RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 ERLIN1O75477 346 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 KIAA0754O94854 1291 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 MICALCLQ6ZW33 695 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 KRT222Q8N1A0 295 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 CFAP53Q96M91 514 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 TRIM34Q9BYJ4 488 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 RASSF4Q9H2L5 321 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 CWC22Q9HCG8 908 aaKnown RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 FAM135AQ9P2D6 1515 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 PLCB2Q00722 1185 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 UVSSAQ2YD98 709 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 KLHL34Q8N239 644 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 TMX4Q9H1E5 349 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 YY1AP1Q9H869 796 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 ZNF608Q9ULD9 1512 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 CCDC88BA6NC98 1476 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 RRBP1Q9P2E9 1410 aaKnown RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 MTUS2Q5JR59 1369 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 PLEKHH1Q9ULM0 1364 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 SH3BGRP55822 239 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 CCDC112Q8NEF3 446 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 GBP3Q9H0R5 595 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 MYO6Q9UM54 1294 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 H0YHG0 523 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 IPO8O15397 1037 aaKnown RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 NEMFO60524 1076 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 MCM3P25205 808 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 GBP2P32456 591 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 MIPOL1Q8TD10 442 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 PAXBP1Q9Y5B6 917 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 MIA2Q96PC5 1412 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 GOLGA6L7A0A1B0GV03 622 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 FRAT2O75474 233 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 PPP1R15AO75807 674 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 MCM4P33991 863 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 KCNJ4P48050 445 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 TUBB4BP68371 445 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 TTC31Q49AM3 519 aaPredicted RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 CAGE1Q8TC20 777 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 NOC3LQ8WTT2 800 aaKnown RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 CCDC34Q96HJ3 373 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 CPSF2Q9P2I0 782 aaKnown RBP2.67□□□□□ -1.98
USP53-202ENST00000450251 HDAC5Q9UQL6 1122 aa2.67□□□□□ -1.98
USP53-202ENST00000450251 ABCA5Q8WWZ7 1642 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 TRDNQ13061 729 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 NOL10Q9BSC4 688 aaKnown RBP2.66□□□□□ -1.98
USP53-202ENST00000450251 ZHX1Q9UKY1 873 aaPredicted RBP2.66□□□□□ -1.98
USP53-202ENST00000450251 GOLGA6L9A6NEM1 432 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 ATXN8OSP0DMR3 200 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 MCM2P49736 904 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 BMS1Q14692 1282 aaKnown RBP2.66□□□□□ -1.98
USP53-202ENST00000450251 FILIP1Q7Z7B0 1213 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 FMNL3Q8IVF7 1028 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 ARAP3Q8WWN8 1544 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 TMCO5BA8MYB1 307 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 GOLGA6L19H0YKK7 550 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 U2SURPO15042 1029 aaKnown RBP2.66□□□□□ -1.98
USP53-202ENST00000450251 RNF25Q96BH1 459 aaPredicted RBP2.66□□□□□ -1.98
USP53-202ENST00000450251 NF2P35240 595 aa2.66□□□□□ -1.98
USP53-202ENST00000450251 KIF3CO14782 793 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 SYCP1Q15431 976 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 JAKMIP3Q5VZ66 844 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 NLRP13Q86W25 1043 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 AEBP1Q8IUX7 1158 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 STK31Q9BXU1 1019 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 GOLGA6L10A0A0M3HER8 536 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 CT47A1Q5JQC4 288 aaPredicted RBP2.65□□□□□ -1.98
USP53-202ENST00000450251 CCDC50Q8IVM0 306 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 RUFY1Q96T51 708 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 CCDC171Q6TFL3 1326 aa2.65□□□□□ -1.98
USP53-202ENST00000450251 RIMBP3CA6NJZ7 1639 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 RIMBP3BA6NNM3 1639 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 RIMBP3Q9UFD9 1639 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 SHTN1A0MZ66 631 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 CCDC38Q502W7 563 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 BANK1Q8NDB2 785 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 SWAP70Q9UH65 585 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 ROCK1Q13464 1354 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 CCDC7Q96M83 1385 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 POLA1P09884 1462 aaPredicted RBP2.65□□□□□ -1.99
USP53-202ENST00000450251 TPD52L1Q16890 204 aaPredicted RBP2.65□□□□□ -1.99
USP53-202ENST00000450251 TICAM2Q86XR7 235 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 IFNLR1Q8IU57 520 aaPredicted RBP2.65□□□□□ -1.99
USP53-202ENST00000450251 ERC1Q8IUD2 1116 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 NAT10Q9H0A0 1025 aaKnown RBP2.65□□□□□ -1.99
USP53-202ENST00000450251 PRKRIP1Q9H875 184 aaPredicted RBP2.65□□□□□ -1.99
USP53-202ENST00000450251 KIF27Q86VH2 1401 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 CBX1P83916 185 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 IQCEQ6IPM2 695 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 LUZP1Q86V48 1076 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 ANKRD20A12PQ8NF67 263 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 PPM1EQ8WY54 764 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 IFT57Q9NWB7 429 aa2.65□□□□□ -1.99
USP53-202ENST00000450251 GOLIM4O00461 696 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 GOLGA2Q08379 1002 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 LRCH2Q5VUJ6 765 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 TMCO3Q6UWJ1 677 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 RPAINQ86UA6 219 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 GPATCH11Q8N954 259 aa2.64□□□□□ -1.99
USP53-202ENST00000450251 ZNF397Q8NF99 534 aaPredicted RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms