RNA–Protein interactions for RNA: ENST00000443839.1

SMPD4P1-203, Transcript of sphingomyelin phosphodiesterase 4 pseudogene 1, humanhuman

TSL 1 (best) BASIC

Gene SMPD4P1, Length 2,108 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4P1-203ENST00000443839 MYOM1P52179 1685 aa13.02□□□□□ -0.33
SMPD4P1-203ENST00000443839 KDM4FA0A1W2PPD8 638 aa13.01□□□□□ -0.33
SMPD4P1-203ENST00000443839 CPS1P31327 1500 aa13.01□□□□□ -0.33
SMPD4P1-203ENST00000443839 CCER2I3L3R5 266 aa13.01□□□□□ -0.33
SMPD4P1-203ENST00000443839 SRPK2P78362 688 aaKnown RBP13.01□□□□□ -0.33
SMPD4P1-203ENST00000443839 PLEKHH1Q9ULM0 1364 aa13.01□□□□□ -0.33
SMPD4P1-203ENST00000443839 FAM135BQ49AJ0 1406 aa13.01□□□□□ -0.33
SMPD4P1-203ENST00000443839 TMC1Q8TDI8 760 aa13□□□□□ -0.33
SMPD4P1-203ENST00000443839 SIRT1Q96EB6 747 aa13□□□□□ -0.33
SMPD4P1-203ENST00000443839 CABP2Q9NPB3 220 aa13□□□□□ -0.33
SMPD4P1-203ENST00000443839 PUS7Q96PZ0 661 aaKnown RBP12.99□□□□□ -0.33
SMPD4P1-203ENST00000443839 ROBO2Q9HCK4 1378 aa12.99□□□□□ -0.33
SMPD4P1-203ENST00000443839 PER1O15534 1290 aaPredicted RBP12.98□□□□□ -0.33
SMPD4P1-203ENST00000443839 YTHDC1Q96MU7 727 aaKnown RBP12.98□□□□□ -0.33
SMPD4P1-203ENST00000443839 AMOTL2Q9Y2J4 779 aa12.98□□□□□ -0.33
SMPD4P1-203ENST00000443839 PTPRUQ92729 1446 aa12.98□□□□□ -0.33
SMPD4P1-203ENST00000443839 KNSTRNQ9Y448 316 aa12.98□□□□□ -0.33
SMPD4P1-203ENST00000443839 NPHP4O75161 1426 aaPredicted RBP12.98□□□□□ -0.33
SMPD4P1-203ENST00000443839 PIK3R4Q99570 1358 aa12.97□□□□□ -0.33
SMPD4P1-203ENST00000443839 KTN1Q86UP2 1357 aaKnown RBP12.97□□□□□ -0.33
SMPD4P1-203ENST00000443839 CDK19Q9BWU1 502 aa12.97□□□□□ -0.33
SMPD4P1-203ENST00000443839 ATAD2Q6PL18 1390 aa12.96□□□□□ -0.33
SMPD4P1-203ENST00000443839 SLC12A5Q9H2X9 1139 aa12.96□□□□□ -0.33
SMPD4P1-203ENST00000443839 NCKAP5LQ9HCH0 1330 aa12.96□□□□□ -0.34
SMPD4P1-203ENST00000443839 PTCH1Q13635 1447 aa12.95□□□□□ -0.34
SMPD4P1-203ENST00000443839 CC2D1BQ5T0F9 858 aaKnown RBP12.95□□□□□ -0.34
SMPD4P1-203ENST00000443839 NINLQ9Y2I6 1382 aa12.95□□□□□ -0.34
SMPD4P1-203ENST00000443839 RALBP1Q15311 655 aa12.94□□□□□ -0.34
SMPD4P1-203ENST00000443839 XRN1Q8IZH2 1706 aaKnown RBP12.94□□□□□ -0.34
SMPD4P1-203ENST00000443839 WASLO00401 505 aaPredicted RBP12.94□□□□□ -0.34
SMPD4P1-203ENST00000443839 KCNA6P17658 529 aa12.93□□□□□ -0.34
SMPD4P1-203ENST00000443839 HSPA2P54652 639 aa12.92□□□□□ -0.34
SMPD4P1-203ENST00000443839 ANKRD36BQ8N2N9 1353 aa12.92□□□□□ -0.34
SMPD4P1-203ENST00000443839 PARD3Q8TEW0 1356 aa12.92□□□□□ -0.34
SMPD4P1-203ENST00000443839 CARD14Q9BXL6 1004 aa12.92□□□□□ -0.34
SMPD4P1-203ENST00000443839 MRS2Q9HD23 443 aa12.92□□□□□ -0.34
SMPD4P1-203ENST00000443839 CHD2O14647 1828 aaKnown RBP12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 AMER1Q5JTC6 1135 aaPredicted RBP12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 ADGRB2O60241 1585 aa12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 MYBBP1AQ9BQG0 1328 aaKnown RBP12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 TERF2IPQ9NYB0 399 aa12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 NSD3Q9BZ95 1437 aa12.91□□□□□ -0.34
SMPD4P1-203ENST00000443839 LMTK3Q96Q04 1460 aa12.9□□□□□ -0.34
SMPD4P1-203ENST00000443839 CCDC184Q52MB2 194 aa12.89□□□□□ -0.35
SMPD4P1-203ENST00000443839 CABP1Q9NZU7 370 aa12.89□□□□□ -0.35
SMPD4P1-203ENST00000443839 NPC1L1Q9UHC9 1359 aa12.89□□□□□ -0.35
SMPD4P1-203ENST00000443839 CENPBP07199 599 aaPredicted RBP12.89□□□□□ -0.35
SMPD4P1-203ENST00000443839 A0A1W2PP64 1363 aa12.89□□□□□ -0.35
SMPD4P1-203ENST00000443839 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
SMPD4P1-203ENST00000443839 NUDT16Q96DE0 195 aaKnown RBP12.88□□□□□ -0.35
SMPD4P1-203ENST00000443839 NCBP3Q53F19 620 aaKnown RBP12.88□□□□□ -0.35
SMPD4P1-203ENST00000443839 CCDC61Q9Y6R9 512 aa12.88□□□□□ -0.35
SMPD4P1-203ENST00000443839 CGNL1Q0VF96 1302 aa12.88□□□□□ -0.35
SMPD4P1-203ENST00000443839 PPIP5K1Q6PFW1 1433 aa12.87□□□□□ -0.35
SMPD4P1-203ENST00000443839 NLRP13Q86W25 1043 aa12.87□□□□□ -0.35
SMPD4P1-203ENST00000443839 ATP7BP35670 1465 aa12.86□□□□□ -0.35
SMPD4P1-203ENST00000443839 NUTM2FA1L443 756 aa12.85□□□□□ -0.35
SMPD4P1-203ENST00000443839 BRD4O60885 1362 aaPredicted RBP12.85□□□□□ -0.35
SMPD4P1-203ENST00000443839 USP32Q8NFA0 1604 aa12.85□□□□□ -0.35
SMPD4P1-203ENST00000443839 CD163L1Q9NR16 1453 aa12.85□□□□□ -0.35
SMPD4P1-203ENST00000443839 PRR36Q9H6K5 1346 aa12.85□□□□□ -0.35
SMPD4P1-203ENST00000443839 NWD1Q149M9 1564 aa12.84□□□□□ -0.35
SMPD4P1-203ENST00000443839 C14orf37Q86TY3 774 aa12.84□□□□□ -0.35
SMPD4P1-203ENST00000443839 FAM9BQ8IZU0 186 aa12.84□□□□□ -0.35
SMPD4P1-203ENST00000443839 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
SMPD4P1-203ENST00000443839 NSD2O96028 1365 aa12.83□□□□□ -0.36
SMPD4P1-203ENST00000443839 NALCNQ8IZF0 1738 aa12.83□□□□□ -0.36
SMPD4P1-203ENST00000443839 CDC42BPGQ6DT37 1551 aa12.82□□□□□ -0.36
SMPD4P1-203ENST00000443839 PPP2R1AP30153 589 aa12.82□□□□□ -0.36
SMPD4P1-203ENST00000443839 MORC1Q86VD1 984 aa12.82□□□□□ -0.36
SMPD4P1-203ENST00000443839 NKTRP30414 1462 aaKnown RBP12.82□□□□□ -0.36
SMPD4P1-203ENST00000443839 ADGRL3Q9HAR2 1447 aa12.81□□□□□ -0.36
SMPD4P1-203ENST00000443839 STRCQ7RTU9 1775 aa12.81□□□□□ -0.36
SMPD4P1-203ENST00000443839 TOPAZ1Q8N9V7 1692 aa12.81□□□□□ -0.36
SMPD4P1-203ENST00000443839 PROSER2Q86WR7 435 aaPredicted RBP12.81□□□□□ -0.36
SMPD4P1-203ENST00000443839 CPSF1Q10570 1443 aaKnown RBP12.81□□□□□ -0.36
SMPD4P1-203ENST00000443839 ITSN1Q15811 1721 aa12.81□□□□□ -0.36
SMPD4P1-203ENST00000443839 ANKARQ7Z5J8 1434 aa12.8□□□□□ -0.36
SMPD4P1-203ENST00000443839 NPM3O75607 178 aaKnown RBP12.8□□□□□ -0.36
SMPD4P1-203ENST00000443839 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.8□□□□□ -0.36
SMPD4P1-203ENST00000443839 ZNF692Q9BU19 519 aaPredicted RBP12.8□□□□□ -0.36
SMPD4P1-203ENST00000443839 FMN2Q9NZ56 1722 aa12.79□□□□□ -0.36
SMPD4P1-203ENST00000443839 EDC4Q6P2E9 1401 aaKnown RBP12.79□□□□□ -0.36
SMPD4P1-203ENST00000443839 TNNT2P45379 298 aaPredicted RBP12.79□□□□□ -0.36
SMPD4P1-203ENST00000443839 PNISRQ8TF01 805 aaKnown RBP12.79□□□□□ -0.36
SMPD4P1-203ENST00000443839 PLEKHG3A1L390 1219 aa12.79□□□□□ -0.36
SMPD4P1-203ENST00000443839 GGNBP2Q9H3C7 697 aa12.79□□□□□ -0.36
SMPD4P1-203ENST00000443839 RGPD8O14715 1765 aaPredicted RBP12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 AKAP12Q02952 1782 aa12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 ACEP12821 1306 aa12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 MON2Q7Z3U7 1717 aa12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 FYB1O15117 783 aa12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 PELP1Q8IZL8 1130 aaKnown RBP12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 KIF20BQ96Q89 1820 aa12.78□□□□□ -0.36
SMPD4P1-203ENST00000443839 HNRNPUQ00839 825 aaKnown RBP eCLIP12.77□□□□□ -0.36
SMPD4P1-203ENST00000443839 NGDNQ8NEJ9 315 aaKnown RBP12.77□□□□□ -0.37
SMPD4P1-203ENST00000443839 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
SMPD4P1-203ENST00000443839 GTF3C3Q9Y5Q9 886 aa12.77□□□□□ -0.37
SMPD4P1-203ENST00000443839 STRCP1A6NGW2 1772 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms