP30.32■■■□□ 2.44
SEMA3F-207ENST00000450338 ITSN1Q15811 1721 aa30.31■■■□□ 2.44
SEMA3F-207ENST00000450338 CC2D1BQ5T0F9 858 aaKnown RBP30.31■■■□□ 2.44
SEMA3F-207ENST00000450338 NUTM2FA1L443 756 aa30.3■■■□□ 2.44
SEMA3F-207ENST00000450338 C14orf37Q86TY3 774 aa30.3■■■□□ 2.44
SEMA3F-207ENST00000450338 RGPD8O14715 1765 aaPredicted RBP30.3■■■□□ 2.44
SEMA3F-207ENST00000450338 PARD3Q8TEW0 1356 aa30.29■■■□□ 2.44
SEMA3F-207ENST00000450338 ANKARQ7Z5J8 1434 aa30.29■■■□□ 2.44
SEMA3F-207ENST00000450338 NCOA3Q9Y6Q9 1424 aa30.27■■■□□ 2.44
SEMA3F-207ENST00000450338 CPSF1Q10570 1443 aaKnown RBP30.25■■■□□ 2.43
SEMA3F-207ENST00000450338 AKAP12Q02952 1782 aa30.25■■■□□ 2.43
SEMA3F-207ENST00000450338 TMEM94Q12767 1356 aa30.25■■■□□ 2.43
SEMA3F-207ENST00000450338 CGNL1Q0VF96 1302 aa30.24■■■□□ 2.43
SEMA3F-207ENST00000450338 PLEKHG3A1L390 1219 aa30.24■■■□□ 2.43
SEMA3F-207ENST00000450338 ZNF335Q9H4Z2 1342 aaPredicted RBP30.24■■■□□ 2.43
SEMA3F-207ENST00000450338 MYBBP1AQ9BQG0 1328 aaKnown RBP30.22■■■□□ 2.43
SEMA3F-207ENST00000450338 MON2Q7Z3U7 1717 aa30.21■■■□□ 2.43
SEMA3F-207ENST00000450338 C19orf44Q9H6X5 657 aa30.21■■■□□ 2.43
SEMA3F-207ENST00000450338 ZNF692Q9BU19 519 aaPredicted RBP30.2■■■□□ 2.43
SEMA3F-207ENST00000450338 XIRP1Q702N8 1843 aaKnown RBP30.19■■■□□ 2.42
SEMA3F-207ENST00000450338 NSD2O96028 1365 aa30.18■■■□□ 2.42
SEMA3F-207ENST00000450338 ACEP12821 1306 aa30.18■■■□□ 2.42
SEMA3F-207ENST00000450338 EDC4Q6P2E9 1401 aaKnown RBP30.16■■■□□ 2.42
SEMA3F-207ENST00000450338 LRRC7Q96NW7 1537 aa30.16■■■□□ 2.42
SEMA3F-207ENST00000450338 KIF20BQ96Q89 1820 aa30.15■■■□□ 2.42
SEMA3F-207ENST00000450338 DCCP43146 1447 aa30.15■■■□□ 2.42
SEMA3F-207ENST00000450338 PMFBP1Q8TBY8 1022 aa30.14■■■□□ 2.42
SEMA3F-207ENST00000450338 CCDC184Q52MB2 194 aa30.14■■■□□ 2.41
SEMA3F-207ENST00000450338 MRS2Q9HD23 443 aa30.14■■■□□ 2.41
SEMA3F-207ENST00000450338 POLR3AO14802 1390 aaPredicted RBP30.13■■■□□ 2.41
SEMA3F-207ENST00000450338 ANKRD26Q9UPS8 1709 aa30.12■■■□□ 2.41
SEMA3F-207ENST00000450338 NLRP13Q86W25 1043 aa30.12■■■□□ 2.41
SEMA3F-207ENST00000450338 NGDNQ8NEJ9 315 aaKnown RBP30.12■■■□□ 2.41
SEMA3F-207ENST00000450338 ATF3P18847 181 aa30.11■■■□□ 2.41
SEMA3F-207ENST00000450338 MORC1Q86VD1 984 aa30.11■■■□□ 2.41
SEMA3F-207ENST00000450338 FYB1O15117 783 aa30.11■■■□□ 2.41
SEMA3F-207ENST00000450338 BRD4O60885 1362 aaPredicted RBP30.1■■■□□ 2.41
SEMA3F-207ENST00000450338 MSH6P52701 1360 aa30.1■■■□□ 2.41
SEMA3F-207ENST00000450338 SUGP2Q8IX01 1082 aaKnown RBP eCLIP30.1■■■□□ 2.41
SEMA3F-207ENST00000450338 USP6P35125 1406 aa30.1■■■□□ 2.41
SEMA3F-207ENST00000450338 PHF8Q9UPP1 1060 aa30.09■■■□□ 2.41
SEMA3F-207ENST00000450338 NRKQ7Z2Y5 1582 aa30.09■■■□□ 2.41
SEMA3F-207ENST00000450338 PPP2R1AP30153 589 aa30.08■■■□□ 2.41
SEMA3F-207ENST00000450338 ESCO1Q5FWF5 840 aa30.07■■■□□ 2.4
SEMA3F-207ENST00000450338 CADPS2Q86UW7 1296 aa30.07■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms