RNA–Protein interactions for RNA: ENST00000448637.5

LPP-208, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 5 BASIC

Gene LPP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-208ENST00000448637 TBC1D2BQ9UPU7 963 aa9.96□□□□□ -0.82
LPP-208ENST00000448637 ELL2O00472 640 aaPredicted RBP9.96□□□□□ -0.82
LPP-208ENST00000448637 TRIM21P19474 475 aaKnown RBP9.96□□□□□ -0.82
LPP-208ENST00000448637 DDX19BQ9UMR2 479 aa9.96□□□□□ -0.82
LPP-208ENST00000448637 MTERF4Q7Z6M4 381 aaKnown RBP9.95□□□□□ -0.82
LPP-208ENST00000448637 UACAQ9BZF9 1416 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 PSMA5P28066 241 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 RABEP1Q15276 862 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 GOLGA6L10A6NI86 522 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 INTS3Q68E01 1043 aaKnown RBP9.95□□□□□ -0.82
LPP-208ENST00000448637 DNAI2Q9GZS0 605 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 DHX8Q14562 1220 aaKnown RBP9.95□□□□□ -0.82
LPP-208ENST00000448637 PLCD4Q9BRC7 762 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 EVC2Q86UK5 1308 aa9.95□□□□□ -0.82
LPP-208ENST00000448637 ZNHIT6Q9NWK9 470 aaKnown RBP9.94□□□□□ -0.82
LPP-208ENST00000448637 BAZ1BQ9UIG0 1483 aaKnown RBP9.94□□□□□ -0.82
LPP-208ENST00000448637 PSME1Q06323 249 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 SDF4Q9BRK5 362 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 RAPGEF4Q8WZA2 1011 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 PDE4AP27815 886 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 NEUROD6Q96NK8 337 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 MPHOSPH9Q99550 1183 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 INCENPQ9NQS7 918 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 PODXL2Q9NZ53 605 aa9.94□□□□□ -0.82
LPP-208ENST00000448637 SF3B2Q13435 895 aaKnown RBP9.93□□□□□ -0.82
LPP-208ENST00000448637 VGFO15240 615 aaPredicted RBP9.93□□□□□ -0.82
LPP-208ENST00000448637 LETM1O95202 739 aaPredicted RBP9.93□□□□□ -0.82
LPP-208ENST00000448637 NINLQ9Y2I6 1382 aa9.93□□□□□ -0.82
LPP-208ENST00000448637 FKBP5Q13451 457 aaPredicted RBP9.93□□□□□ -0.82
LPP-208ENST00000448637 NUTM2DQ5VT03 806 aaPredicted RBP9.93□□□□□ -0.82
LPP-208ENST00000448637 ENOX2Q16206 610 aaKnown RBP9.93□□□□□ -0.82
LPP-208ENST00000448637 KIF7Q2M1P5 1343 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 RIC3Q7Z5B4 369 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 TRAK1Q9UPV9 953 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 KIF15Q9NS87 1388 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 FAM13BQ9NYF5 915 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 RRP7AQ9Y3A4 280 aaKnown RBP9.92□□□□□ -0.82
LPP-208ENST00000448637 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.92□□□□□ -0.82
LPP-208ENST00000448637 CCDC66A2RUB6 948 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 CT47B1P0C2W7 299 aaPredicted RBP9.92□□□□□ -0.82
LPP-208ENST00000448637 SKIDA1Q1XH10 827 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 AXDND1Q5T1B0 1012 aaPredicted RBP9.92□□□□□ -0.82
LPP-208ENST00000448637 LEKR1Q6ZMV7 388 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 GBP2P32456 591 aaPredicted RBP9.92□□□□□ -0.82
LPP-208ENST00000448637 FAM43AQ8N2R8 423 aa9.92□□□□□ -0.82
LPP-208ENST00000448637 FOSBP53539 338 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 CCDC39Q9UFE4 941 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 CARMIL1Q5VZK9 1371 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 SLC4A3P48751 1232 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 GNL3LQ9NVN8 582 aaKnown RBP9.91□□□□□ -0.82
LPP-208ENST00000448637 MTMR7Q9Y216 660 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 STIM1Q13586 685 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 TTLL5Q6EMB2 1281 aa9.91□□□□□ -0.82
LPP-208ENST00000448637 KIAA0754O94854 1291 aa9.9□□□□□ -0.82
LPP-208ENST00000448637 MYBBP1AQ9BQG0 1328 aaKnown RBP9.9□□□□□ -0.82
LPP-208ENST00000448637 CCDC112Q8NEF3 446 aa9.9□□□□□ -0.82
LPP-208ENST00000448637 MPHOSPH10O00566 681 aaKnown RBP9.9□□□□□ -0.82
LPP-208ENST00000448637 DIAPH1O60610 1272 aaKnown RBP9.9□□□□□ -0.82
LPP-208ENST00000448637 RB1CC1Q8TDY2 1594 aa9.9□□□□□ -0.83
LPP-208ENST00000448637 ZNF396Q96N95 335 aaPredicted RBP9.9□□□□□ -0.83
LPP-208ENST00000448637 DACH1Q9UI36 760 aa9.9□□□□□ -0.83
LPP-208ENST00000448637 KINO60870 393 aaKnown RBP9.89□□□□□ -0.83
LPP-208ENST00000448637 ATF3P18847 181 aa9.89□□□□□ -0.83
LPP-208ENST00000448637 PPM1FP49593 454 aaPredicted RBP9.89□□□□□ -0.83
LPP-208ENST00000448637 HMGB2P26583 209 aaKnown RBP9.89□□□□□ -0.83
LPP-208ENST00000448637 HIP1O00291 1037 aa9.89□□□□□ -0.83
LPP-208ENST00000448637 CCDC181Q5TID7 509 aa9.89□□□□□ -0.83
LPP-208ENST00000448637 JMYQ8N9B5 988 aa9.89□□□□□ -0.83
LPP-208ENST00000448637 HSP90AB3PQ58FF7 597 aa9.89□□□□□ -0.83
LPP-208ENST00000448637 WDHD1O75717 1129 aaPredicted RBP9.88□□□□□ -0.83
LPP-208ENST00000448637 SMC2O95347 1197 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 DEF6Q9H4E7 631 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 KIF6Q6ZMV9 814 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 CNTROBQ8N137 903 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 DZIP1LQ8IYY4 767 aaKnown RBP9.88□□□□□ -0.83
LPP-208ENST00000448637 NECTIN2Q92692 538 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 BCL2L13Q9BXK5 485 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 POTEJP0CG39 1038 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 PDCP20941 246 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 GNAI1P63096 354 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 CCDC91Q7Z6B0 441 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 TSPYL4Q9UJ04 414 aa9.88□□□□□ -0.83
LPP-208ENST00000448637 VPS8Q8N3P4 1428 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 SOGA3Q5TF21 947 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 PLIN1O60240 522 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 STAMBPO95630 424 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 CETN2P41208 172 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 IQCEQ6IPM2 695 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 FSD1Q9BTV5 496 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 HMGN5P82970 282 aaKnown RBP9.87□□□□□ -0.83
LPP-208ENST00000448637 BMP2KQ9NSY1 1161 aaPredicted RBP9.87□□□□□ -0.83
LPP-208ENST00000448637 ZBED9Q6R2W3 1325 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 ERC1Q8IUD2 1116 aa9.87□□□□□ -0.83
LPP-208ENST00000448637 GRIPAP1Q4V328 841 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 PPFIBP1Q86W92 1011 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 TRIM5Q9C035 493 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 UBTFL1P0CB47 393 aaPredicted RBP9.86□□□□□ -0.83
LPP-208ENST00000448637 FMN1Q68DA7 1419 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 STK11IPQ8N1F8 1099 aa9.86□□□□□ -0.83
LPP-208ENST00000448637 ERLIN1O75477 346 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms