RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 LRPPRCP42704 1394 aaKnown RBP17.8■□□□□ 0.44
DDX56-206ENST00000446987 TMEM132EQ6IEE7 984 aa17.8■□□□□ 0.44
DDX56-206ENST00000446987 ARHGEF28Q8N1W1 1705 aaKnown RBP17.79■□□□□ 0.44
DDX56-206ENST00000446987 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.79■□□□□ 0.44
DDX56-206ENST00000446987 ABCC11Q96J66 1382 aa17.77■□□□□ 0.44
DDX56-206ENST00000446987 DLC1Q96QB1 1528 aa17.77■□□□□ 0.43
DDX56-206ENST00000446987 TONSLQ96HA7 1378 aa17.76■□□□□ 0.43
DDX56-206ENST00000446987 PROSER2Q86WR7 435 aaPredicted RBP17.76■□□□□ 0.43
DDX56-206ENST00000446987 NCOA3Q9Y6Q9 1424 aa17.76■□□□□ 0.43
DDX56-206ENST00000446987 NBPF8Q3BBV2 869 aa17.75■□□□□ 0.43
DDX56-206ENST00000446987 PLEKHH1Q9ULM0 1364 aa17.74■□□□□ 0.43
DDX56-206ENST00000446987 ADGRL3Q9HAR2 1447 aa17.74■□□□□ 0.43
DDX56-206ENST00000446987 C11orf95C9JLR9 678 aaPredicted RBP17.73■□□□□ 0.43
DDX56-206ENST00000446987 NBPF1Q3BBV0 1214 aa17.73■□□□□ 0.43
DDX56-206ENST00000446987 FAM135BQ49AJ0 1406 aa17.72■□□□□ 0.43
DDX56-206ENST00000446987 RALGAPBQ86X10 1494 aa17.72■□□□□ 0.43
DDX56-206ENST00000446987 STK26Q9P289 416 aa17.71■□□□□ 0.43
DDX56-206ENST00000446987 CDC42BPGQ6DT37 1551 aa17.7■□□□□ 0.42
DDX56-206ENST00000446987 RTL5Q5HYW3 569 aaPredicted RBP17.7■□□□□ 0.42
DDX56-206ENST00000446987 DCCP43146 1447 aa17.7■□□□□ 0.42
DDX56-206ENST00000446987 PPP4R2Q9NY27 417 aa17.69■□□□□ 0.42
DDX56-206ENST00000446987 ADGRB2O60241 1585 aa17.69■□□□□ 0.42
DDX56-206ENST00000446987 MSH6P52701 1360 aa17.69■□□□□ 0.42
DDX56-206ENST00000446987 GPRASP1Q5JY77 1395 aa17.69■□□□□ 0.42
DDX56-206ENST00000446987 FBXO41Q8TF61 875 aa17.69■□□□□ 0.42
DDX56-206ENST00000446987 WAPLQ7Z5K2 1190 aa17.68■□□□□ 0.42
DDX56-206ENST00000446987 FMN2Q9NZ56 1722 aa17.66■□□□□ 0.42
DDX56-206ENST00000446987 UBAP1LF5GYI3 381 aa17.66■□□□□ 0.42
DDX56-206ENST00000446987 SIRT1Q96EB6 747 aa17.66■□□□□ 0.42
DDX56-206ENST00000446987 MST1RQ04912 1400 aa17.66■□□□□ 0.42
DDX56-206ENST00000446987 ROBO1Q9Y6N7 1651 aa17.66■□□□□ 0.42
DDX56-206ENST00000446987 WASHC2AQ641Q2 1341 aa17.65■□□□□ 0.42
DDX56-206ENST00000446987 TRAK1Q9UPV9 953 aa17.65■□□□□ 0.42
DDX56-206ENST00000446987 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
DDX56-206ENST00000446987 C19orf44Q9H6X5 657 aa17.64■□□□□ 0.41
DDX56-206ENST00000446987 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
DDX56-206ENST00000446987 PRAM1Q96QH2 718 aa17.63■□□□□ 0.41
DDX56-206ENST00000446987 USP35Q9P2H5 1018 aa17.63■□□□□ 0.41
DDX56-206ENST00000446987 ROCK2O75116 1388 aaKnown RBP17.63■□□□□ 0.41
DDX56-206ENST00000446987 EIF5BO60841 1220 aaKnown RBP17.63■□□□□ 0.41
DDX56-206ENST00000446987 ILDR1Q86SU0 546 aaPredicted RBP17.63■□□□□ 0.41
DDX56-206ENST00000446987 TIMELESSQ9UNS1 1208 aa17.63■□□□□ 0.41
DDX56-206ENST00000446987 USP32Q8NFA0 1604 aa17.62■□□□□ 0.41
DDX56-206ENST00000446987 TOM1O60784 492 aa17.61■□□□□ 0.41
DDX56-206ENST00000446987 C14orf37Q86TY3 774 aa17.61■□□□□ 0.41
DDX56-206ENST00000446987 IL27Q8NEV9 243 aa17.61■□□□□ 0.41
DDX56-206ENST00000446987 RGPD8O14715 1765 aaPredicted RBP17.6■□□□□ 0.41
DDX56-206ENST00000446987 ANP32CO43423 234 aa17.59■□□□□ 0.41
DDX56-206ENST00000446987 C1orf167Q5SNV9 1468 aa17.59■□□□□ 0.41
DDX56-206ENST00000446987 SAFB2Q14151 953 aaKnown RBP eCLIP17.58■□□□□ 0.41
DDX56-206ENST00000446987 NBR1Q14596 966 aa17.58■□□□□ 0.4
DDX56-206ENST00000446987 CADPS2Q86UW7 1296 aa17.58■□□□□ 0.4
DDX56-206ENST00000446987 NHSL1Q5SYE7 1610 aa17.57■□□□□ 0.4
DDX56-206ENST00000446987 PIP4K2BP78356 416 aa17.57■□□□□ 0.4
DDX56-206ENST00000446987 IPO9Q96P70 1041 aaKnown RBP17.57■□□□□ 0.4
DDX56-206ENST00000446987 TULP4Q9NRJ4 1543 aa17.57■□□□□ 0.4
DDX56-206ENST00000446987 PKNOX2Q96KN3 472 aa17.56■□□□□ 0.4
DDX56-206ENST00000446987 SLAIN2Q9P270 581 aa17.56■□□□□ 0.4
DDX56-206ENST00000446987 ATF3P18847 181 aa17.56■□□□□ 0.4
DDX56-206ENST00000446987 AHDC1Q5TGY3 1603 aaPredicted RBP17.55■□□□□ 0.4
DDX56-206ENST00000446987 POGKQ9P215 609 aa17.54■□□□□ 0.4
DDX56-206ENST00000446987 MINK1Q8N4C8 1332 aaPredicted RBP17.54■□□□□ 0.4
DDX56-206ENST00000446987 TOPAZ1Q8N9V7 1692 aa17.54■□□□□ 0.4
DDX56-206ENST00000446987 COL16A1Q07092 1604 aaPredicted RBP17.54■□□□□ 0.4
DDX56-206ENST00000446987 PAK3O75914 559 aaPredicted RBP17.54■□□□□ 0.4
DDX56-206ENST00000446987 BRINP3Q76B58 766 aa17.53■□□□□ 0.4
DDX56-206ENST00000446987 HIRIP3Q9BW71 556 aaPredicted RBP17.53■□□□□ 0.4
DDX56-206ENST00000446987 CENPJQ9HC77 1338 aaPredicted RBP17.53■□□□□ 0.4
DDX56-206ENST00000446987 DDX10Q13206 875 aaKnown RBP17.52■□□□□ 0.4
DDX56-206ENST00000446987 CARD11Q9BXL7 1154 aa17.52■□□□□ 0.4
DDX56-206ENST00000446987 ATP7BP35670 1465 aa17.52■□□□□ 0.4
DDX56-206ENST00000446987 PHLPP1O60346 1717 aa17.52■□□□□ 0.4
DDX56-206ENST00000446987 ANP32AP39687 249 aaKnown RBP17.52■□□□□ 0.39
DDX56-206ENST00000446987 PRR36Q9H6K5 1346 aa17.51■□□□□ 0.39
DDX56-206ENST00000446987 KIF1AQ12756 1690 aa17.5■□□□□ 0.39
DDX56-206ENST00000446987 ANKARQ7Z5J8 1434 aa17.5■□□□□ 0.39
DDX56-206ENST00000446987 SBNO2Q9Y2G9 1366 aa17.5■□□□□ 0.39
DDX56-206ENST00000446987 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
DDX56-206ENST00000446987 ITSN1Q15811 1721 aa17.49■□□□□ 0.39
DDX56-206ENST00000446987 HSPA1LP34931 641 aa17.49■□□□□ 0.39
DDX56-206ENST00000446987 ORAI2Q96SN7 254 aa17.49■□□□□ 0.39
DDX56-206ENST00000446987 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
DDX56-206ENST00000446987 ZBTB47Q9UFB7 747 aaPredicted RBP17.49■□□□□ 0.39
DDX56-206ENST00000446987 NUTM2FA1L443 756 aa17.48■□□□□ 0.39
DDX56-206ENST00000446987 RSPH6AQ9H0K4 717 aa17.48■□□□□ 0.39
DDX56-206ENST00000446987 WASLO00401 505 aaPredicted RBP17.48■□□□□ 0.39
DDX56-206ENST00000446987 USP47Q96K76 1375 aa17.47■□□□□ 0.39
DDX56-206ENST00000446987 PXDNQ92626 1479 aa17.45■□□□□ 0.38
DDX56-206ENST00000446987 DDX17Q92841 729 aaKnown RBP17.45■□□□□ 0.38
DDX56-206ENST00000446987 TESK2Q96S53 571 aa17.44■□□□□ 0.38
DDX56-206ENST00000446987 GLIPR1L2Q4G1C9 344 aa17.43■□□□□ 0.38
DDX56-206ENST00000446987 CDK19Q9BWU1 502 aa17.43■□□□□ 0.38
DDX56-206ENST00000446987 TRPM3Q9HCF6 1732 aaPredicted RBP17.43■□□□□ 0.38
DDX56-206ENST00000446987 ST20-MTHFSA0A0A6YYL1 179 aa17.41■□□□□ 0.38
DDX56-206ENST00000446987 SHPRHQ149N8 1683 aa17.41■□□□□ 0.38
DDX56-206ENST00000446987 ESCO1Q5FWF5 840 aa17.41■□□□□ 0.38
DDX56-206ENST00000446987 NUDT16Q96DE0 195 aaKnown RBP17.39■□□□□ 0.37
DDX56-206ENST00000446987 RTN4Q9NQC3 1192 aaKnown RBP17.39■□□□□ 0.37
DDX56-206ENST00000446987 SOS2Q07890 1332 aaPredicted RBP17.39■□□□□ 0.37
DDX56-206ENST00000446987 PPM1GO15355 546 aaPredicted RBP17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 61.8 ms