RNA–Protein interactions for RNA: ENST00000448223.6

SMC6-207, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,233 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-207ENST00000448223 AK7Q96M32 723 aa11.27□□□□□ -0.61
SMC6-207ENST00000448223 RAPGEF6Q8TEU7 1601 aa11.27□□□□□ -0.61
SMC6-207ENST00000448223 ITPRIPQ8IWB1 547 aa11.27□□□□□ -0.61
SMC6-207ENST00000448223 PMFBP1Q8TBY8 1022 aa11.27□□□□□ -0.61
SMC6-207ENST00000448223 MRC2Q9UBG0 1479 aa11.27□□□□□ -0.61
SMC6-207ENST00000448223 SPAG9O60271 1321 aaKnown RBP11.26□□□□□ -0.61
SMC6-207ENST00000448223 BECN2A8MW95 431 aa11.26□□□□□ -0.61
SMC6-207ENST00000448223 MEX3CQ5U5Q3 659 aaKnown RBP11.26□□□□□ -0.61
SMC6-207ENST00000448223 IFT57Q9NWB7 429 aa11.26□□□□□ -0.61
SMC6-207ENST00000448223 ADAMTS12P58397 1594 aa11.26□□□□□ -0.61
SMC6-207ENST00000448223 OS9Q13438 667 aaPredicted RBP11.26□□□□□ -0.61
SMC6-207ENST00000448223 BCORL1Q5H9F3 1711 aa11.26□□□□□ -0.61
SMC6-207ENST00000448223 MAPK8IP3Q9UPT6 1336 aa11.25□□□□□ -0.61
SMC6-207ENST00000448223 CCDC34Q96HJ3 373 aa11.25□□□□□ -0.61
SMC6-207ENST00000448223 KIF3AQ9Y496 699 aa11.25□□□□□ -0.61
SMC6-207ENST00000448223 ST18O60284 1047 aa11.25□□□□□ -0.61
SMC6-207ENST00000448223 IRX3P78415 501 aaPredicted RBP11.25□□□□□ -0.61
SMC6-207ENST00000448223 LRPPRCP42704 1394 aaKnown RBP11.25□□□□□ -0.61
SMC6-207ENST00000448223 DISP3Q9P2K9 1392 aa11.25□□□□□ -0.61
SMC6-207ENST00000448223 UQCRHLA0A096LP55 91 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 UQCRHP07919 91 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 CGNQ9P2M7 1197 aaKnown RBP11.24□□□□□ -0.61
SMC6-207ENST00000448223 PBRM1Q86U86 1689 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 KIF14Q15058 1648 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 FOXD4L5Q5VV16 416 aaPredicted RBP11.24□□□□□ -0.61
SMC6-207ENST00000448223 FOXD4L4Q8WXT5 416 aaPredicted RBP11.24□□□□□ -0.61
SMC6-207ENST00000448223 PRDM10Q9NQV6 1147 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 ZHX1Q9UKY1 873 aaPredicted RBP11.24□□□□□ -0.61
SMC6-207ENST00000448223 NPM1P06748 294 aaKnown RBP eCLIP11.24□□□□□ -0.61
SMC6-207ENST00000448223 KIAA0556O60303 1618 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 CDR1P51861 262 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 RUFY1Q96T51 708 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 SMC4Q9NTJ3 1288 aa11.24□□□□□ -0.61
SMC6-207ENST00000448223 DCTN1Q14203 1278 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 GIMAP7Q8NHV1 300 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 DYDC1Q8WWB3 177 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 SLC12A5Q9H2X9 1139 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 DISP1Q96F81 1524 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 POGKQ9P215 609 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 GRIN2AQ12879 1464 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 IFT140Q96RY7 1462 aa11.23□□□□□ -0.61
SMC6-207ENST00000448223 CCDC173Q0VFZ6 552 aa11.22□□□□□ -0.61
SMC6-207ENST00000448223 GPATCH11Q8N954 259 aa11.22□□□□□ -0.61
SMC6-207ENST00000448223 ERBINQ96RT1 1412 aa11.22□□□□□ -0.61
SMC6-207ENST00000448223 KDM5CP41229 1560 aa11.22□□□□□ -0.61
SMC6-207ENST00000448223 ESPNB1AK53 854 aa11.22□□□□□ -0.61
SMC6-207ENST00000448223 ERICH4A6NGS2 130 aa11.21□□□□□ -0.61
SMC6-207ENST00000448223 HSP90B1P14625 803 aaKnown RBP11.21□□□□□ -0.61
SMC6-207ENST00000448223 ATP6V1DQ9Y5K8 247 aa11.21□□□□□ -0.61
SMC6-207ENST00000448223 TARBP1Q13395 1621 aaKnown RBP11.21□□□□□ -0.61
SMC6-207ENST00000448223 PARD3Q8TEW0 1356 aa11.21□□□□□ -0.61
SMC6-207ENST00000448223 E9PSI1 815 aa11.21□□□□□ -0.62
SMC6-207ENST00000448223 CHMP4AQ9BY43 222 aa11.21□□□□□ -0.62
SMC6-207ENST00000448223 CALCOCO1Q9P1Z2 691 aa11.21□□□□□ -0.62
SMC6-207ENST00000448223 RSPH4AQ5TD94 716 aa11.2□□□□□ -0.62
SMC6-207ENST00000448223 TSR2Q969E8 191 aaKnown RBP11.2□□□□□ -0.62
SMC6-207ENST00000448223 SPINK5Q9NQ38 1064 aaPredicted RBP11.2□□□□□ -0.62
SMC6-207ENST00000448223 ERCC4Q92889 916 aaPredicted RBP11.2□□□□□ -0.62
SMC6-207ENST00000448223 DUSP27Q5VZP5 1158 aa11.2□□□□□ -0.62
SMC6-207ENST00000448223 TCP11L2Q8N4U5 519 aa11.2□□□□□ -0.62
SMC6-207ENST00000448223 ITSN2Q9NZM3 1697 aa11.19□□□□□ -0.62
SMC6-207ENST00000448223 MBD5Q9P267 1494 aa11.19□□□□□ -0.62
SMC6-207ENST00000448223 UHRF1BP1Q6BDS2 1440 aa11.19□□□□□ -0.62
SMC6-207ENST00000448223 TSR1Q2NL82 804 aaKnown RBP11.19□□□□□ -0.62
SMC6-207ENST00000448223 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.19□□□□□ -0.62
SMC6-207ENST00000448223 MAGI1Q96QZ7 1491 aaPredicted RBP11.19□□□□□ -0.62
SMC6-207ENST00000448223 MTHFSP49914 203 aa11.19□□□□□ -0.62
SMC6-207ENST00000448223 TNNQ9UQP3 1299 aa11.19□□□□□ -0.62
SMC6-207ENST00000448223 PER1O15534 1290 aaPredicted RBP11.19□□□□□ -0.62
SMC6-207ENST00000448223 MLECQ14165 292 aa11.19□□□□□ -0.62
SMC6-207ENST00000448223 BCL11BQ9C0K0 894 aaPredicted RBP11.19□□□□□ -0.62
SMC6-207ENST00000448223 TPM1P09493 284 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 IPO8O15397 1037 aaKnown RBP11.18□□□□□ -0.62
SMC6-207ENST00000448223 TRAK2O60296 914 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 KIAA0754O94854 1291 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 IGHDP01880 384 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 NOL8Q76FK4 1167 aaKnown RBP11.18□□□□□ -0.62
SMC6-207ENST00000448223 WASHC2CQ9Y4E1 1318 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 CREBRFQ8IUR6 639 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 GGNBP2Q9H3C7 697 aa11.18□□□□□ -0.62
SMC6-207ENST00000448223 NUTM2FA1L443 756 aa11.17□□□□□ -0.62
SMC6-207ENST00000448223 RBM25P49756 843 aaKnown RBP11.17□□□□□ -0.62
SMC6-207ENST00000448223 ISY1Q9ULR0 285 aaKnown RBP11.17□□□□□ -0.62
SMC6-207ENST00000448223 PRAG1Q86YV5 1406 aa11.17□□□□□ -0.62
SMC6-207ENST00000448223 CLSTN1O94985 981 aa11.17□□□□□ -0.62
SMC6-207ENST00000448223 CBX1P83916 185 aa11.17□□□□□ -0.62
SMC6-207ENST00000448223 IPO4Q8TEX9 1081 aaKnown RBP11.17□□□□□ -0.62
SMC6-207ENST00000448223 TPD52L1Q16890 204 aaPredicted RBP11.16□□□□□ -0.62
SMC6-207ENST00000448223 PAXIP1Q6ZW49 1069 aaPredicted RBP11.16□□□□□ -0.62
SMC6-207ENST00000448223 PDCL2Q8N4E4 241 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 CABP2Q9NPB3 220 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 KANK1Q14678 1352 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 SLFN5Q08AF3 891 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 TESK2Q96S53 571 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 CEP89Q96ST8 783 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 DMRT2Q9Y5R5 561 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 ADGRL2O95490 1459 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 ADGBQ8N7X0 1667 aa11.16□□□□□ -0.62
SMC6-207ENST00000448223 NCBP3Q53F19 620 aaKnown RBP11.15□□□□□ -0.62
SMC6-207ENST00000448223 ZNF526Q8TF50 670 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms