RNA–Protein interactions for RNA: ENST00000449850.1

KDM1B-202, Transcript of lysine demethylase 1B, humanhuman

TSL 5

Gene KDM1B, Length 2,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1B-202ENST00000449850 FAM135BQ49AJ0 1406 aa16.51■□□□□ 0.23
KDM1B-202ENST00000449850 CCER2I3L3R5 266 aa16.5■□□□□ 0.23
KDM1B-202ENST00000449850 DIP2AQ14689 1571 aa16.5■□□□□ 0.23
KDM1B-202ENST00000449850 KNDC1Q76NI1 1749 aa16.5■□□□□ 0.23
KDM1B-202ENST00000449850 PUS7Q96PZ0 661 aaKnown RBP16.5■□□□□ 0.23
KDM1B-202ENST00000449850 CABP2Q9NPB3 220 aa16.5■□□□□ 0.23
KDM1B-202ENST00000449850 CNGB1Q14028 1251 aaPredicted RBP16.49■□□□□ 0.23
KDM1B-202ENST00000449850 AMOTL2Q9Y2J4 779 aa16.48■□□□□ 0.23
KDM1B-202ENST00000449850 SLC12A5Q9H2X9 1139 aa16.47■□□□□ 0.23
KDM1B-202ENST00000449850 SRPK2P78362 688 aaKnown RBP16.46■□□□□ 0.23
KDM1B-202ENST00000449850 NCKAP5LQ9HCH0 1330 aa16.46■□□□□ 0.22
KDM1B-202ENST00000449850 CCDC184Q52MB2 194 aa16.45■□□□□ 0.22
KDM1B-202ENST00000449850 CDK19Q9BWU1 502 aa16.45■□□□□ 0.22
KDM1B-202ENST00000449850 CARD14Q9BXL6 1004 aa16.45■□□□□ 0.22
KDM1B-202ENST00000449850 PIK3R4Q99570 1358 aa16.45■□□□□ 0.22
KDM1B-202ENST00000449850 NPHP4O75161 1426 aaPredicted RBP16.44■□□□□ 0.22
KDM1B-202ENST00000449850 TMC1Q8TDI8 760 aa16.44■□□□□ 0.22
KDM1B-202ENST00000449850 AMER1Q5JTC6 1135 aaPredicted RBP16.43■□□□□ 0.22
KDM1B-202ENST00000449850 PTCH1Q13635 1447 aa16.43■□□□□ 0.22
KDM1B-202ENST00000449850 KCNA6P17658 529 aa16.43■□□□□ 0.22
KDM1B-202ENST00000449850 WASLO00401 505 aaPredicted RBP16.42■□□□□ 0.22
KDM1B-202ENST00000449850 KNSTRNQ9Y448 316 aa16.42■□□□□ 0.22
KDM1B-202ENST00000449850 SCAF1Q9H7N4 1312 aaKnown RBP16.42■□□□□ 0.22
KDM1B-202ENST00000449850 XRN1Q8IZH2 1706 aaKnown RBP16.42■□□□□ 0.22
KDM1B-202ENST00000449850 ATAD2Q6PL18 1390 aa16.42■□□□□ 0.22
KDM1B-202ENST00000449850 PARD3Q8TEW0 1356 aa16.42■□□□□ 0.22
KDM1B-202ENST00000449850 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
KDM1B-202ENST00000449850 KTN1Q86UP2 1357 aaKnown RBP16.41■□□□□ 0.22
KDM1B-202ENST00000449850 HSPA2P54652 639 aa16.41■□□□□ 0.22
KDM1B-202ENST00000449850 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.4■□□□□ 0.22
KDM1B-202ENST00000449850 RALBP1Q15311 655 aa16.4■□□□□ 0.22
KDM1B-202ENST00000449850 LMTK3Q96Q04 1460 aa16.39■□□□□ 0.21
KDM1B-202ENST00000449850 ANKRD36BQ8N2N9 1353 aa16.39■□□□□ 0.21
KDM1B-202ENST00000449850 NINLQ9Y2I6 1382 aa16.39■□□□□ 0.21
KDM1B-202ENST00000449850 CD163L1Q9NR16 1453 aa16.38■□□□□ 0.21
KDM1B-202ENST00000449850 NPC1L1Q9UHC9 1359 aa16.38■□□□□ 0.21
KDM1B-202ENST00000449850 ADGRB2O60241 1585 aa16.37■□□□□ 0.21
KDM1B-202ENST00000449850 NSD3Q9BZ95 1437 aa16.37■□□□□ 0.21
KDM1B-202ENST00000449850 CABP1Q9NZU7 370 aa16.37■□□□□ 0.21
KDM1B-202ENST00000449850 A0A1W2PP64 1363 aa16.37■□□□□ 0.21
KDM1B-202ENST00000449850 MYBBP1AQ9BQG0 1328 aaKnown RBP16.36■□□□□ 0.21
KDM1B-202ENST00000449850 MRS2Q9HD23 443 aa16.36■□□□□ 0.21
KDM1B-202ENST00000449850 CHD2O14647 1828 aaKnown RBP16.36■□□□□ 0.21
KDM1B-202ENST00000449850 PRR36Q9H6K5 1346 aa16.35■□□□□ 0.21
KDM1B-202ENST00000449850 NUDT16Q96DE0 195 aaKnown RBP16.35■□□□□ 0.21
KDM1B-202ENST00000449850 ATP7BP35670 1465 aa16.34■□□□□ 0.21
KDM1B-202ENST00000449850 PPIP5K1Q6PFW1 1433 aa16.32■□□□□ 0.2
KDM1B-202ENST00000449850 RBM33Q96EV2 1170 aaKnown RBP16.32■□□□□ 0.2
KDM1B-202ENST00000449850 CCDC61Q9Y6R9 512 aa16.32■□□□□ 0.2
KDM1B-202ENST00000449850 TERF2IPQ9NYB0 399 aa16.31■□□□□ 0.2
KDM1B-202ENST00000449850 NUTM2FA1L443 756 aa16.31■□□□□ 0.2
KDM1B-202ENST00000449850 NLRP13Q86W25 1043 aa16.31■□□□□ 0.2
KDM1B-202ENST00000449850 BRD4O60885 1362 aaPredicted RBP16.31■□□□□ 0.2
KDM1B-202ENST00000449850 NWD1Q149M9 1564 aa16.3■□□□□ 0.2
KDM1B-202ENST00000449850 USP32Q8NFA0 1604 aa16.29■□□□□ 0.2
KDM1B-202ENST00000449850 CPSF1Q10570 1443 aaKnown RBP16.29■□□□□ 0.2
KDM1B-202ENST00000449850 CGNL1Q0VF96 1302 aa16.29■□□□□ 0.2
KDM1B-202ENST00000449850 GTF3C3Q9Y5Q9 886 aa16.29■□□□□ 0.2
KDM1B-202ENST00000449850 PPP2R1AP30153 589 aa16.28■□□□□ 0.2
KDM1B-202ENST00000449850 HDGFL2Q7Z4V5 671 aaPredicted RBP16.28■□□□□ 0.2
KDM1B-202ENST00000449850 FAM9BQ8IZU0 186 aa16.28■□□□□ 0.2
KDM1B-202ENST00000449850 PNISRQ8TF01 805 aaKnown RBP16.27■□□□□ 0.2
KDM1B-202ENST00000449850 STRCQ7RTU9 1775 aa16.26■□□□□ 0.19
KDM1B-202ENST00000449850 CDC42BPGQ6DT37 1551 aa16.26■□□□□ 0.19
KDM1B-202ENST00000449850 NALCNQ8IZF0 1738 aa16.26■□□□□ 0.19
KDM1B-202ENST00000449850 TOPAZ1Q8N9V7 1692 aa16.25■□□□□ 0.19
KDM1B-202ENST00000449850 NKTRP30414 1462 aaKnown RBP16.25■□□□□ 0.19
KDM1B-202ENST00000449850 PLEKHG3A1L390 1219 aa16.25■□□□□ 0.19
KDM1B-202ENST00000449850 FYB1O15117 783 aa16.25■□□□□ 0.19
KDM1B-202ENST00000449850 ADGRL3Q9HAR2 1447 aa16.25■□□□□ 0.19
KDM1B-202ENST00000449850 NSD2O96028 1365 aa16.24■□□□□ 0.19
KDM1B-202ENST00000449850 MORC1Q86VD1 984 aa16.24■□□□□ 0.19
KDM1B-202ENST00000449850 GGNBP2Q9H3C7 697 aa16.23■□□□□ 0.19
KDM1B-202ENST00000449850 PROSER2Q86WR7 435 aaPredicted RBP16.23■□□□□ 0.19
KDM1B-202ENST00000449850 ACEP12821 1306 aa16.23■□□□□ 0.19
KDM1B-202ENST00000449850 EDC4Q6P2E9 1401 aaKnown RBP16.22■□□□□ 0.19
KDM1B-202ENST00000449850 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.22■□□□□ 0.19
KDM1B-202ENST00000449850 ANKARQ7Z5J8 1434 aa16.22■□□□□ 0.19
KDM1B-202ENST00000449850 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
KDM1B-202ENST00000449850 TNNT2P45379 298 aaPredicted RBP16.21■□□□□ 0.19
KDM1B-202ENST00000449850 ZNF692Q9BU19 519 aaPredicted RBP16.21■□□□□ 0.19
KDM1B-202ENST00000449850 FMN2Q9NZ56 1722 aa16.21■□□□□ 0.19
KDM1B-202ENST00000449850 PMFBP1Q8TBY8 1022 aa16.21■□□□□ 0.18
KDM1B-202ENST00000449850 POLR3AO14802 1390 aaPredicted RBP16.19■□□□□ 0.18
KDM1B-202ENST00000449850 MON2Q7Z3U7 1717 aa16.19■□□□□ 0.18
KDM1B-202ENST00000449850 RGPD8O14715 1765 aaPredicted RBP16.18■□□□□ 0.18
KDM1B-202ENST00000449850 AKAP12Q02952 1782 aa16.18■□□□□ 0.18
KDM1B-202ENST00000449850 C14orf37Q86TY3 774 aa16.18■□□□□ 0.18
KDM1B-202ENST00000449850 USP6P35125 1406 aa16.18■□□□□ 0.18
KDM1B-202ENST00000449850 TMEM94Q12767 1356 aa16.18■□□□□ 0.18
KDM1B-202ENST00000449850 HNRNPUQ00839 825 aaKnown RBP eCLIP16.18■□□□□ 0.18
KDM1B-202ENST00000449850 NME9Q86XW9 330 aa16.18■□□□□ 0.18
KDM1B-202ENST00000449850 SSH2Q76I76 1423 aa16.17■□□□□ 0.18
KDM1B-202ENST00000449850 ITSN1Q15811 1721 aa16.16■□□□□ 0.18
KDM1B-202ENST00000449850 ZRANB1Q9UGI0 708 aa16.16■□□□□ 0.18
KDM1B-202ENST00000449850 TTC21BQ7Z4L5 1316 aa16.16■□□□□ 0.18
KDM1B-202ENST00000449850 NRKQ7Z2Y5 1582 aa16.16■□□□□ 0.18
KDM1B-202ENST00000449850 C19orf44Q9H6X5 657 aa16.16■□□□□ 0.18
KDM1B-202ENST00000449850 ZNF335Q9H4Z2 1342 aaPredicted RBP16.15■□□□□ 0.18
KDM1B-202ENST00000449850 NGDNQ8NEJ9 315 aaKnown RBP16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms