RNA–Protein interactions for RNA: ENST00000447271.1

PTPN3-205, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 2

Gene PTPN3, Length 587 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-205ENST00000447271 KDM5AP29375 1690 aaKnown RBP9.21□□□□□ -0.93
PTPN3-205ENST00000447271 PLEKHD1A6NEE1 506 aa9.21□□□□□ -0.94
PTPN3-205ENST00000447271 SEC24BO95487 1268 aa9.21□□□□□ -0.94
PTPN3-205ENST00000447271 FBXO31Q5XUX0 539 aaPredicted RBP9.21□□□□□ -0.94
PTPN3-205ENST00000447271 JMYQ8N9B5 988 aa9.21□□□□□ -0.94
PTPN3-205ENST00000447271 GJD4Q96KN9 370 aaPredicted RBP9.21□□□□□ -0.94
PTPN3-205ENST00000447271 KIAA1210Q9ULL0 1709 aa9.21□□□□□ -0.94
PTPN3-205ENST00000447271 FNBP4Q8N3X1 1017 aaPredicted RBP9.2□□□□□ -0.94
PTPN3-205ENST00000447271 EZH2Q15910 746 aaKnown RBP9.19□□□□□ -0.94
PTPN3-205ENST00000447271 EFCAB2Q5VUJ9 269 aa9.19□□□□□ -0.94
PTPN3-205ENST00000447271 ZNF467Q7Z7K2 595 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-205ENST00000447271 PRDM15P57071 1507 aaPredicted RBP9.19□□□□□ -0.94
PTPN3-205ENST00000447271 RGPD1P0DJD0 1748 aa9.18□□□□□ -0.94
PTPN3-205ENST00000447271 PSEN1P49768 467 aa9.18□□□□□ -0.94
PTPN3-205ENST00000447271 GGT6Q6P531 493 aa9.18□□□□□ -0.94
PTPN3-205ENST00000447271 NRKQ7Z2Y5 1582 aa9.18□□□□□ -0.94
PTPN3-205ENST00000447271 GPBP1L1Q9HC44 474 aaPredicted RBP9.18□□□□□ -0.94
PTPN3-205ENST00000447271 KIDINS220Q9ULH0 1771 aa9.17□□□□□ -0.94
PTPN3-205ENST00000447271 KIF27Q86VH2 1401 aa9.17□□□□□ -0.94
PTPN3-205ENST00000447271 SETD5Q9C0A6 1442 aa9.17□□□□□ -0.94
PTPN3-205ENST00000447271 KCNA6P17658 529 aa9.17□□□□□ -0.94
PTPN3-205ENST00000447271 KLRG1Q96E93 195 aa9.17□□□□□ -0.94
PTPN3-205ENST00000447271 A2MP01023 1474 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 CAMSAP2Q08AD1 1489 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 NLRP1Q9C000 1473 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 PNPLA6Q8IY17 1366 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 PDCD7Q8N8D1 485 aaKnown RBP9.16□□□□□ -0.94
PTPN3-205ENST00000447271 LRRC59Q96AG4 307 aaKnown RBP9.16□□□□□ -0.94
PTPN3-205ENST00000447271 SYT17Q9BSW7 474 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 WDR90Q96KV7 1748 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 MYOM1P52179 1685 aa9.16□□□□□ -0.94
PTPN3-205ENST00000447271 PLCG2P16885 1265 aa9.15□□□□□ -0.94
PTPN3-205ENST00000447271 GPR162Q16538 588 aa9.15□□□□□ -0.94
PTPN3-205ENST00000447271 MAMSTRQ6ZN01 415 aa9.15□□□□□ -0.94
PTPN3-205ENST00000447271 RNF25Q96BH1 459 aaPredicted RBP9.15□□□□□ -0.94
PTPN3-205ENST00000447271 SCUBE2Q9NQ36 999 aa9.15□□□□□ -0.94
PTPN3-205ENST00000447271 MYO5CQ9NQX4 1742 aa9.14□□□□□ -0.95
PTPN3-205ENST00000447271 KRT27Q7Z3Y8 459 aa9.14□□□□□ -0.95
PTPN3-205ENST00000447271 SEPT12Q8IYM1 358 aa9.14□□□□□ -0.95
PTPN3-205ENST00000447271 MPNDQ8N594 471 aa9.14□□□□□ -0.95
PTPN3-205ENST00000447271 ATP10DQ9P241 1426 aa9.14□□□□□ -0.95
PTPN3-205ENST00000447271 GLI3P10071 1580 aa9.13□□□□□ -0.95
PTPN3-205ENST00000447271 PDE4DIPQ5VU43 2346 aa9.13□□□□□ -0.95
PTPN3-205ENST00000447271 FHDC1Q9C0D6 1143 aaPredicted RBP9.13□□□□□ -0.95
PTPN3-205ENST00000447271 MAST1Q9Y2H9 1570 aa9.12□□□□□ -0.95
PTPN3-205ENST00000447271 PDAP1Q13442 181 aaKnown RBP9.12□□□□□ -0.95
PTPN3-205ENST00000447271 BRINP3Q76B58 766 aa9.12□□□□□ -0.95
PTPN3-205ENST00000447271 OCEL1Q9H607 264 aa9.12□□□□□ -0.95
PTPN3-205ENST00000447271 MIA2Q96PC5 1412 aa9.12□□□□□ -0.95
PTPN3-205ENST00000447271 DLC1Q96QB1 1528 aa9.11□□□□□ -0.95
PTPN3-205ENST00000447271 USP19O94966 1318 aa9.11□□□□□ -0.95
PTPN3-205ENST00000447271 HSPA1AP0DMV8 641 aaKnown RBP9.11□□□□□ -0.95
PTPN3-205ENST00000447271 HSPA1BP0DMV9 641 aaKnown RBP9.11□□□□□ -0.95
PTPN3-205ENST00000447271 NBPF8Q3BBV2 869 aa9.11□□□□□ -0.95
PTPN3-205ENST00000447271 NBPF14Q5TI25 921 aa9.11□□□□□ -0.95
PTPN3-205ENST00000447271 DISP2A7MBM2 1401 aa9.11□□□□□ -0.95
PTPN3-205ENST00000447271 NKTRP30414 1462 aaKnown RBP9.1□□□□□ -0.95
PTPN3-205ENST00000447271 DLL1O00548 723 aa9.1□□□□□ -0.95
PTPN3-205ENST00000447271 LTKP29376 864 aa9.1□□□□□ -0.95
PTPN3-205ENST00000447271 TXNDC2Q86VQ3 553 aa9.1□□□□□ -0.95
PTPN3-205ENST00000447271 ZNF526Q8TF50 670 aaPredicted RBP9.1□□□□□ -0.95
PTPN3-205ENST00000447271 TNS1Q9HBL0 1735 aaKnown RBP9.1□□□□□ -0.95
PTPN3-205ENST00000447271 CTTNBP2Q8WZ74 1663 aa9.1□□□□□ -0.95
PTPN3-205ENST00000447271 HTRA3P83110 453 aa9.09□□□□□ -0.95
PTPN3-205ENST00000447271 P3H3Q8IVL6 736 aa9.09□□□□□ -0.95
PTPN3-205ENST00000447271 CAMKK2Q96RR4 588 aa9.09□□□□□ -0.95
PTPN3-205ENST00000447271 NUP188Q5SRE5 1749 aa9.08□□□□□ -0.96
PTPN3-205ENST00000447271 GOLGB1Q14789 3259 aaKnown RBP9.08□□□□□ -0.96
PTPN3-205ENST00000447271 POTEMA6NI47 508 aa9.08□□□□□ -0.96
PTPN3-205ENST00000447271 DPY19L2Q6NUT2 758 aa9.08□□□□□ -0.96
PTPN3-205ENST00000447271 C14orf37Q86TY3 774 aa9.08□□□□□ -0.96
PTPN3-205ENST00000447271 CABP2Q9NPB3 220 aa9.08□□□□□ -0.96
PTPN3-205ENST00000447271 PZPP20742 1482 aa9.08□□□□□ -0.96
PTPN3-205ENST00000447271 PTCH1Q13635 1447 aa9.07□□□□□ -0.96
PTPN3-205ENST00000447271 POTEGQ6S5H5 508 aa9.07□□□□□ -0.96
PTPN3-205ENST00000447271 NUP153P49790 1475 aaKnown RBP9.07□□□□□ -0.96
PTPN3-205ENST00000447271 ARHGAP5Q13017 1502 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 MROH1Q8NDA8 1641 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.06□□□□□ -0.96
PTPN3-205ENST00000447271 ATF3P18847 181 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 HNRNPMP52272 730 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTPN3-205ENST00000447271 CADPS2Q86UW7 1296 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 SLAIN1Q8ND83 568 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 NCOA2Q15596 1464 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 RREB1Q92766 1687 aa9.06□□□□□ -0.96
PTPN3-205ENST00000447271 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.05□□□□□ -0.96
PTPN3-205ENST00000447271 MKRN3Q13064 507 aaKnown RBP9.05□□□□□ -0.96
PTPN3-205ENST00000447271 FAM163AQ96GL9 167 aaPredicted RBP9.05□□□□□ -0.96
PTPN3-205ENST00000447271 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.05□□□□□ -0.96
PTPN3-205ENST00000447271 ASXL1Q8IXJ9 1541 aa9.05□□□□□ -0.96
PTPN3-205ENST00000447271 PITPNM2Q9BZ72 1349 aa9.05□□□□□ -0.96
PTPN3-205ENST00000447271 RGS19P49795 217 aa9.04□□□□□ -0.96
PTPN3-205ENST00000447271 UBR1Q8IWV7 1749 aa9.03□□□□□ -0.96
PTPN3-205ENST00000447271 MARF1Q9Y4F3 1742 aaKnown RBP9.03□□□□□ -0.96
PTPN3-205ENST00000447271 TNRC18O15417 2968 aaPredicted RBP9.03□□□□□ -0.96
PTPN3-205ENST00000447271 PTGER2P43116 358 aa9.03□□□□□ -0.96
PTPN3-205ENST00000447271 DDX17Q92841 729 aaKnown RBP9.03□□□□□ -0.96
PTPN3-205ENST00000447271 SLC26A8Q96RN1 970 aa9.03□□□□□ -0.96
PTPN3-205ENST00000447271 EID1Q9Y6B2 187 aa9.03□□□□□ -0.96
PTPN3-205ENST00000447271 ADGRB2O60241 1585 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms