RNA–Protein interactions for RNA: ENST00000446852.5

SMC6-206, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 1 (best)

Gene SMC6, Length 2,460 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-206ENST00000446852 ANKRD36BQ8N2N9 1353 aa23.34■■□□□ 1.33
SMC6-206ENST00000446852 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.33
SMC6-206ENST00000446852 POGKQ9P215 609 aa23.32■■□□□ 1.32
SMC6-206ENST00000446852 WDR43Q15061 677 aaKnown RBP eCLIP23.31■■□□□ 1.32
SMC6-206ENST00000446852 C3P01024 1663 aa23.3■■□□□ 1.32
SMC6-206ENST00000446852 PELP1Q8IZL8 1130 aaKnown RBP23.3■■□□□ 1.32
SMC6-206ENST00000446852 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
SMC6-206ENST00000446852 FER1L4A9Z1Z3 1794 aa23.29■■□□□ 1.32
SMC6-206ENST00000446852 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMC6-206ENST00000446852 RNF123Q5XPI4 1314 aa23.28■■□□□ 1.32
SMC6-206ENST00000446852 NINLQ9Y2I6 1382 aa23.28■■□□□ 1.32
SMC6-206ENST00000446852 ERICH6BQ5W0A0 696 aa23.27■■□□□ 1.32
SMC6-206ENST00000446852 CGNL1Q0VF96 1302 aa23.27■■□□□ 1.32
SMC6-206ENST00000446852 A0A1W2PP64 1363 aa23.27■■□□□ 1.32
SMC6-206ENST00000446852 TRHP20396 242 aaPredicted RBP23.26■■□□□ 1.31
SMC6-206ENST00000446852 PDE3BQ13370 1112 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 METP08581 1390 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 ATAD2Q6PL18 1390 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 SHPRHQ149N8 1683 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 MORC1Q86VD1 984 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 TMEM2Q9UHN6 1383 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 PLEKHH1Q9ULM0 1364 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 KNDC1Q76NI1 1749 aa23.26■■□□□ 1.31
SMC6-206ENST00000446852 ABCC11Q96J66 1382 aa23.25■■□□□ 1.31
SMC6-206ENST00000446852 CD163L1Q9NR16 1453 aa23.25■■□□□ 1.31
SMC6-206ENST00000446852 CEBPAP49715 358 aaPredicted RBP23.24■■□□□ 1.31
SMC6-206ENST00000446852 CDCA7LQ96GN5 454 aa23.24■■□□□ 1.31
SMC6-206ENST00000446852 WAPLQ7Z5K2 1190 aa23.24■■□□□ 1.31
SMC6-206ENST00000446852 POLR3AO14802 1390 aaPredicted RBP23.23■■□□□ 1.31
SMC6-206ENST00000446852 NLRP1Q9C000 1473 aa23.23■■□□□ 1.31
SMC6-206ENST00000446852 TNNT2P45379 298 aaPredicted RBP23.22■■□□□ 1.31
SMC6-206ENST00000446852 NSD2O96028 1365 aa23.22■■□□□ 1.31
SMC6-206ENST00000446852 CDK19Q9BWU1 502 aa23.22■■□□□ 1.31
SMC6-206ENST00000446852 ANKRD26Q9UPS8 1709 aa23.22■■□□□ 1.31
SMC6-206ENST00000446852 HDGFP51858 240 aaKnown RBP23.2■■□□□ 1.3
SMC6-206ENST00000446852 PPP4R2Q9NY27 417 aa23.19■■□□□ 1.3
SMC6-206ENST00000446852 CPS1P31327 1500 aa23.18■■□□□ 1.3
SMC6-206ENST00000446852 TECPR2O15040 1411 aa23.18■■□□□ 1.3
SMC6-206ENST00000446852 CCDC146Q8IYE0 955 aa23.17■■□□□ 1.3
SMC6-206ENST00000446852 ADAMTS13Q76LX8 1427 aa23.17■■□□□ 1.3
SMC6-206ENST00000446852 KIF20BQ96Q89 1820 aa23.16■■□□□ 1.3
SMC6-206ENST00000446852 TERF2IPQ9NYB0 399 aa23.16■■□□□ 1.3
SMC6-206ENST00000446852 ZNF521Q96K83 1311 aa23.15■■□□□ 1.3
SMC6-206ENST00000446852 TXNDC2Q86VQ3 553 aa23.15■■□□□ 1.3
SMC6-206ENST00000446852 LTKP29376 864 aa23.14■■□□□ 1.29
SMC6-206ENST00000446852 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.29
SMC6-206ENST00000446852 FAM135BQ49AJ0 1406 aa23.14■■□□□ 1.29
SMC6-206ENST00000446852 MTHFSP49914 203 aa23.13■■□□□ 1.29
SMC6-206ENST00000446852 CABP1Q9NZU7 370 aa23.13■■□□□ 1.29
SMC6-206ENST00000446852 PLEKHG1Q9ULL1 1385 aa23.12■■□□□ 1.29
SMC6-206ENST00000446852 TSHZ2Q9NRE2 1034 aa23.12■■□□□ 1.29
SMC6-206ENST00000446852 PLPPR3Q6T4P5 718 aa23.11■■□□□ 1.29
SMC6-206ENST00000446852 SLIT1O75093 1534 aa23.11■■□□□ 1.29
SMC6-206ENST00000446852 MED14O60244 1454 aa23.11■■□□□ 1.29
SMC6-206ENST00000446852 ATP7BP35670 1465 aa23.11■■□□□ 1.29
SMC6-206ENST00000446852 APAF1O14727 1248 aa23.1■■□□□ 1.29
SMC6-206ENST00000446852 GGNBP2Q9H3C7 697 aa23.1■■□□□ 1.29
SMC6-206ENST00000446852 ARHGAP23Q9P227 1491 aa23.1■■□□□ 1.29
SMC6-206ENST00000446852 FYB1O15117 783 aa23.09■■□□□ 1.29
SMC6-206ENST00000446852 RRP1P56182 461 aaKnown RBP23.09■■□□□ 1.29
SMC6-206ENST00000446852 HDGFL2Q7Z4V5 671 aaPredicted RBP23.09■■□□□ 1.29
SMC6-206ENST00000446852 SIRT1Q96EB6 747 aa23.09■■□□□ 1.29
SMC6-206ENST00000446852 WASLO00401 505 aaPredicted RBP23.08■■□□□ 1.29
SMC6-206ENST00000446852 B4GALNT3Q6L9W6 998 aa23.08■■□□□ 1.29
SMC6-206ENST00000446852 ROBO2Q9HCK4 1378 aa23.08■■□□□ 1.28
SMC6-206ENST00000446852 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.06■■□□□ 1.28
SMC6-206ENST00000446852 GOLGA2Q08379 1002 aa23.05■■□□□ 1.28
SMC6-206ENST00000446852 DUSP27Q5VZP5 1158 aa23.05■■□□□ 1.28
SMC6-206ENST00000446852 CFAP53Q96M91 514 aa23.05■■□□□ 1.28
SMC6-206ENST00000446852 PPIP5K1Q6PFW1 1433 aa23.05■■□□□ 1.28
SMC6-206ENST00000446852 RIMS1Q86UR5 1692 aaKnown RBP23.05■■□□□ 1.28
SMC6-206ENST00000446852 ADGRB2O60241 1585 aa23.04■■□□□ 1.28
SMC6-206ENST00000446852 IQSEC2Q5JU85 1478 aa23.03■■□□□ 1.28
SMC6-206ENST00000446852 MON2Q7Z3U7 1717 aa23.03■■□□□ 1.28
SMC6-206ENST00000446852 CPSF1Q10570 1443 aaKnown RBP23.03■■□□□ 1.28
SMC6-206ENST00000446852 EID1Q9Y6B2 187 aa23.03■■□□□ 1.28
SMC6-206ENST00000446852 COL3A1P02461 1466 aaPredicted RBP23.03■■□□□ 1.28
SMC6-206ENST00000446852 AKAP12Q02952 1782 aa23.02■■□□□ 1.28
SMC6-206ENST00000446852 PTPRUQ92729 1446 aa23.02■■□□□ 1.28
SMC6-206ENST00000446852 CDC42BPGQ6DT37 1551 aa23.02■■□□□ 1.28
SMC6-206ENST00000446852 SLC26A8Q96RN1 970 aa23.02■■□□□ 1.28
SMC6-206ENST00000446852 ITSN1Q15811 1721 aa23.01■■□□□ 1.27
SMC6-206ENST00000446852 SLFN5Q08AF3 891 aa23.01■■□□□ 1.27
SMC6-206ENST00000446852 NUDT16Q96DE0 195 aaKnown RBP23■■□□□ 1.27
SMC6-206ENST00000446852 SPINK5Q9NQ38 1064 aaPredicted RBP23■■□□□ 1.27
SMC6-206ENST00000446852 NCKAP5LQ9HCH0 1330 aa23■■□□□ 1.27
SMC6-206ENST00000446852 TRMT2AQ8IZ69 625 aaKnown RBP22.99■■□□□ 1.27
SMC6-206ENST00000446852 CEP170BQ9Y4F5 1589 aaPredicted RBP22.99■■□□□ 1.27
SMC6-206ENST00000446852 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.99■■□□□ 1.27
SMC6-206ENST00000446852 NGEFQ8N5V2 710 aa22.99■■□□□ 1.27
SMC6-206ENST00000446852 RUNDC1Q96C34 613 aa22.99■■□□□ 1.27
SMC6-206ENST00000446852 DMRT2Q9Y5R5 561 aa22.98■■□□□ 1.27
SMC6-206ENST00000446852 TOPAZ1Q8N9V7 1692 aa22.98■■□□□ 1.27
SMC6-206ENST00000446852 THEMISQ8N1K5 641 aaPredicted RBP22.98■■□□□ 1.27
SMC6-206ENST00000446852 EDC4Q6P2E9 1401 aaKnown RBP22.97■■□□□ 1.27
SMC6-206ENST00000446852 PRR36Q9H6K5 1346 aa22.97■■□□□ 1.27
SMC6-206ENST00000446852 MAP2P11137 1827 aaKnown RBP22.97■■□□□ 1.27
SMC6-206ENST00000446852 DIP2AQ14689 1571 aa22.96■■□□□ 1.27
SMC6-206ENST00000446852 CCDC61Q9Y6R9 512 aa22.96■■□□□ 1.27
SMC6-206ENST00000446852 PLIN1O60240 522 aa22.94■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms