RNA–Protein interactions for RNA: ENST00000449510.6

UBE3B-204, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 5

Gene UBE3B, Length 3,771 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-204ENST00000449510 PODXL2Q9NZ53 605 aa15.24■□□□□ 0.03
UBE3B-204ENST00000449510 EFCAB5A4FU69 1503 aa15.23■□□□□ 0.03
UBE3B-204ENST00000449510 C9orf84Q5VXU9 1444 aa15.23■□□□□ 0.03
UBE3B-204ENST00000449510 CCDC27Q2M243 656 aa15.23■□□□□ 0.03
UBE3B-204ENST00000449510 NPM1P06748 294 aaKnown RBP eCLIP15.23■□□□□ 0.03
UBE3B-204ENST00000449510 ZNF428Q96B54 188 aa15.23■□□□□ 0.03
UBE3B-204ENST00000449510 GDPD2Q9HCC8 539 aa15.23■□□□□ 0.03
UBE3B-204ENST00000449510 NKTRP30414 1462 aaKnown RBP15.22■□□□□ 0.03
UBE3B-204ENST00000449510 FGD1P98174 961 aa15.22■□□□□ 0.03
UBE3B-204ENST00000449510 SYAP1Q96A49 352 aaPredicted RBP15.22■□□□□ 0.03
UBE3B-204ENST00000449510 SPATA31E1Q6ZUB1 1445 aa15.22■□□□□ 0.03
UBE3B-204ENST00000449510 FAM177BA6PVY3 158 aa15.22■□□□□ 0.03
UBE3B-204ENST00000449510 KANK1Q14678 1352 aa15.21■□□□□ 0.03
UBE3B-204ENST00000449510 NUCB2P80303 420 aa15.21■□□□□ 0.03
UBE3B-204ENST00000449510 SPC24Q8NBT2 197 aa15.21■□□□□ 0.03
UBE3B-204ENST00000449510 DIAPH1O60610 1272 aaKnown RBP15.21■□□□□ 0.03
UBE3B-204ENST00000449510 MLECQ14165 292 aa15.21■□□□□ 0.03
UBE3B-204ENST00000449510 HDGFL2Q7Z4V5 671 aaPredicted RBP15.21■□□□□ 0.03
UBE3B-204ENST00000449510 ROCK1Q13464 1354 aa15.21■□□□□ 0.02
UBE3B-204ENST00000449510 ZNF830Q96NB3 372 aaPredicted RBP15.2■□□□□ 0.02
UBE3B-204ENST00000449510 CDC45O75419 566 aa15.2■□□□□ 0.02
UBE3B-204ENST00000449510 TOPBP1Q92547 1522 aa15.2■□□□□ 0.02
UBE3B-204ENST00000449510 RSPH4AQ5TD94 716 aa15.2■□□□□ 0.02
UBE3B-204ENST00000449510 LARP6Q9BRS8 491 aaKnown RBP15.2■□□□□ 0.02
UBE3B-204ENST00000449510 SMARCA5O60264 1052 aaPredicted RBP15.19■□□□□ 0.02
UBE3B-204ENST00000449510 CBX1P83916 185 aa15.19■□□□□ 0.02
UBE3B-204ENST00000449510 IGSF3O75054 1194 aa15.19■□□□□ 0.02
UBE3B-204ENST00000449510 PRKAR2BP31323 418 aa15.19■□□□□ 0.02
UBE3B-204ENST00000449510 GAS2L3Q86XJ1 694 aa15.19■□□□□ 0.02
UBE3B-204ENST00000449510 FBXW7Q969H0 707 aa15.19■□□□□ 0.02
UBE3B-204ENST00000449510 CHAMP1Q96JM3 812 aa15.19■□□□□ 0.02
UBE3B-204ENST00000449510 NPHP1O15259 732 aa15.18■□□□□ 0.02
UBE3B-204ENST00000449510 DTNBO60941 627 aa15.18■□□□□ 0.02
UBE3B-204ENST00000449510 ZNF771Q7L3S4 317 aaPredicted RBP15.18■□□□□ 0.02
UBE3B-204ENST00000449510 PDCL3Q9H2J4 239 aa15.17■□□□□ 0.02
UBE3B-204ENST00000449510 ZRSR1Q15695 479 aaKnown RBP15.17■□□□□ 0.02
UBE3B-204ENST00000449510 UPF3BQ9BZI7 483 aaKnown RBP15.17■□□□□ 0.02
UBE3B-204ENST00000449510 ESF1Q9H501 851 aaKnown RBP15.17■□□□□ 0.02
UBE3B-204ENST00000449510 TERF2IPQ9NYB0 399 aa15.17■□□□□ 0.02
UBE3B-204ENST00000449510 GAS2L2Q8NHY3 880 aa15.16■□□□□ 0.02
UBE3B-204ENST00000449510 KIF16BQ96L93 1317 aa15.16■□□□□ 0.02
UBE3B-204ENST00000449510 BAG4O95429 457 aaKnown RBP15.16■□□□□ 0.02
UBE3B-204ENST00000449510 FIBPO43427 364 aa15.16■□□□□ 0.02
UBE3B-204ENST00000449510 NGEFQ8N5V2 710 aa15.16■□□□□ 0.02
UBE3B-204ENST00000449510 INTS3Q68E01 1043 aaKnown RBP15.15■□□□□ 0.02
UBE3B-204ENST00000449510 TBC1D9Q6ZT07 1266 aa15.15■□□□□ 0.02
UBE3B-204ENST00000449510 VPS37CA5D8V6 355 aaPredicted RBP15.15■□□□□ 0.02
UBE3B-204ENST00000449510 DCTN1Q14203 1278 aa15.15■□□□□ 0.02
UBE3B-204ENST00000449510 REC8O95072 547 aa15.15■□□□□ 0.02
UBE3B-204ENST00000449510 TSHZ3Q63HK5 1081 aa15.15■□□□□ 0.02
UBE3B-204ENST00000449510 WDR63Q8IWG1 891 aa15.15■□□□□ 0.02
UBE3B-204ENST00000449510 CCDC9Q9Y3X0 531 aaKnown RBP15.15■□□□□ 0.02
UBE3B-204ENST00000449510 TEX14Q8IWB6 1497 aa15.15■□□□□ 0.02
UBE3B-204ENST00000449510 TMPOP42166 694 aaKnown RBP15.14■□□□□ 0.01
UBE3B-204ENST00000449510 THOC2Q8NI27 1593 aaKnown RBP15.14■□□□□ 0.01
UBE3B-204ENST00000449510 KDM6BO15054 1643 aa15.14■□□□□ 0.01
UBE3B-204ENST00000449510 RTF1Q92541 710 aaKnown RBP15.14■□□□□ 0.01
UBE3B-204ENST00000449510 TSC1Q92574 1164 aa15.14■□□□□ 0.01
UBE3B-204ENST00000449510 CSPP1Q1MSJ5 1256 aa15.14■□□□□ 0.01
UBE3B-204ENST00000449510 MAP4K4O95819 1239 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-204ENST00000449510 CARD14Q9BXL6 1004 aa15.13■□□□□ 0.01
UBE3B-204ENST00000449510 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.13■□□□□ 0.01
UBE3B-204ENST00000449510 TROQ12816 1431 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-204ENST00000449510 SPDYE4A6NLX3 237 aa15.13■□□□□ 0.01
UBE3B-204ENST00000449510 PRIM1P49642 420 aaKnown RBP15.13■□□□□ 0.01
UBE3B-204ENST00000449510 C16orf71Q8IYS4 520 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-204ENST00000449510 LTV1Q96GA3 475 aaPredicted RBP15.13■□□□□ 0.01
UBE3B-204ENST00000449510 PLB1Q6P1J6 1458 aa15.13■□□□□ 0.01
UBE3B-204ENST00000449510 DDX54Q8TDD1 881 aaKnown RBP15.12■□□□□ 0.01
UBE3B-204ENST00000449510 EVC2Q86UK5 1308 aa15.12■□□□□ 0.01
UBE3B-204ENST00000449510 FOSBP53539 338 aa15.12■□□□□ 0.01
UBE3B-204ENST00000449510 CCDC39Q9UFE4 941 aa15.12■□□□□ 0.01
UBE3B-204ENST00000449510 PTPRGP23470 1445 aa15.12■□□□□ 0.01
UBE3B-204ENST00000449510 HMMRO75330 724 aa15.12■□□□□ 0.01
UBE3B-204ENST00000449510 RABEP1Q15276 862 aa15.11■□□□□ 0.01
UBE3B-204ENST00000449510 TWISTNBQ3B726 338 aaPredicted RBP15.11■□□□□ 0.01
UBE3B-204ENST00000449510 IFT57Q9NWB7 429 aa15.11■□□□□ 0.01
UBE3B-204ENST00000449510 USP19O94966 1318 aa15.11■□□□□ 0.01
UBE3B-204ENST00000449510 CAMSAP2Q08AD1 1489 aa15.11■□□□□ 0.01
UBE3B-204ENST00000449510 ADGRF5Q8IZF2 1346 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 PHF14O94880 888 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 ZGPATQ8N5A5 531 aaKnown RBP15.1■□□□□ 0.01
UBE3B-204ENST00000449510 USP25Q9UHP3 1055 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 ERCC6Q03468 1493 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 SNAPC4Q5SXM2 1469 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 ARHGEF11O15085 1522 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 AAMPQ13685 434 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 TSPY26PQ9H489 355 aa15.1■□□□□ 0.01
UBE3B-204ENST00000449510 CIZ1Q9ULV3 898 aaPredicted RBP15.1■□□□□ 0.01
UBE3B-204ENST00000449510 NSD3Q9BZ95 1437 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 ZSCAN23Q3MJ62 389 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 GRIN2BQ13224 1484 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 STK31Q9BXU1 1019 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 MIS18AQ9NYP9 233 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 LMOD2Q6P5Q4 547 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 ERBB4Q15303 1308 aa15.09■□□□□ 0.01
UBE3B-204ENST00000449510 UGGT2Q9NYU1 1516 aa15.08■□□□□ 0.01
UBE3B-204ENST00000449510 ANTXR1Q9H6X2 564 aa15.08■□□□□ 0.01
UBE3B-204ENST00000449510 ISY1Q9ULR0 285 aaKnown RBP15.08■□□□□ 0.01
UBE3B-204ENST00000449510 GPRASP1Q5JY77 1395 aa15.08■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms