RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 UGGT1Q9NYU2 1555 aa19.79■□□□□ 0.76
AP1S3-206ENST00000443700 PPRC1Q5VV67 1664 aaKnown RBP19.79■□□□□ 0.76
AP1S3-206ENST00000443700 CFAP70Q5T0N1 1121 aa19.79■□□□□ 0.76
AP1S3-206ENST00000443700 RUNDC1Q96C34 613 aa19.79■□□□□ 0.76
AP1S3-206ENST00000443700 NSD3Q9BZ95 1437 aa19.79■□□□□ 0.76
AP1S3-206ENST00000443700 FANCAO15360 1455 aa19.79■□□□□ 0.76
AP1S3-206ENST00000443700 PPLO60437 1756 aa19.78■□□□□ 0.76
AP1S3-206ENST00000443700 NCBP3Q53F19 620 aaKnown RBP19.78■□□□□ 0.76
AP1S3-206ENST00000443700 COG6Q9Y2V7 657 aa19.78■□□□□ 0.76
AP1S3-206ENST00000443700 DMRT2Q9Y5R5 561 aa19.78■□□□□ 0.76
AP1S3-206ENST00000443700 ADGRL1O94910 1474 aa19.77■□□□□ 0.76
AP1S3-206ENST00000443700 WDR63Q8IWG1 891 aa19.77■□□□□ 0.76
AP1S3-206ENST00000443700 AFAP1Q8N556 730 aa19.77■□□□□ 0.76
AP1S3-206ENST00000443700 ADGRF5Q8IZF2 1346 aa19.76■□□□□ 0.75
AP1S3-206ENST00000443700 PANK1Q8TE04 598 aa19.76■□□□□ 0.75
AP1S3-206ENST00000443700 ADGRB2O60241 1585 aa19.75■□□□□ 0.75
AP1S3-206ENST00000443700 RARSP54136 660 aaKnown RBP19.75■□□□□ 0.75
AP1S3-206ENST00000443700 CCDC27Q2M243 656 aa19.75■□□□□ 0.75
AP1S3-206ENST00000443700 MORC1Q86VD1 984 aa19.75■□□□□ 0.75
AP1S3-206ENST00000443700 ZNF518AQ6AHZ1 1483 aa19.75■□□□□ 0.75
AP1S3-206ENST00000443700 PHF23Q9BUL5 403 aaPredicted RBP19.74■□□□□ 0.75
AP1S3-206ENST00000443700 KIF3BO15066 747 aa19.73■□□□□ 0.75
AP1S3-206ENST00000443700 CFAP53Q96M91 514 aa19.73■□□□□ 0.75
AP1S3-206ENST00000443700 FAM43AQ8N2R8 423 aa19.72■□□□□ 0.75
AP1S3-206ENST00000443700 NSD2O96028 1365 aa19.72■□□□□ 0.75
AP1S3-206ENST00000443700 RWDD1Q9H446 243 aaPredicted RBP19.72■□□□□ 0.75
AP1S3-206ENST00000443700 NOS1P29475 1434 aa19.71■□□□□ 0.75
AP1S3-206ENST00000443700 KIDINS220Q9ULH0 1771 aa19.7■□□□□ 0.74
AP1S3-206ENST00000443700 L1TD1Q5T7N2 865 aaKnown RBP19.7■□□□□ 0.74
AP1S3-206ENST00000443700 MYH16Q9H6N6 1097 aa19.7■□□□□ 0.74
AP1S3-206ENST00000443700 TBC1D32Q96NH3 1257 aa19.7■□□□□ 0.74
AP1S3-206ENST00000443700 ADGRB1O14514 1584 aa19.7■□□□□ 0.74
AP1S3-206ENST00000443700 TCP11L2Q8N4U5 519 aa19.69■□□□□ 0.74
AP1S3-206ENST00000443700 SEC24BO95487 1268 aa19.68■□□□□ 0.74
AP1S3-206ENST00000443700 CT47B1P0C2W7 299 aaPredicted RBP19.68■□□□□ 0.74
AP1S3-206ENST00000443700 PDZRN3Q9UPQ7 1066 aa19.67■□□□□ 0.74
AP1S3-206ENST00000443700 PUS7Q96PZ0 661 aaKnown RBP19.66■□□□□ 0.74
AP1S3-206ENST00000443700 ARHGEF28Q8N1W1 1705 aaKnown RBP19.65■□□□□ 0.74
AP1S3-206ENST00000443700 GLI2P10070 1586 aa19.65■□□□□ 0.74
AP1S3-206ENST00000443700 ANTXR1Q9H6X2 564 aa19.65■□□□□ 0.74
AP1S3-206ENST00000443700 PCDHB15Q9Y5E8 787 aa19.65■□□□□ 0.74
AP1S3-206ENST00000443700 CFAP74Q9C0B2 1584 aa19.64■□□□□ 0.74
AP1S3-206ENST00000443700 MVPQ14764 893 aaKnown RBP19.64■□□□□ 0.73
AP1S3-206ENST00000443700 NEUROD2Q15784 382 aa19.64■□□□□ 0.73
AP1S3-206ENST00000443700 SLKQ9H2G2 1235 aaPredicted RBP19.64■□□□□ 0.73
AP1S3-206ENST00000443700 RRP7AQ9Y3A4 280 aaKnown RBP19.63■□□□□ 0.73
AP1S3-206ENST00000443700 HECW2Q9P2P5 1572 aa19.63■□□□□ 0.73
AP1S3-206ENST00000443700 PRKCSHP14314 528 aaPredicted RBP19.62■□□□□ 0.73
AP1S3-206ENST00000443700 RPGRIP1LQ68CZ1 1315 aa19.62■□□□□ 0.73
AP1S3-206ENST00000443700 ANKRD36BQ8N2N9 1353 aa19.62■□□□□ 0.73
AP1S3-206ENST00000443700 ANKRD26Q9UPS8 1709 aa19.62■□□□□ 0.73
AP1S3-206ENST00000443700 RLBP1P12271 317 aa19.62■□□□□ 0.73
AP1S3-206ENST00000443700 ZKSCAN2Q63HK3 967 aa19.62■□□□□ 0.73
AP1S3-206ENST00000443700 C14orf93Q9H972 538 aaKnown RBP19.62■□□□□ 0.73
AP1S3-206ENST00000443700 POGKQ9P215 609 aa19.62■□□□□ 0.73
AP1S3-206ENST00000443700 MTHFSP49914 203 aa19.6■□□□□ 0.73
AP1S3-206ENST00000443700 FTSJ3Q8IY81 847 aaKnown RBP19.6■□□□□ 0.73
AP1S3-206ENST00000443700 TBC1D2Q9BYX2 928 aa19.6■□□□□ 0.73
AP1S3-206ENST00000443700 RSPH6AQ9H0K4 717 aa19.6■□□□□ 0.73
AP1S3-206ENST00000443700 TULP4Q9NRJ4 1543 aa19.6■□□□□ 0.73
AP1S3-206ENST00000443700 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.6■□□□□ 0.73
AP1S3-206ENST00000443700 DZIP1LQ8IYY4 767 aaKnown RBP19.59■□□□□ 0.73
AP1S3-206ENST00000443700 SLC12A5Q9H2X9 1139 aa19.59■□□□□ 0.73
AP1S3-206ENST00000443700 TRAK1Q9UPV9 953 aa19.59■□□□□ 0.73
AP1S3-206ENST00000443700 CAMSAP1Q5T5Y3 1602 aa19.59■□□□□ 0.73
AP1S3-206ENST00000443700 TNNT2P45379 298 aaPredicted RBP19.58■□□□□ 0.73
AP1S3-206ENST00000443700 EVC2Q86UK5 1308 aa19.57■□□□□ 0.72
AP1S3-206ENST00000443700 ABCC11Q96J66 1382 aa19.57■□□□□ 0.72
AP1S3-206ENST00000443700 PIK3C2BO00750 1634 aa19.57■□□□□ 0.72
AP1S3-206ENST00000443700 NPATQ14207 1427 aa19.56■□□□□ 0.72
AP1S3-206ENST00000443700 BCL2L13Q9BXK5 485 aa19.56■□□□□ 0.72
AP1S3-206ENST00000443700 TNNQ9UQP3 1299 aa19.56■□□□□ 0.72
AP1S3-206ENST00000443700 HDAC1Q13547 482 aaPredicted RBP19.55■□□□□ 0.72
AP1S3-206ENST00000443700 DDX19BQ9UMR2 479 aa19.55■□□□□ 0.72
AP1S3-206ENST00000443700 CHGAP10645 457 aaKnown RBP19.55■□□□□ 0.72
AP1S3-206ENST00000443700 U2AF1L5P0DN76 240 aaPredicted RBP19.54■□□□□ 0.72
AP1S3-206ENST00000443700 U2AF1Q01081 240 aaKnown RBP eCLIP19.54■□□□□ 0.72
AP1S3-206ENST00000443700 CHMP5Q9NZZ3 219 aa19.54■□□□□ 0.72
AP1S3-206ENST00000443700 IL16Q14005 1332 aa19.53■□□□□ 0.72
AP1S3-206ENST00000443700 C22orf23Q9BZE7 217 aa19.53■□□□□ 0.72
AP1S3-206ENST00000443700 SMC4Q9NTJ3 1288 aa19.52■□□□□ 0.72
AP1S3-206ENST00000443700 FRMPD1Q5SYB0 1578 aa19.52■□□□□ 0.72
AP1S3-206ENST00000443700 ABCC3O15438 1527 aa19.52■□□□□ 0.72
AP1S3-206ENST00000443700 NEXMIFQ5QGS0 1516 aa19.52■□□□□ 0.72
AP1S3-206ENST00000443700 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.71
AP1S3-206ENST00000443700 GOLGA6L3A6NEY3 463 aa19.51■□□□□ 0.71
AP1S3-206ENST00000443700 MCM4P33991 863 aa19.51■□□□□ 0.71
AP1S3-206ENST00000443700 MED14O60244 1454 aa19.51■□□□□ 0.71
AP1S3-206ENST00000443700 CLTCQ00610 1675 aaKnown RBP19.5■□□□□ 0.71
AP1S3-206ENST00000443700 MLH3Q9UHC1 1453 aa19.5■□□□□ 0.71
AP1S3-206ENST00000443700 HSCBQ8IWL3 235 aa19.49■□□□□ 0.71
AP1S3-206ENST00000443700 KIF16BQ96L93 1317 aa19.49■□□□□ 0.71
AP1S3-206ENST00000443700 ASXL2Q76L83 1435 aa19.49■□□□□ 0.71
AP1S3-206ENST00000443700 CFAP65Q6ZU64 1925 aaKnown RBP19.48■□□□□ 0.71
AP1S3-206ENST00000443700 ATF7IPQ6VMQ6 1270 aa19.48■□□□□ 0.71
AP1S3-206ENST00000443700 POGZQ7Z3K3 1410 aa19.48■□□□□ 0.71
AP1S3-206ENST00000443700 CD109Q6YHK3 1445 aa19.47■□□□□ 0.71
AP1S3-206ENST00000443700 DDX11L8A8MPP1 907 aa19.47■□□□□ 0.71
AP1S3-206ENST00000443700 MFAP1P55081 439 aaKnown RBP19.47■□□□□ 0.71
AP1S3-206ENST00000443700 SMC5Q8IY18 1101 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms