RNA–Protein interactions for RNA: ENST00000446317.1

SF3A3P1-201, Transcript of splicing factor 3a, subunit 3 pseudogene 1, humanhuman

BASIC

Gene SF3A3P1, Length 1,477 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3P1-201ENST00000446317 ABCC11Q96J66 1382 aa10.59□□□□□ -0.71
SF3A3P1-201ENST00000446317 CHD2O14647 1828 aaKnown RBP10.58□□□□□ -0.72
SF3A3P1-201ENST00000446317 TMEM94Q12767 1356 aa10.58□□□□□ -0.72
SF3A3P1-201ENST00000446317 EIF3AQ14152 1382 aaKnown RBP10.58□□□□□ -0.72
SF3A3P1-201ENST00000446317 TESK2Q96S53 571 aa10.58□□□□□ -0.72
SF3A3P1-201ENST00000446317 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.57□□□□□ -0.72
SF3A3P1-201ENST00000446317 CPS1P31327 1500 aa10.57□□□□□ -0.72
SF3A3P1-201ENST00000446317 SRPK2P78362 688 aaKnown RBP10.57□□□□□ -0.72
SF3A3P1-201ENST00000446317 ZNF316A6NFI3 1004 aaPredicted RBP10.56□□□□□ -0.72
SF3A3P1-201ENST00000446317 CDK19Q9BWU1 502 aa10.56□□□□□ -0.72
SF3A3P1-201ENST00000446317 KNDC1Q76NI1 1749 aa10.56□□□□□ -0.72
SF3A3P1-201ENST00000446317 NWD1Q149M9 1564 aa10.56□□□□□ -0.72
SF3A3P1-201ENST00000446317 TULP4Q9NRJ4 1543 aa10.56□□□□□ -0.72
SF3A3P1-201ENST00000446317 TMC1Q8TDI8 760 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 LRRC7Q96NW7 1537 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 NALCNQ8IZF0 1738 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 PIK3R4Q99570 1358 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 KIF7Q2M1P5 1343 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 WASHC2AQ641Q2 1341 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 PLEKHG5O94827 1062 aa10.55□□□□□ -0.72
SF3A3P1-201ENST00000446317 DLC1Q96QB1 1528 aa10.54□□□□□ -0.72
SF3A3P1-201ENST00000446317 TECPR2O15040 1411 aa10.54□□□□□ -0.72
SF3A3P1-201ENST00000446317 PTCH1Q13635 1447 aa10.54□□□□□ -0.72
SF3A3P1-201ENST00000446317 TMF1P82094 1093 aa10.54□□□□□ -0.72
SF3A3P1-201ENST00000446317 SCAF1Q9H7N4 1312 aaKnown RBP10.53□□□□□ -0.72
SF3A3P1-201ENST00000446317 DDX10Q13206 875 aaKnown RBP10.53□□□□□ -0.72
SF3A3P1-201ENST00000446317 PMFBP1Q8TBY8 1022 aa10.53□□□□□ -0.72
SF3A3P1-201ENST00000446317 DDX17Q92841 729 aaKnown RBP10.53□□□□□ -0.72
SF3A3P1-201ENST00000446317 FAM135BQ49AJ0 1406 aa10.53□□□□□ -0.72
SF3A3P1-201ENST00000446317 EVC2Q86UK5 1308 aa10.52□□□□□ -0.73
SF3A3P1-201ENST00000446317 PRR36Q9H6K5 1346 aa10.52□□□□□ -0.73
SF3A3P1-201ENST00000446317 NKTRP30414 1462 aaKnown RBP10.52□□□□□ -0.73
SF3A3P1-201ENST00000446317 WASLO00401 505 aaPredicted RBP10.52□□□□□ -0.73
SF3A3P1-201ENST00000446317 LTBP4Q8N2S1 1624 aa10.52□□□□□ -0.73
SF3A3P1-201ENST00000446317 CCDC7Q96M83 1385 aa10.52□□□□□ -0.73
SF3A3P1-201ENST00000446317 PIP4K2BP78356 416 aa10.51□□□□□ -0.73
SF3A3P1-201ENST00000446317 XPCQ01831 940 aaPredicted RBP10.51□□□□□ -0.73
SF3A3P1-201ENST00000446317 XIRP1Q702N8 1843 aaKnown RBP10.51□□□□□ -0.73
SF3A3P1-201ENST00000446317 ADGRL3Q9HAR2 1447 aa10.5□□□□□ -0.73
SF3A3P1-201ENST00000446317 ATF3P18847 181 aa10.5□□□□□ -0.73
SF3A3P1-201ENST00000446317 NUDT16Q96DE0 195 aaKnown RBP10.5□□□□□ -0.73
SF3A3P1-201ENST00000446317 SLC12A5Q9H2X9 1139 aa10.5□□□□□ -0.73
SF3A3P1-201ENST00000446317 MSH6P52701 1360 aa10.5□□□□□ -0.73
SF3A3P1-201ENST00000446317 ESCO1Q5FWF5 840 aa10.49□□□□□ -0.73
SF3A3P1-201ENST00000446317 SIRT1Q96EB6 747 aa10.49□□□□□ -0.73
SF3A3P1-201ENST00000446317 ORAI2Q96SN7 254 aa10.49□□□□□ -0.73
SF3A3P1-201ENST00000446317 CABP1Q9NZU7 370 aa10.49□□□□□ -0.73
SF3A3P1-201ENST00000446317 C19orf44Q9H6X5 657 aa10.48□□□□□ -0.73
SF3A3P1-201ENST00000446317 PPIP5K1Q6PFW1 1433 aa10.47□□□□□ -0.73
SF3A3P1-201ENST00000446317 USP32Q8NFA0 1604 aa10.47□□□□□ -0.73
SF3A3P1-201ENST00000446317 RGPD8O14715 1765 aaPredicted RBP10.46□□□□□ -0.73
SF3A3P1-201ENST00000446317 ATP7BP35670 1465 aa10.46□□□□□ -0.73
SF3A3P1-201ENST00000446317 UBAP1LF5GYI3 381 aa10.46□□□□□ -0.74
SF3A3P1-201ENST00000446317 CERKQ8TCT0 537 aa10.46□□□□□ -0.74
SF3A3P1-201ENST00000446317 PANK3Q9H999 370 aa10.46□□□□□ -0.74
SF3A3P1-201ENST00000446317 ADGRB2O60241 1585 aa10.45□□□□□ -0.74
SF3A3P1-201ENST00000446317 FMN2Q9NZ56 1722 aa10.45□□□□□ -0.74
SF3A3P1-201ENST00000446317 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.45□□□□□ -0.74
SF3A3P1-201ENST00000446317 NGDNQ8NEJ9 315 aaKnown RBP10.45□□□□□ -0.74
SF3A3P1-201ENST00000446317 MST1RQ04912 1400 aa10.45□□□□□ -0.74
SF3A3P1-201ENST00000446317 CDC42BPGQ6DT37 1551 aa10.45□□□□□ -0.74
SF3A3P1-201ENST00000446317 SBNO2Q9Y2G9 1366 aa10.44□□□□□ -0.74
SF3A3P1-201ENST00000446317 MYOM1P52179 1685 aa10.44□□□□□ -0.74
SF3A3P1-201ENST00000446317 FOXO3O43524 673 aa10.44□□□□□ -0.74
SF3A3P1-201ENST00000446317 NUTM2GQ5VZR2 741 aa10.44□□□□□ -0.74
SF3A3P1-201ENST00000446317 C1orf167Q5SNV9 1468 aa10.44□□□□□ -0.74
SF3A3P1-201ENST00000446317 PAK3O75914 559 aaPredicted RBP10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 LMOD2Q6P5Q4 547 aa10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 CADPS2Q86UW7 1296 aa10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 SLAIN2Q9P270 581 aa10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 ZRANB1Q9UGI0 708 aa10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 PHF8Q9UPP1 1060 aa10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 ACEP12821 1306 aa10.43□□□□□ -0.74
SF3A3P1-201ENST00000446317 SOX12O15370 315 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 CDCA8Q53HL2 280 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 CC2D1BQ5T0F9 858 aaKnown RBP10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 CARD14Q9BXL6 1004 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 CCDC61Q9Y6R9 512 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 A0A1W2PP64 1363 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 ATAD2Q6PL18 1390 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 BRINP3Q76B58 766 aa10.42□□□□□ -0.74
SF3A3P1-201ENST00000446317 NSD3Q9BZ95 1437 aa10.41□□□□□ -0.74
SF3A3P1-201ENST00000446317 TNNT2P45379 298 aaPredicted RBP10.41□□□□□ -0.74
SF3A3P1-201ENST00000446317 HDGFL2Q7Z4V5 671 aaPredicted RBP10.41□□□□□ -0.74
SF3A3P1-201ENST00000446317 KTN1Q86UP2 1357 aaKnown RBP10.4□□□□□ -0.74
SF3A3P1-201ENST00000446317 TOPAZ1Q8N9V7 1692 aa10.4□□□□□ -0.74
SF3A3P1-201ENST00000446317 CD163L1Q9NR16 1453 aa10.4□□□□□ -0.74
SF3A3P1-201ENST00000446317 PSME1Q06323 249 aa10.4□□□□□ -0.74
SF3A3P1-201ENST00000446317 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
SF3A3P1-201ENST00000446317 NME9Q86XW9 330 aa10.39□□□□□ -0.75
SF3A3P1-201ENST00000446317 GGNBP2Q9H3C7 697 aa10.39□□□□□ -0.75
SF3A3P1-201ENST00000446317 ANKARQ7Z5J8 1434 aa10.39□□□□□ -0.75
SF3A3P1-201ENST00000446317 NCOA3Q9Y6Q9 1424 aa10.39□□□□□ -0.75
SF3A3P1-201ENST00000446317 FBLN1P23142 703 aa10.38□□□□□ -0.75
SF3A3P1-201ENST00000446317 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
SF3A3P1-201ENST00000446317 KRT28Q7Z3Y7 464 aa10.38□□□□□ -0.75
SF3A3P1-201ENST00000446317 TERF2IPQ9NYB0 399 aa10.38□□□□□ -0.75
SF3A3P1-201ENST00000446317 ROBO1Q9Y6N7 1651 aa10.38□□□□□ -0.75
SF3A3P1-201ENST00000446317 TOM1O60784 492 aa10.37□□□□□ -0.75
SF3A3P1-201ENST00000446317 DCCP43146 1447 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms