RNA–Protein interactions for RNA: ENST00000444739.6

CASP4-203, Transcript of caspase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CASP4, Length 2,158 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-203ENST00000444739 C22orf23Q9BZE7 217 aa12.72□□□□□ -0.37
CASP4-203ENST00000444739 TNNQ9UQP3 1299 aa12.72□□□□□ -0.37
CASP4-203ENST00000444739 NCOA3Q9Y6Q9 1424 aa12.72□□□□□ -0.37
CASP4-203ENST00000444739 SHPRHQ149N8 1683 aa12.72□□□□□ -0.37
CASP4-203ENST00000444739 DUOX2Q9NRD8 1548 aa12.71□□□□□ -0.37
CASP4-203ENST00000444739 RWDD1Q9H446 243 aaPredicted RBP12.71□□□□□ -0.37
CASP4-203ENST00000444739 DNAJC5BQ9UF47 199 aa12.71□□□□□ -0.37
CASP4-203ENST00000444739 SHROOM2Q13796 1616 aa12.7□□□□□ -0.38
CASP4-203ENST00000444739 TTC37Q6PGP7 1564 aa12.7□□□□□ -0.38
CASP4-203ENST00000444739 DDIT3P35638 169 aa12.7□□□□□ -0.38
CASP4-203ENST00000444739 IQSEC2Q5JU85 1478 aa12.69□□□□□ -0.38
CASP4-203ENST00000444739 POLR3AO14802 1390 aaPredicted RBP12.69□□□□□ -0.38
CASP4-203ENST00000444739 MFAP1P55081 439 aaKnown RBP12.68□□□□□ -0.38
CASP4-203ENST00000444739 JPH4Q96JJ6 628 aa12.68□□□□□ -0.38
CASP4-203ENST00000444739 TPM2P07951 284 aa12.67□□□□□ -0.38
CASP4-203ENST00000444739 KIAA1210Q9ULL0 1709 aa12.67□□□□□ -0.38
CASP4-203ENST00000444739 GAS2L3Q86XJ1 694 aa12.67□□□□□ -0.38
CASP4-203ENST00000444739 HSCBQ8IWL3 235 aa12.67□□□□□ -0.38
CASP4-203ENST00000444739 CARD14Q9BXL6 1004 aa12.66□□□□□ -0.38
CASP4-203ENST00000444739 ERVK-7P63135 1459 aa12.66□□□□□ -0.38
CASP4-203ENST00000444739 TRIM44Q96DX7 344 aaPredicted RBP12.66□□□□□ -0.38
CASP4-203ENST00000444739 MVPQ14764 893 aaKnown RBP12.65□□□□□ -0.38
CASP4-203ENST00000444739 BCL2L13Q9BXK5 485 aa12.65□□□□□ -0.38
CASP4-203ENST00000444739 TRPM2O94759 1503 aa12.64□□□□□ -0.39
CASP4-203ENST00000444739 WDR63Q8IWG1 891 aa12.64□□□□□ -0.39
CASP4-203ENST00000444739 TNPO1Q92973 898 aaKnown RBP12.64□□□□□ -0.39
CASP4-203ENST00000444739 KANK1Q14678 1352 aa12.64□□□□□ -0.39
CASP4-203ENST00000444739 CHMP7Q8WUX9 453 aaPredicted RBP12.64□□□□□ -0.39
CASP4-203ENST00000444739 ARHGAP5Q13017 1502 aa12.64□□□□□ -0.39
CASP4-203ENST00000444739 SMC5Q8IY18 1101 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 SNX21Q969T3 373 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 RUNDC1Q96C34 613 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 PDCL3Q9H2J4 239 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 CIZ1Q9ULV3 898 aaPredicted RBP12.63□□□□□ -0.39
CASP4-203ENST00000444739 RRP7AQ9Y3A4 280 aaKnown RBP12.63□□□□□ -0.39
CASP4-203ENST00000444739 NEUROD2Q15784 382 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 TCP11L2Q8N4U5 519 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 STAC3Q96MF2 364 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 CLTCL1P53675 1640 aa12.63□□□□□ -0.39
CASP4-203ENST00000444739 RBM25P49756 843 aaKnown RBP12.62□□□□□ -0.39
CASP4-203ENST00000444739 HDAC1Q13547 482 aaPredicted RBP12.62□□□□□ -0.39
CASP4-203ENST00000444739 RAB3GAP1Q15042 981 aa12.62□□□□□ -0.39
CASP4-203ENST00000444739 SKOR2Q2VWA4 1001 aaPredicted RBP12.62□□□□□ -0.39
CASP4-203ENST00000444739 CCDC27Q2M243 656 aa12.61□□□□□ -0.39
CASP4-203ENST00000444739 GBP4Q96PP9 640 aa12.61□□□□□ -0.39
CASP4-203ENST00000444739 KIAA1211Q6ZU35 1233 aa12.6□□□□□ -0.39
CASP4-203ENST00000444739 PPP1R9BQ96SB3 815 aa12.6□□□□□ -0.39
CASP4-203ENST00000444739 CCDC173Q0VFZ6 552 aa12.6□□□□□ -0.39
CASP4-203ENST00000444739 ZKSCAN2Q63HK3 967 aa12.6□□□□□ -0.39
CASP4-203ENST00000444739 DZIP1LQ8IYY4 767 aaKnown RBP12.6□□□□□ -0.39
CASP4-203ENST00000444739 ERCC6Q03468 1493 aa12.6□□□□□ -0.39
CASP4-203ENST00000444739 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.6□□□□□ -0.39
CASP4-203ENST00000444739 PTMSP20962 102 aa12.59□□□□□ -0.39
CASP4-203ENST00000444739 PTPRTO14522 1441 aa12.59□□□□□ -0.39
CASP4-203ENST00000444739 MYO3AQ8NEV4 1616 aa12.58□□□□□ -0.39
CASP4-203ENST00000444739 SLC24A1O60721 1099 aa12.58□□□□□ -0.4
CASP4-203ENST00000444739 FTSJ3Q8IY81 847 aaKnown RBP12.58□□□□□ -0.4
CASP4-203ENST00000444739 ABCA6Q8N139 1617 aa12.58□□□□□ -0.4
CASP4-203ENST00000444739 OFD1O75665 1012 aa12.57□□□□□ -0.4
CASP4-203ENST00000444739 ZSCAN30Q86W11 494 aa12.57□□□□□ -0.4
CASP4-203ENST00000444739 ADGRB2O60241 1585 aa12.57□□□□□ -0.4
CASP4-203ENST00000444739 HSP90AB1P08238 724 aaKnown RBP12.57□□□□□ -0.4
CASP4-203ENST00000444739 ZNF518AQ6AHZ1 1483 aa12.57□□□□□ -0.4
CASP4-203ENST00000444739 MAP3K4Q9Y6R4 1608 aa12.57□□□□□ -0.4
CASP4-203ENST00000444739 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
CASP4-203ENST00000444739 IBTKQ9P2D0 1353 aaPredicted RBP12.56□□□□□ -0.4
CASP4-203ENST00000444739 NASPP49321 788 aaPredicted RBP12.56□□□□□ -0.4
CASP4-203ENST00000444739 TERF1P54274 439 aa12.56□□□□□ -0.4
CASP4-203ENST00000444739 FBLN2P98095 1184 aa12.56□□□□□ -0.4
CASP4-203ENST00000444739 NEURL4Q96JN8 1562 aa12.56□□□□□ -0.4
CASP4-203ENST00000444739 KIF2CQ99661 725 aa12.56□□□□□ -0.4
CASP4-203ENST00000444739 NSD3Q9BZ95 1437 aa12.56□□□□□ -0.4
CASP4-203ENST00000444739 TRIM27P14373 513 aa12.55□□□□□ -0.4
CASP4-203ENST00000444739 RIPK4P57078 832 aa12.55□□□□□ -0.4
CASP4-203ENST00000444739 CALD1Q05682 793 aaKnown RBP12.55□□□□□ -0.4
CASP4-203ENST00000444739 MORC1Q86VD1 984 aa12.55□□□□□ -0.4
CASP4-203ENST00000444739 USP32Q8NFA0 1604 aa12.55□□□□□ -0.4
CASP4-203ENST00000444739 SBNO2Q9Y2G9 1366 aa12.55□□□□□ -0.4
CASP4-203ENST00000444739 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
CASP4-203ENST00000444739 DDX19BQ9UMR2 479 aa12.54□□□□□ -0.4
CASP4-203ENST00000444739 CFAP74Q9C0B2 1584 aa12.54□□□□□ -0.4
CASP4-203ENST00000444739 ADGRL1O94910 1474 aa12.54□□□□□ -0.4
CASP4-203ENST00000444739 ARHGAP31Q2M1Z3 1444 aa12.54□□□□□ -0.4
CASP4-203ENST00000444739 CD2BP2O95400 341 aaKnown RBP12.54□□□□□ -0.4
CASP4-203ENST00000444739 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.54□□□□□ -0.4
CASP4-203ENST00000444739 CLEC17AQ6ZS10 378 aa12.54□□□□□ -0.4
CASP4-203ENST00000444739 MYOM2P54296 1465 aa12.54□□□□□ -0.4
CASP4-203ENST00000444739 TET3O43151 1660 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 DEPDC5O75140 1603 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 TNNT2P45379 298 aaPredicted RBP12.53□□□□□ -0.4
CASP4-203ENST00000444739 NUCB1Q02818 461 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 KLHL40Q2TBA0 621 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 CFAP70Q5T0N1 1121 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 ITPRIPQ8IWB1 547 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 SMC4Q9NTJ3 1288 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 IFT172Q9UG01 1749 aa12.53□□□□□ -0.4
CASP4-203ENST00000444739 ZC3H13Q5T200 1668 aaKnown RBP12.52□□□□□ -0.41
CASP4-203ENST00000444739 K7ELQ4 463 aaPredicted RBP12.52□□□□□ -0.41
CASP4-203ENST00000444739 MSNP26038 577 aaKnown RBP12.52□□□□□ -0.41
CASP4-203ENST00000444739 SSFA2P28290 1259 aa12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms