RNA–Protein interactions for RNA: ENST00000447155.1

HMGB1P16-201, Transcript of high mobility group box 1 pseudogene 16, humanhuman

BASIC

Gene HMGB1P16, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P16-201ENST00000447155 C6orf229H3BNL8 230 aa8.52□□□□□ -1.05
HMGB1P16-201ENST00000447155 APBB1O00213 710 aa8.52□□□□□ -1.05
HMGB1P16-201ENST00000447155 TSR3Q9UJK0 312 aaKnown RBP8.52□□□□□ -1.05
HMGB1P16-201ENST00000447155 HPS5Q9UPZ3 1129 aa8.52□□□□□ -1.05
HMGB1P16-201ENST00000447155 USP17L8P0C7I0 530 aa8.51□□□□□ -1.05
HMGB1P16-201ENST00000447155 BCAMP50895 628 aa8.51□□□□□ -1.05
HMGB1P16-201ENST00000447155 MORN1Q5T089 497 aa8.51□□□□□ -1.05
HMGB1P16-201ENST00000447155 MTMR14Q8NCE2 650 aa8.51□□□□□ -1.05
HMGB1P16-201ENST00000447155 KRTAP3-3Q9BYR6 98 aa8.51□□□□□ -1.05
HMGB1P16-201ENST00000447155 KRTAP3-2Q9BYR7 98 aa8.51□□□□□ -1.05
HMGB1P16-201ENST00000447155 TRAK2O60296 914 aa8.5□□□□□ -1.05
HMGB1P16-201ENST00000447155 Q3C1V9 767 aa8.5□□□□□ -1.05
HMGB1P16-201ENST00000447155 HELBQ8NG08 1087 aaPredicted RBP8.5□□□□□ -1.05
HMGB1P16-201ENST00000447155 COG6Q9Y2V7 657 aa8.5□□□□□ -1.05
HMGB1P16-201ENST00000447155 PUS10Q3MIT2 529 aaKnown RBP8.49□□□□□ -1.05
HMGB1P16-201ENST00000447155 PROSER2Q86WR7 435 aaPredicted RBP8.49□□□□□ -1.05
HMGB1P16-201ENST00000447155 POM121Q96HA1 1249 aa8.49□□□□□ -1.05
HMGB1P16-201ENST00000447155 RETREG3Q86VR2 466 aa8.48□□□□□ -1.05
HMGB1P16-201ENST00000447155 PRM3Q9NNZ6 103 aa8.48□□□□□ -1.05
HMGB1P16-201ENST00000447155 SLC27A5Q9Y2P5 690 aa8.48□□□□□ -1.05
HMGB1P16-201ENST00000447155 CFAP99D6REC4 459 aa8.47□□□□□ -1.05
HMGB1P16-201ENST00000447155 APLP1P51693 650 aa8.47□□□□□ -1.05
HMGB1P16-201ENST00000447155 SYMPKQ92797 1274 aaKnown RBP8.47□□□□□ -1.05
HMGB1P16-201ENST00000447155 CTDSPL2Q05D32 466 aa8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 FNBP4Q8N3X1 1017 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 PRR7Q8TB68 274 aa8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 TSC1Q92574 1164 aa8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 ARXQ96QS3 562 aa8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 SALL2Q9Y467 1007 aaPredicted RBP8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 PCDHB3Q9Y5E6 796 aa8.46□□□□□ -1.06
HMGB1P16-201ENST00000447155 NR1I2O75469 434 aa8.45□□□□□ -1.06
HMGB1P16-201ENST00000447155 THSD4Q6ZMP0 1018 aa8.45□□□□□ -1.06
HMGB1P16-201ENST00000447155 WBP1LQ9NX94 342 aa8.45□□□□□ -1.06
HMGB1P16-201ENST00000447155 DESI1Q6ICB0 168 aa8.44□□□□□ -1.06
HMGB1P16-201ENST00000447155 GDPD2Q9HCC8 539 aa8.44□□□□□ -1.06
HMGB1P16-201ENST00000447155 ARID3CA6NKF2 412 aa8.43□□□□□ -1.06
HMGB1P16-201ENST00000447155 BRICD5Q6PL45 260 aa8.43□□□□□ -1.06
HMGB1P16-201ENST00000447155 WWC1Q8IX03 1113 aa8.43□□□□□ -1.06
HMGB1P16-201ENST00000447155 SCUBE3Q8IX30 993 aa8.43□□□□□ -1.06
HMGB1P16-201ENST00000447155 GJD4Q96KN9 370 aaPredicted RBP8.43□□□□□ -1.06
HMGB1P16-201ENST00000447155 C1orf115Q9H7X2 142 aa8.43□□□□□ -1.06
HMGB1P16-201ENST00000447155 FMNL1O95466 1100 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 BLOC1S3Q6QNY0 202 aa8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 NYAP1Q6ZVC0 841 aa8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 KCTD12Q96CX2 325 aaKnown RBP8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 USB1Q9BQ65 265 aaKnown RBP8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 HMX1Q9NP08 348 aaPredicted RBP8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 TBC1D2BQ9UPU7 963 aa8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 NDUFB9Q9Y6M9 179 aa8.42□□□□□ -1.06
HMGB1P16-201ENST00000447155 POTEGQ6S5H5 508 aa8.41□□□□□ -1.06
HMGB1P16-201ENST00000447155 RNF19BQ6ZMZ0 732 aa8.41□□□□□ -1.06
HMGB1P16-201ENST00000447155 CDAN1Q8IWY9 1227 aa8.41□□□□□ -1.06
HMGB1P16-201ENST00000447155 LRRN4Q8WUT4 740 aa8.41□□□□□ -1.06
HMGB1P16-201ENST00000447155 ABL2P42684 1182 aa8.4□□□□□ -1.06
HMGB1P16-201ENST00000447155 THAP11Q96EK4 314 aa8.4□□□□□ -1.06
HMGB1P16-201ENST00000447155 TRIM34Q9BYJ4 488 aa8.4□□□□□ -1.06
HMGB1P16-201ENST00000447155 ZNF330Q9Y3S2 320 aaPredicted RBP8.4□□□□□ -1.06
HMGB1P16-201ENST00000447155 POTEMA6NI47 508 aa8.39□□□□□ -1.07
HMGB1P16-201ENST00000447155 ZNF777Q9ULD5 760 aaPredicted RBP8.39□□□□□ -1.07
HMGB1P16-201ENST00000447155 LYPD8Q6UX82 237 aa8.38□□□□□ -1.07
HMGB1P16-201ENST00000447155 HOMEZQ8IX15 550 aa8.38□□□□□ -1.07
HMGB1P16-201ENST00000447155 PER1O15534 1290 aaPredicted RBP8.37□□□□□ -1.07
HMGB1P16-201ENST00000447155 JUNDP17535 347 aa8.36□□□□□ -1.07
HMGB1P16-201ENST00000447155 COPS2P61201 443 aa8.36□□□□□ -1.07
HMGB1P16-201ENST00000447155 MSS51Q4VC12 460 aa8.36□□□□□ -1.07
HMGB1P16-201ENST00000447155 IRF5Q13568 498 aa8.35□□□□□ -1.07
HMGB1P16-201ENST00000447155 NR6A1Q15406 480 aa8.35□□□□□ -1.07
HMGB1P16-201ENST00000447155 WASHC4Q2M389 1173 aa8.35□□□□□ -1.07
HMGB1P16-201ENST00000447155 CCDC82Q8N4S0 544 aa8.35□□□□□ -1.07
HMGB1P16-201ENST00000447155 EPS8L1Q8TE68 723 aa8.35□□□□□ -1.07
HMGB1P16-201ENST00000447155 ARID3AQ99856 593 aa8.35□□□□□ -1.07
HMGB1P16-201ENST00000447155 GPR37L1O60883 481 aa8.34□□□□□ -1.07
HMGB1P16-201ENST00000447155 PTPRNQ16849 979 aa8.34□□□□□ -1.07
HMGB1P16-201ENST00000447155 PNMA1Q8ND90 353 aa8.34□□□□□ -1.07
HMGB1P16-201ENST00000447155 SPSB2Q99619 263 aa8.34□□□□□ -1.07
HMGB1P16-201ENST00000447155 ZPR1O75312 459 aa8.33□□□□□ -1.08
HMGB1P16-201ENST00000447155 PTPN5P54829 565 aa8.33□□□□□ -1.08
HMGB1P16-201ENST00000447155 CCDC97Q96F63 343 aaPredicted RBP8.33□□□□□ -1.08
HMGB1P16-201ENST00000447155 MTRQ99707 1265 aa8.33□□□□□ -1.08
HMGB1P16-201ENST00000447155 SERPINA10Q9UK55 444 aa8.33□□□□□ -1.08
HMGB1P16-201ENST00000447155 DXOO77932 396 aaKnown RBP8.32□□□□□ -1.08
HMGB1P16-201ENST00000447155 FAM160A2Q8N612 972 aaPredicted RBP8.32□□□□□ -1.08
HMGB1P16-201ENST00000447155 MYT1LQ9UL68 1186 aa8.32□□□□□ -1.08
HMGB1P16-201ENST00000447155 ADH1BP00325 375 aa8.31□□□□□ -1.08
HMGB1P16-201ENST00000447155 F12P00748 615 aaPredicted RBP8.31□□□□□ -1.08
HMGB1P16-201ENST00000447155 MMP16P51512 607 aa8.31□□□□□ -1.08
HMGB1P16-201ENST00000447155 POM121CA8CG34 1229 aa8.3□□□□□ -1.08
HMGB1P16-201ENST00000447155 TJAP1Q5JTD0 557 aa8.3□□□□□ -1.08
HMGB1P16-201ENST00000447155 CALR3Q96L12 384 aaKnown RBP8.3□□□□□ -1.08
HMGB1P16-201ENST00000447155 IL21Q9HBE4 155 aa8.3□□□□□ -1.08
HMGB1P16-201ENST00000447155 TLL1O43897 1013 aa8.29□□□□□ -1.08
HMGB1P16-201ENST00000447155 CCNYL3P0C7X3 344 aa8.29□□□□□ -1.08
HMGB1P16-201ENST00000447155 ZC3H4Q9UPT8 1303 aaKnown RBP8.29□□□□□ -1.08
HMGB1P16-201ENST00000447155 VAC14Q08AM6 782 aa8.28□□□□□ -1.08
HMGB1P16-201ENST00000447155 GLMNQ92990 594 aa8.28□□□□□ -1.08
HMGB1P16-201ENST00000447155 NUDT12Q9BQG2 462 aa8.28□□□□□ -1.08
HMGB1P16-201ENST00000447155 PRDM9Q9NQV7 894 aa8.28□□□□□ -1.08
HMGB1P16-201ENST00000447155 MAP10Q9P2G4 905 aa8.28□□□□□ -1.08
HMGB1P16-201ENST00000447155 FKBPLQ9UIM3 349 aa8.28□□□□□ -1.08
HMGB1P16-201ENST00000447155 CTHP32929 405 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms