RNA–Protein interactions for RNA: ENST00000446548.1

LINC00578-204, long intergenic non-protein coding RNA 578, humanhuman

TSL 4 BASIC

Gene LINC00578, Length 519 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00578-204ENST00000446548 NBPF8Q3BBV2 869 aa12.47□□□□□ -0.41
LINC00578-204ENST00000446548 CCDC144AA2RUR9 1427 aa12.46□□□□□ -0.41
LINC00578-204ENST00000446548 PTPRTO14522 1441 aa12.46□□□□□ -0.41
LINC00578-204ENST00000446548 YEATS2Q9ULM3 1422 aa12.46□□□□□ -0.41
LINC00578-204ENST00000446548 KIF3BO15066 747 aa12.46□□□□□ -0.41
LINC00578-204ENST00000446548 NKX1-1Q15270 411 aaPredicted RBP12.46□□□□□ -0.41
LINC00578-204ENST00000446548 MYT1LQ9UL68 1186 aa12.46□□□□□ -0.41
LINC00578-204ENST00000446548 POLR1AO95602 1720 aaPredicted RBP12.45□□□□□ -0.42
LINC00578-204ENST00000446548 KANK1Q14678 1352 aa12.45□□□□□ -0.42
LINC00578-204ENST00000446548 CAMSAP1Q5T5Y3 1602 aa12.45□□□□□ -0.42
LINC00578-204ENST00000446548 REREQ9P2R6 1566 aa12.45□□□□□ -0.42
LINC00578-204ENST00000446548 ZC3H13Q5T200 1668 aaKnown RBP12.45□□□□□ -0.42
LINC00578-204ENST00000446548 ABCC3O15438 1527 aa12.44□□□□□ -0.42
LINC00578-204ENST00000446548 MICALL2Q8IY33 904 aa12.44□□□□□ -0.42
LINC00578-204ENST00000446548 SLAIN1Q8ND83 568 aa12.44□□□□□ -0.42
LINC00578-204ENST00000446548 BBXQ8WY36 941 aaPredicted RBP12.44□□□□□ -0.42
LINC00578-204ENST00000446548 SIGLEC1Q9BZZ2 1709 aa12.44□□□□□ -0.42
LINC00578-204ENST00000446548 TRPM1Q7Z4N2 1603 aa12.44□□□□□ -0.42
LINC00578-204ENST00000446548 RALGAPBQ86X10 1494 aa12.43□□□□□ -0.42
LINC00578-204ENST00000446548 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
LINC00578-204ENST00000446548 SPATA31E1Q6ZUB1 1445 aa12.42□□□□□ -0.42
LINC00578-204ENST00000446548 NEURL4Q96JN8 1562 aa12.42□□□□□ -0.42
LINC00578-204ENST00000446548 ARHGEF40Q8TER5 1519 aa12.42□□□□□ -0.42
LINC00578-204ENST00000446548 MROH2AA6NES4 1674 aa12.42□□□□□ -0.42
LINC00578-204ENST00000446548 KIF1BO60333 1816 aa12.41□□□□□ -0.42
LINC00578-204ENST00000446548 COL17A1Q9UMD9 1497 aaPredicted RBP12.41□□□□□ -0.42
LINC00578-204ENST00000446548 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.41□□□□□ -0.42
LINC00578-204ENST00000446548 IFT172Q9UG01 1749 aa12.41□□□□□ -0.42
LINC00578-204ENST00000446548 HIRIP3Q9BW71 556 aaPredicted RBP12.4□□□□□ -0.42
LINC00578-204ENST00000446548 UGGT1Q9NYU2 1555 aa12.39□□□□□ -0.43
LINC00578-204ENST00000446548 CFAP65Q6ZU64 1925 aaKnown RBP12.39□□□□□ -0.43
LINC00578-204ENST00000446548 HSPA5P11021 654 aaKnown RBP12.39□□□□□ -0.43
LINC00578-204ENST00000446548 LAMC1P11047 1609 aa12.39□□□□□ -0.43
LINC00578-204ENST00000446548 PRAG1Q86YV5 1406 aa12.38□□□□□ -0.43
LINC00578-204ENST00000446548 AGLP35573 1532 aa12.38□□□□□ -0.43
LINC00578-204ENST00000446548 MADDQ8WXG6 1647 aa12.38□□□□□ -0.43
LINC00578-204ENST00000446548 NPATQ14207 1427 aa12.37□□□□□ -0.43
LINC00578-204ENST00000446548 PIK3C2BO00750 1634 aa12.37□□□□□ -0.43
LINC00578-204ENST00000446548 SYNMO15061 1565 aa12.36□□□□□ -0.43
LINC00578-204ENST00000446548 PPP1R37O75864 691 aa12.36□□□□□ -0.43
LINC00578-204ENST00000446548 GTPBP6O43824 516 aaPredicted RBP12.35□□□□□ -0.43
LINC00578-204ENST00000446548 EIF4G2P78344 907 aaKnown RBP eCLIP12.35□□□□□ -0.43
LINC00578-204ENST00000446548 ADGRB3O60242 1522 aa12.35□□□□□ -0.43
LINC00578-204ENST00000446548 PREX1Q8TCU6 1659 aa12.35□□□□□ -0.43
LINC00578-204ENST00000446548 DCAF11Q8TEB1 546 aa12.34□□□□□ -0.43
LINC00578-204ENST00000446548 ARHGAP31Q2M1Z3 1444 aa12.34□□□□□ -0.43
LINC00578-204ENST00000446548 GGT6Q6P531 493 aa12.33□□□□□ -0.44
LINC00578-204ENST00000446548 NOS1P29475 1434 aa12.33□□□□□ -0.44
LINC00578-204ENST00000446548 CNTLNQ9NXG0 1405 aa12.33□□□□□ -0.44
LINC00578-204ENST00000446548 KIAA1210Q9ULL0 1709 aa12.33□□□□□ -0.44
LINC00578-204ENST00000446548 PPLO60437 1756 aa12.33□□□□□ -0.44
LINC00578-204ENST00000446548 CLTCQ00610 1675 aaKnown RBP12.32□□□□□ -0.44
LINC00578-204ENST00000446548 RGL3Q3MIN7 710 aa12.32□□□□□ -0.44
LINC00578-204ENST00000446548 ZNF326Q5BKZ1 582 aaKnown RBP12.32□□□□□ -0.44
LINC00578-204ENST00000446548 KDM2AQ9Y2K7 1162 aa12.32□□□□□ -0.44
LINC00578-204ENST00000446548 IQGAP1P46940 1657 aa12.32□□□□□ -0.44
LINC00578-204ENST00000446548 GPRASP1Q5JY77 1395 aa12.31□□□□□ -0.44
LINC00578-204ENST00000446548 USP47Q96K76 1375 aa12.31□□□□□ -0.44
LINC00578-204ENST00000446548 SNPHO15079 494 aa12.31□□□□□ -0.44
LINC00578-204ENST00000446548 WASHC2AQ641Q2 1341 aa12.31□□□□□ -0.44
LINC00578-204ENST00000446548 MYOM2P54296 1465 aa12.3□□□□□ -0.44
LINC00578-204ENST00000446548 DDX10Q13206 875 aaKnown RBP12.3□□□□□ -0.44
LINC00578-204ENST00000446548 WASHC2CQ9Y4E1 1318 aa12.3□□□□□ -0.44
LINC00578-204ENST00000446548 MYO5BQ9ULV0 1848 aa12.3□□□□□ -0.44
LINC00578-204ENST00000446548 SPRYD3Q8NCJ5 442 aa12.29□□□□□ -0.44
LINC00578-204ENST00000446548 CCDC7Q96M83 1385 aa12.29□□□□□ -0.44
LINC00578-204ENST00000446548 C11orf95C9JLR9 678 aaPredicted RBP12.28□□□□□ -0.44
LINC00578-204ENST00000446548 NRXN1Q9ULB1 1477 aa12.27□□□□□ -0.44
LINC00578-204ENST00000446548 ROCK2O75116 1388 aaKnown RBP12.27□□□□□ -0.45
LINC00578-204ENST00000446548 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
LINC00578-204ENST00000446548 CARD11Q9BXL7 1154 aa12.25□□□□□ -0.45
LINC00578-204ENST00000446548 ERVK-7P63135 1459 aa12.25□□□□□ -0.45
LINC00578-204ENST00000446548 TMEM131LA2VDJ0 1609 aa12.25□□□□□ -0.45
LINC00578-204ENST00000446548 NBPF1Q3BBV0 1214 aa12.24□□□□□ -0.45
LINC00578-204ENST00000446548 NEXMIFQ5QGS0 1516 aa12.24□□□□□ -0.45
LINC00578-204ENST00000446548 TMEM92Q6UXU6 159 aa12.24□□□□□ -0.45
LINC00578-204ENST00000446548 SPATA31D1Q6ZQQ2 1576 aa12.24□□□□□ -0.45
LINC00578-204ENST00000446548 KIF7Q2M1P5 1343 aa12.23□□□□□ -0.45
LINC00578-204ENST00000446548 PAXIP1Q6ZW49 1069 aaPredicted RBP12.23□□□□□ -0.45
LINC00578-204ENST00000446548 STAC3Q96MF2 364 aa12.23□□□□□ -0.45
LINC00578-204ENST00000446548 CFAP44Q96MT7 982 aa12.23□□□□□ -0.45
LINC00578-204ENST00000446548 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
LINC00578-204ENST00000446548 SETBP1Q9Y6X0 1596 aa12.21□□□□□ -0.46
LINC00578-204ENST00000446548 MYO3AQ8NEV4 1616 aa12.19□□□□□ -0.46
LINC00578-204ENST00000446548 ADGRF5Q8IZF2 1346 aa12.19□□□□□ -0.46
LINC00578-204ENST00000446548 ST20-MTHFSA0A0A6YYL1 179 aa12.19□□□□□ -0.46
LINC00578-204ENST00000446548 C2orf72A6NCS6 295 aa12.19□□□□□ -0.46
LINC00578-204ENST00000446548 PIK3C2GO75747 1445 aa12.19□□□□□ -0.46
LINC00578-204ENST00000446548 ARID4BQ4LE39 1312 aaPredicted RBP12.18□□□□□ -0.46
LINC00578-204ENST00000446548 DOK7Q18PE1 504 aa12.18□□□□□ -0.46
LINC00578-204ENST00000446548 SCAF11Q99590 1463 aaKnown RBP12.18□□□□□ -0.46
LINC00578-204ENST00000446548 KIF3CO14782 793 aa12.17□□□□□ -0.46
LINC00578-204ENST00000446548 FER1L4A9Z1Z3 1794 aa12.17□□□□□ -0.46
LINC00578-204ENST00000446548 ADGRB1O14514 1584 aa12.17□□□□□ -0.46
LINC00578-204ENST00000446548 RPGRIP1LQ68CZ1 1315 aa12.16□□□□□ -0.46
LINC00578-204ENST00000446548 IDI1Q13907 227 aa12.16□□□□□ -0.46
LINC00578-204ENST00000446548 FBXO31Q5XUX0 539 aaPredicted RBP12.16□□□□□ -0.46
LINC00578-204ENST00000446548 SLC52A1Q9NWF4 448 aa12.16□□□□□ -0.46
LINC00578-204ENST00000446548 ZFYVE9O95405 1425 aa12.15□□□□□ -0.46
LINC00578-204ENST00000446548 RIMBP2O15034 1052 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms