RNA–Protein interactions for RNA: ENST00000449086.5

LINC00954-202, long intergenic non-protein coding RNA 954, humanhuman

TSL 1 (best) BASIC

Gene LINC00954, Length 2,995 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00954-202ENST00000449086 NWD1Q149M9 1564 aa10.88□□□□□ -0.67
LINC00954-202ENST00000449086 ADGRF5Q8IZF2 1346 aa10.88□□□□□ -0.67
LINC00954-202ENST00000449086 NBPF8Q3BBV2 869 aa10.88□□□□□ -0.67
LINC00954-202ENST00000449086 EIF4G2P78344 907 aaKnown RBP eCLIP10.87□□□□□ -0.67
LINC00954-202ENST00000449086 NEFMP07197 916 aa10.87□□□□□ -0.67
LINC00954-202ENST00000449086 C14orf93Q9H972 538 aaKnown RBP10.87□□□□□ -0.67
LINC00954-202ENST00000449086 TRPM1Q7Z4N2 1603 aa10.87□□□□□ -0.67
LINC00954-202ENST00000449086 EIF5BO60841 1220 aaKnown RBP10.86□□□□□ -0.67
LINC00954-202ENST00000449086 PRKRIP1Q9H875 184 aaPredicted RBP10.86□□□□□ -0.67
LINC00954-202ENST00000449086 KNDC1Q76NI1 1749 aa10.86□□□□□ -0.67
LINC00954-202ENST00000449086 ZBED9Q6R2W3 1325 aa10.85□□□□□ -0.67
LINC00954-202ENST00000449086 RALGAPBQ86X10 1494 aa10.85□□□□□ -0.67
LINC00954-202ENST00000449086 CHD2O14647 1828 aaKnown RBP10.85□□□□□ -0.67
LINC00954-202ENST00000449086 ADGRB1O14514 1584 aa10.85□□□□□ -0.67
LINC00954-202ENST00000449086 NKTRP30414 1462 aaKnown RBP10.85□□□□□ -0.67
LINC00954-202ENST00000449086 XRN1Q8IZH2 1706 aaKnown RBP10.85□□□□□ -0.67
LINC00954-202ENST00000449086 CPS1P31327 1500 aa10.84□□□□□ -0.67
LINC00954-202ENST00000449086 ASXL1Q8IXJ9 1541 aa10.84□□□□□ -0.67
LINC00954-202ENST00000449086 GPRASP1Q5JY77 1395 aa10.84□□□□□ -0.67
LINC00954-202ENST00000449086 TECPR2O15040 1411 aa10.84□□□□□ -0.67
LINC00954-202ENST00000449086 DLC1Q96QB1 1528 aa10.83□□□□□ -0.68
LINC00954-202ENST00000449086 NUTM2DQ5VT03 806 aaPredicted RBP10.83□□□□□ -0.68
LINC00954-202ENST00000449086 KDM2AQ9Y2K7 1162 aa10.83□□□□□ -0.68
LINC00954-202ENST00000449086 PTCH1Q13635 1447 aa10.83□□□□□ -0.68
LINC00954-202ENST00000449086 LRPPRCP42704 1394 aaKnown RBP10.82□□□□□ -0.68
LINC00954-202ENST00000449086 SIRT1Q96EB6 747 aa10.82□□□□□ -0.68
LINC00954-202ENST00000449086 NCOA3Q9Y6Q9 1424 aa10.81□□□□□ -0.68
LINC00954-202ENST00000449086 ABCC11Q96J66 1382 aa10.81□□□□□ -0.68
LINC00954-202ENST00000449086 KCNA6P17658 529 aa10.81□□□□□ -0.68
LINC00954-202ENST00000449086 METP08581 1390 aa10.81□□□□□ -0.68
LINC00954-202ENST00000449086 YTHDC2Q9H6S0 1430 aaKnown RBP10.81□□□□□ -0.68
LINC00954-202ENST00000449086 CFAP70Q5T0N1 1121 aa10.8□□□□□ -0.68
LINC00954-202ENST00000449086 SLC26A8Q96RN1 970 aa10.8□□□□□ -0.68
LINC00954-202ENST00000449086 FAM135BQ49AJ0 1406 aa10.8□□□□□ -0.68
LINC00954-202ENST00000449086 IQSEC2Q5JU85 1478 aa10.8□□□□□ -0.68
LINC00954-202ENST00000449086 PTPRUQ92729 1446 aa10.79□□□□□ -0.68
LINC00954-202ENST00000449086 LTBP4Q8N2S1 1624 aa10.79□□□□□ -0.68
LINC00954-202ENST00000449086 STRCP1A6NGW2 1772 aa10.79□□□□□ -0.68
LINC00954-202ENST00000449086 ROCK2O75116 1388 aaKnown RBP10.78□□□□□ -0.68
LINC00954-202ENST00000449086 NUDCQ9Y266 331 aa10.77□□□□□ -0.68
LINC00954-202ENST00000449086 ARHGEF28Q8N1W1 1705 aaKnown RBP10.77□□□□□ -0.68
LINC00954-202ENST00000449086 CCDC7Q96M83 1385 aa10.77□□□□□ -0.69
LINC00954-202ENST00000449086 BRPF3Q9ULD4 1205 aa10.77□□□□□ -0.69
LINC00954-202ENST00000449086 AMOTL2Q9Y2J4 779 aa10.77□□□□□ -0.69
LINC00954-202ENST00000449086 EIF3AQ14152 1382 aaKnown RBP10.77□□□□□ -0.69
LINC00954-202ENST00000449086 LRRC7Q96NW7 1537 aa10.75□□□□□ -0.69
LINC00954-202ENST00000449086 KIF7Q2M1P5 1343 aa10.75□□□□□ -0.69
LINC00954-202ENST00000449086 ZNF335Q9H4Z2 1342 aaPredicted RBP10.75□□□□□ -0.69
LINC00954-202ENST00000449086 ADGRB2O60241 1585 aa10.74□□□□□ -0.69
LINC00954-202ENST00000449086 NBPF1Q3BBV0 1214 aa10.74□□□□□ -0.69
LINC00954-202ENST00000449086 DCCP43146 1447 aa10.74□□□□□ -0.69
LINC00954-202ENST00000449086 TMEM132EQ6IEE7 984 aa10.74□□□□□ -0.69
LINC00954-202ENST00000449086 ROBO2Q9HCK4 1378 aa10.73□□□□□ -0.69
LINC00954-202ENST00000449086 SBNO2Q9Y2G9 1366 aa10.73□□□□□ -0.69
LINC00954-202ENST00000449086 SLC24A1O60721 1099 aa10.73□□□□□ -0.69
LINC00954-202ENST00000449086 CARD11Q9BXL7 1154 aa10.73□□□□□ -0.69
LINC00954-202ENST00000449086 XIRP1Q702N8 1843 aaKnown RBP10.73□□□□□ -0.69
LINC00954-202ENST00000449086 PDE4AP27815 886 aa10.72□□□□□ -0.69
LINC00954-202ENST00000449086 TMC1Q8TDI8 760 aa10.72□□□□□ -0.69
LINC00954-202ENST00000449086 DAXXQ9UER7 740 aaPredicted RBP10.72□□□□□ -0.69
LINC00954-202ENST00000449086 ADGRL3Q9HAR2 1447 aa10.72□□□□□ -0.69
LINC00954-202ENST00000449086 CDC42BPGQ6DT37 1551 aa10.72□□□□□ -0.69
LINC00954-202ENST00000449086 EXOC6Q8TAG9 804 aa10.71□□□□□ -0.69
LINC00954-202ENST00000449086 SLC4A3P48751 1232 aa10.71□□□□□ -0.69
LINC00954-202ENST00000449086 QRICH2Q9H0J4 1663 aa10.71□□□□□ -0.7
LINC00954-202ENST00000449086 PPM1GO15355 546 aaPredicted RBP10.71□□□□□ -0.7
LINC00954-202ENST00000449086 PROSER2Q86WR7 435 aaPredicted RBP10.71□□□□□ -0.7
LINC00954-202ENST00000449086 NALCNQ8IZF0 1738 aa10.7□□□□□ -0.7
LINC00954-202ENST00000449086 SMG6Q86US8 1419 aaKnown RBP10.7□□□□□ -0.7
LINC00954-202ENST00000449086 TMEM94Q12767 1356 aa10.7□□□□□ -0.7
LINC00954-202ENST00000449086 SKAP1Q86WV1 359 aa10.7□□□□□ -0.7
LINC00954-202ENST00000449086 USP35Q9P2H5 1018 aa10.7□□□□□ -0.7
LINC00954-202ENST00000449086 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.69□□□□□ -0.7
LINC00954-202ENST00000449086 USP47Q96K76 1375 aa10.69□□□□□ -0.7
LINC00954-202ENST00000449086 CENPJQ9HC77 1338 aaPredicted RBP10.69□□□□□ -0.7
LINC00954-202ENST00000449086 TRAK1Q9UPV9 953 aa10.69□□□□□ -0.7
LINC00954-202ENST00000449086 STK26Q9P289 416 aa10.69□□□□□ -0.7
LINC00954-202ENST00000449086 PRAM1Q96QH2 718 aa10.68□□□□□ -0.7
LINC00954-202ENST00000449086 MSH6P52701 1360 aa10.68□□□□□ -0.7
LINC00954-202ENST00000449086 POGKQ9P215 609 aa10.68□□□□□ -0.7
LINC00954-202ENST00000449086 TCERG1O14776 1098 aaKnown RBP10.68□□□□□ -0.7
LINC00954-202ENST00000449086 GSE1Q14687 1217 aa10.68□□□□□ -0.7
LINC00954-202ENST00000449086 C19orf44Q9H6X5 657 aa10.68□□□□□ -0.7
LINC00954-202ENST00000449086 PLEKHH1Q9ULM0 1364 aa10.67□□□□□ -0.7
LINC00954-202ENST00000449086 FMN2Q9NZ56 1722 aa10.67□□□□□ -0.7
LINC00954-202ENST00000449086 PUS7Q96PZ0 661 aaKnown RBP10.66□□□□□ -0.7
LINC00954-202ENST00000449086 ANKARQ7Z5J8 1434 aa10.66□□□□□ -0.7
LINC00954-202ENST00000449086 CERKQ8TCT0 537 aa10.66□□□□□ -0.7
LINC00954-202ENST00000449086 UBE2Q2Q8WVN8 375 aa10.66□□□□□ -0.7
LINC00954-202ENST00000449086 BACH2Q9BYV9 841 aa10.65□□□□□ -0.7
LINC00954-202ENST00000449086 WAPLQ7Z5K2 1190 aa10.65□□□□□ -0.7
LINC00954-202ENST00000449086 CADPS2Q86UW7 1296 aa10.65□□□□□ -0.7
LINC00954-202ENST00000449086 TULP4Q9NRJ4 1543 aa10.65□□□□□ -0.7
LINC00954-202ENST00000449086 RRP1P56182 461 aaKnown RBP10.65□□□□□ -0.71
LINC00954-202ENST00000449086 NFKBIBQ15653 356 aa10.64□□□□□ -0.71
LINC00954-202ENST00000449086 FRAT1Q92837 279 aaPredicted RBP10.64□□□□□ -0.71
LINC00954-202ENST00000449086 PLIN1O60240 522 aa10.64□□□□□ -0.71
LINC00954-202ENST00000449086 RCAN3Q9UKA8 241 aa10.63□□□□□ -0.71
LINC00954-202ENST00000449086 ITSN1Q15811 1721 aa10.63□□□□□ -0.71
LINC00954-202ENST00000449086 TESK2Q96S53 571 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms