RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.69□□□□□ -0.38
COL6A4P1-201ENST00000446690 ALKQ9UM73 1620 aa12.68□□□□□ -0.38
COL6A4P1-201ENST00000446690 HDGFP51858 240 aaKnown RBP12.68□□□□□ -0.38
COL6A4P1-201ENST00000446690 PUS7Q96PZ0 661 aaKnown RBP12.68□□□□□ -0.38
COL6A4P1-201ENST00000446690 ARHGEF28Q8N1W1 1705 aaKnown RBP12.67□□□□□ -0.38
COL6A4P1-201ENST00000446690 TULP4Q9NRJ4 1543 aa12.67□□□□□ -0.38
COL6A4P1-201ENST00000446690 CGNL1Q0VF96 1302 aa12.67□□□□□ -0.38
COL6A4P1-201ENST00000446690 CDCA7LQ96GN5 454 aa12.67□□□□□ -0.38
COL6A4P1-201ENST00000446690 CDK19Q9BWU1 502 aa12.67□□□□□ -0.38
COL6A4P1-201ENST00000446690 PTPRMP28827 1452 aa12.67□□□□□ -0.38
COL6A4P1-201ENST00000446690 CCDC146Q8IYE0 955 aa12.66□□□□□ -0.38
COL6A4P1-201ENST00000446690 TXNDC2Q86VQ3 553 aa12.65□□□□□ -0.38
COL6A4P1-201ENST00000446690 BLMP54132 1417 aaPredicted RBP12.65□□□□□ -0.38
COL6A4P1-201ENST00000446690 ANKRD36BQ8N2N9 1353 aa12.65□□□□□ -0.38
COL6A4P1-201ENST00000446690 PDE3BQ13370 1112 aa12.65□□□□□ -0.39
COL6A4P1-201ENST00000446690 METP08581 1390 aa12.63□□□□□ -0.39
COL6A4P1-201ENST00000446690 PLEKHH1Q9ULM0 1364 aa12.63□□□□□ -0.39
COL6A4P1-201ENST00000446690 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
COL6A4P1-201ENST00000446690 CABP1Q9NZU7 370 aa12.63□□□□□ -0.39
COL6A4P1-201ENST00000446690 INSRP06213 1382 aa12.63□□□□□ -0.39
COL6A4P1-201ENST00000446690 ERICH6BQ5W0A0 696 aa12.62□□□□□ -0.39
COL6A4P1-201ENST00000446690 PPP4R2Q9NY27 417 aa12.62□□□□□ -0.39
COL6A4P1-201ENST00000446690 ATAD2Q6PL18 1390 aa12.62□□□□□ -0.39
COL6A4P1-201ENST00000446690 MTHFSP49914 203 aa12.62□□□□□ -0.39
COL6A4P1-201ENST00000446690 A0A1W2PP64 1363 aa12.62□□□□□ -0.39
COL6A4P1-201ENST00000446690 TMEM2Q9UHN6 1383 aa12.62□□□□□ -0.39
COL6A4P1-201ENST00000446690 GGNBP2Q9H3C7 697 aa12.61□□□□□ -0.39
COL6A4P1-201ENST00000446690 HDGFL2Q7Z4V5 671 aaPredicted RBP12.61□□□□□ -0.39
COL6A4P1-201ENST00000446690 RCAN3Q9UKA8 241 aa12.61□□□□□ -0.39
COL6A4P1-201ENST00000446690 APAF1O14727 1248 aa12.6□□□□□ -0.39
COL6A4P1-201ENST00000446690 LTKP29376 864 aa12.6□□□□□ -0.39
COL6A4P1-201ENST00000446690 ABCC11Q96J66 1382 aa12.6□□□□□ -0.39
COL6A4P1-201ENST00000446690 B4GALNT3Q6L9W6 998 aa12.6□□□□□ -0.39
COL6A4P1-201ENST00000446690 NINLQ9Y2I6 1382 aa12.6□□□□□ -0.39
COL6A4P1-201ENST00000446690 EID1Q9Y6B2 187 aa12.59□□□□□ -0.39
COL6A4P1-201ENST00000446690 CFAP53Q96M91 514 aa12.59□□□□□ -0.39
COL6A4P1-201ENST00000446690 SLC26A8Q96RN1 970 aa12.59□□□□□ -0.39
COL6A4P1-201ENST00000446690 POLR3AO14802 1390 aaPredicted RBP12.58□□□□□ -0.4
COL6A4P1-201ENST00000446690 RNF123Q5XPI4 1314 aa12.57□□□□□ -0.4
COL6A4P1-201ENST00000446690 WASLO00401 505 aaPredicted RBP12.57□□□□□ -0.4
COL6A4P1-201ENST00000446690 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
COL6A4P1-201ENST00000446690 FYB1O15117 783 aa12.57□□□□□ -0.4
COL6A4P1-201ENST00000446690 ANP32EQ9BTT0 268 aa12.57□□□□□ -0.4
COL6A4P1-201ENST00000446690 NSD2O96028 1365 aa12.57□□□□□ -0.4
COL6A4P1-201ENST00000446690 GOLGA2Q08379 1002 aa12.56□□□□□ -0.4
COL6A4P1-201ENST00000446690 RRP1P56182 461 aaKnown RBP12.56□□□□□ -0.4
COL6A4P1-201ENST00000446690 NEUROD2Q15784 382 aa12.56□□□□□ -0.4
COL6A4P1-201ENST00000446690 TSHZ2Q9NRE2 1034 aa12.56□□□□□ -0.4
COL6A4P1-201ENST00000446690 DLC1Q96QB1 1528 aa12.55□□□□□ -0.4
COL6A4P1-201ENST00000446690 NLRP1Q9C000 1473 aa12.55□□□□□ -0.4
COL6A4P1-201ENST00000446690 NRXN3Q9Y4C0 1643 aa12.55□□□□□ -0.4
COL6A4P1-201ENST00000446690 NCKAP5LQ9HCH0 1330 aa12.55□□□□□ -0.4
COL6A4P1-201ENST00000446690 UBR1Q8IWV7 1749 aa12.55□□□□□ -0.4
COL6A4P1-201ENST00000446690 THEMISQ8N1K5 641 aaPredicted RBP12.54□□□□□ -0.4
COL6A4P1-201ENST00000446690 NUDT16Q96DE0 195 aaKnown RBP12.54□□□□□ -0.4
COL6A4P1-201ENST00000446690 CD163L1Q9NR16 1453 aa12.54□□□□□ -0.4
COL6A4P1-201ENST00000446690 NUTM2FA1L443 756 aa12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 PLIN1O60240 522 aa12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 U2AF1L5P0DN76 240 aaPredicted RBP12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 U2AF1Q01081 240 aaKnown RBP eCLIP12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 BCL11AQ9H165 835 aa12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 RRP7AQ9Y3A4 280 aaKnown RBP12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 SETD1AO15047 1707 aaKnown RBP12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 USP32Q8NFA0 1604 aa12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 DUSP27Q5VZP5 1158 aa12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 SIRT1Q96EB6 747 aa12.53□□□□□ -0.4
COL6A4P1-201ENST00000446690 PLEKHG1Q9ULL1 1385 aa12.52□□□□□ -0.4
COL6A4P1-201ENST00000446690 ZNF521Q96K83 1311 aa12.52□□□□□ -0.4
COL6A4P1-201ENST00000446690 ADAMTS13Q76LX8 1427 aa12.52□□□□□ -0.4
COL6A4P1-201ENST00000446690 U2SURPO15042 1029 aaKnown RBP12.52□□□□□ -0.41
COL6A4P1-201ENST00000446690 PPM1GO15355 546 aaPredicted RBP12.52□□□□□ -0.41
COL6A4P1-201ENST00000446690 RUNDC1Q96C34 613 aa12.52□□□□□ -0.41
COL6A4P1-201ENST00000446690 CCDC136Q96JN2 1154 aa12.52□□□□□ -0.41
COL6A4P1-201ENST00000446690 ROBO2Q9HCK4 1378 aa12.52□□□□□ -0.41
COL6A4P1-201ENST00000446690 FBLN1P23142 703 aa12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 CCDC61Q9Y6R9 512 aa12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 PPIP5K1Q6PFW1 1433 aa12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 C3P01024 1663 aa12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 SLFN5Q08AF3 891 aa12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 SPINK5Q9NQ38 1064 aaPredicted RBP12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 FAM135BQ49AJ0 1406 aa12.51□□□□□ -0.41
COL6A4P1-201ENST00000446690 TCP11L2Q8N4U5 519 aa12.5□□□□□ -0.41
COL6A4P1-201ENST00000446690 AMOTL2Q9Y2J4 779 aa12.5□□□□□ -0.41
COL6A4P1-201ENST00000446690 EXOC6Q8TAG9 804 aa12.5□□□□□ -0.41
COL6A4P1-201ENST00000446690 FER1L4A9Z1Z3 1794 aa12.49□□□□□ -0.41
COL6A4P1-201ENST00000446690 TECPR2O15040 1411 aa12.49□□□□□ -0.41
COL6A4P1-201ENST00000446690 WWC1Q8IX03 1113 aa12.49□□□□□ -0.41
COL6A4P1-201ENST00000446690 DMRT2Q9Y5R5 561 aa12.49□□□□□ -0.41
COL6A4P1-201ENST00000446690 NME9Q86XW9 330 aa12.48□□□□□ -0.41
COL6A4P1-201ENST00000446690 E9PSI1 815 aa12.48□□□□□ -0.41
COL6A4P1-201ENST00000446690 NGEFQ8N5V2 710 aa12.48□□□□□ -0.41
COL6A4P1-201ENST00000446690 ZRANB1Q9UGI0 708 aa12.48□□□□□ -0.41
COL6A4P1-201ENST00000446690 TBX22Q9Y458 520 aa12.48□□□□□ -0.41
COL6A4P1-201ENST00000446690 PRR36Q9H6K5 1346 aa12.47□□□□□ -0.41
COL6A4P1-201ENST00000446690 ATP7BP35670 1465 aa12.47□□□□□ -0.41
COL6A4P1-201ENST00000446690 PTPRUQ92729 1446 aa12.46□□□□□ -0.41
COL6A4P1-201ENST00000446690 DIAPH1O60610 1272 aaKnown RBP12.46□□□□□ -0.41
COL6A4P1-201ENST00000446690 TRMT2AQ8IZ69 625 aaKnown RBP12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 CPS1P31327 1500 aa12.45□□□□□ -0.42
COL6A4P1-201ENST00000446690 SHPRHQ149N8 1683 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms