RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 C19orf44Q9H6X5 657 aa18.59■□□□□ 0.57
PDLIM2-212ENST00000443561 SOCS7O14512 581 aa18.58■□□□□ 0.56
PDLIM2-212ENST00000443561 NHSL1Q5SYE7 1610 aa18.58■□□□□ 0.56
PDLIM2-212ENST00000443561 RALGAPBQ86X10 1494 aa18.58■□□□□ 0.56
PDLIM2-212ENST00000443561 TONSLQ96HA7 1378 aa18.57■□□□□ 0.56
PDLIM2-212ENST00000443561 CLSPNQ9HAW4 1339 aa18.57■□□□□ 0.56
PDLIM2-212ENST00000443561 SIRT1Q96EB6 747 aa18.57■□□□□ 0.56
PDLIM2-212ENST00000443561 GPRASP1Q5JY77 1395 aa18.56■□□□□ 0.56
PDLIM2-212ENST00000443561 TRAK1Q9UPV9 953 aa18.56■□□□□ 0.56
PDLIM2-212ENST00000443561 QRICH2Q9H0J4 1663 aa18.56■□□□□ 0.56
PDLIM2-212ENST00000443561 COL16A1Q07092 1604 aaPredicted RBP18.56■□□□□ 0.56
PDLIM2-212ENST00000443561 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
PDLIM2-212ENST00000443561 C1orf167Q5SNV9 1468 aa18.55■□□□□ 0.56
PDLIM2-212ENST00000443561 PRAM1Q96QH2 718 aa18.55■□□□□ 0.56
PDLIM2-212ENST00000443561 AHDC1Q5TGY3 1603 aaPredicted RBP18.55■□□□□ 0.56
PDLIM2-212ENST00000443561 C14orf37Q86TY3 774 aa18.54■□□□□ 0.56
PDLIM2-212ENST00000443561 SLAIN2Q9P270 581 aa18.54■□□□□ 0.56
PDLIM2-212ENST00000443561 PHLPP1O60346 1717 aa18.54■□□□□ 0.56
PDLIM2-212ENST00000443561 HSPA1LP34931 641 aa18.53■□□□□ 0.56
PDLIM2-212ENST00000443561 SCAF1Q9H7N4 1312 aaKnown RBP18.52■□□□□ 0.56
PDLIM2-212ENST00000443561 CADPS2Q86UW7 1296 aa18.52■□□□□ 0.56
PDLIM2-212ENST00000443561 SAFB2Q14151 953 aaKnown RBP eCLIP18.51■□□□□ 0.55
PDLIM2-212ENST00000443561 BRINP3Q76B58 766 aa18.5■□□□□ 0.55
PDLIM2-212ENST00000443561 TOPAZ1Q8N9V7 1692 aa18.5■□□□□ 0.55
PDLIM2-212ENST00000443561 ATF3P18847 181 aa18.49■□□□□ 0.55
PDLIM2-212ENST00000443561 TULP4Q9NRJ4 1543 aa18.49■□□□□ 0.55
PDLIM2-212ENST00000443561 ROCK2O75116 1388 aaKnown RBP18.48■□□□□ 0.55
PDLIM2-212ENST00000443561 CCER1Q8TC90 406 aaPredicted RBP18.47■□□□□ 0.55
PDLIM2-212ENST00000443561 ORAI2Q96SN7 254 aa18.46■□□□□ 0.55
PDLIM2-212ENST00000443561 MINK1Q8N4C8 1332 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-212ENST00000443561 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
PDLIM2-212ENST00000443561 ATP7BP35670 1465 aa18.46■□□□□ 0.54
PDLIM2-212ENST00000443561 DDX17Q92841 729 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-212ENST00000443561 HIRIP3Q9BW71 556 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-212ENST00000443561 KIF1AQ12756 1690 aa18.44■□□□□ 0.54
PDLIM2-212ENST00000443561 NUTM2FA1L443 756 aa18.43■□□□□ 0.54
PDLIM2-212ENST00000443561 POGKQ9P215 609 aa18.43■□□□□ 0.54
PDLIM2-212ENST00000443561 SHPRHQ149N8 1683 aa18.43■□□□□ 0.54
PDLIM2-212ENST00000443561 PXDNQ92626 1479 aa18.42■□□□□ 0.54
PDLIM2-212ENST00000443561 ITSN1Q15811 1721 aa18.42■□□□□ 0.54
PDLIM2-212ENST00000443561 ANKARQ7Z5J8 1434 aa18.41■□□□□ 0.54
PDLIM2-212ENST00000443561 CENPJQ9HC77 1338 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-212ENST00000443561 TRPM3Q9HCF6 1732 aaPredicted RBP18.4■□□□□ 0.54
PDLIM2-212ENST00000443561 MED1Q15648 1581 aaPredicted RBP18.39■□□□□ 0.53
PDLIM2-212ENST00000443561 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
PDLIM2-212ENST00000443561 WASLO00401 505 aaPredicted RBP18.38■□□□□ 0.53
PDLIM2-212ENST00000443561 CARD11Q9BXL7 1154 aa18.36■□□□□ 0.53
PDLIM2-212ENST00000443561 LRP6O75581 1613 aa18.35■□□□□ 0.53
PDLIM2-212ENST00000443561 SBNO2Q9Y2G9 1366 aa18.35■□□□□ 0.53
PDLIM2-212ENST00000443561 SOS2Q07890 1332 aaPredicted RBP18.35■□□□□ 0.53
PDLIM2-212ENST00000443561 COL22A1Q8NFW1 1626 aaPredicted RBP18.34■□□□□ 0.53
PDLIM2-212ENST00000443561 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
PDLIM2-212ENST00000443561 CDK19Q9BWU1 502 aa18.33■□□□□ 0.52
PDLIM2-212ENST00000443561 ALS2Q96Q42 1657 aa18.33■□□□□ 0.52
PDLIM2-212ENST00000443561 ABCA3Q99758 1704 aa18.32■□□□□ 0.52
PDLIM2-212ENST00000443561 CRYBG1Q9Y4K1 1723 aa18.32■□□□□ 0.52
PDLIM2-212ENST00000443561 EIF3AQ14152 1382 aaKnown RBP18.31■□□□□ 0.52
PDLIM2-212ENST00000443561 PNPLA6Q8IY17 1366 aa18.31■□□□□ 0.52
PDLIM2-212ENST00000443561 TESK2Q96S53 571 aa18.31■□□□□ 0.52
PDLIM2-212ENST00000443561 USP47Q96K76 1375 aa18.3■□□□□ 0.52
PDLIM2-212ENST00000443561 AKAP12Q02952 1782 aa18.3■□□□□ 0.52
PDLIM2-212ENST00000443561 FOXO3O43524 673 aa18.3■□□□□ 0.52
PDLIM2-212ENST00000443561 XPCQ01831 940 aaPredicted RBP18.3■□□□□ 0.52
PDLIM2-212ENST00000443561 JCADQ9P266 1359 aa18.3■□□□□ 0.52
PDLIM2-212ENST00000443561 NUDT16Q96DE0 195 aaKnown RBP18.29■□□□□ 0.52
PDLIM2-212ENST00000443561 PHF8Q9UPP1 1060 aa18.29■□□□□ 0.52
PDLIM2-212ENST00000443561 PMFBP1Q8TBY8 1022 aa18.28■□□□□ 0.52
PDLIM2-212ENST00000443561 CABP2Q9NPB3 220 aa18.28■□□□□ 0.52
PDLIM2-212ENST00000443561 NRKQ7Z2Y5 1582 aa18.27■□□□□ 0.52
PDLIM2-212ENST00000443561 ST20-MTHFSA0A0A6YYL1 179 aa18.27■□□□□ 0.52
PDLIM2-212ENST00000443561 POLR3AO14802 1390 aaPredicted RBP18.27■□□□□ 0.51
PDLIM2-212ENST00000443561 NPHP3Q7Z494 1330 aa18.26■□□□□ 0.51
PDLIM2-212ENST00000443561 MYOM1P52179 1685 aa18.25■□□□□ 0.51
PDLIM2-212ENST00000443561 MON2Q7Z3U7 1717 aa18.25■□□□□ 0.51
PDLIM2-212ENST00000443561 MARF1Q9Y4F3 1742 aaKnown RBP18.25■□□□□ 0.51
PDLIM2-212ENST00000443561 CD163L1Q9NR16 1453 aa18.25■□□□□ 0.51
PDLIM2-212ENST00000443561 PPIP5K1Q6PFW1 1433 aa18.24■□□□□ 0.51
PDLIM2-212ENST00000443561 TNS3Q68CZ2 1445 aa18.23■□□□□ 0.51
PDLIM2-212ENST00000443561 SPATA31A3Q5VYP0 1347 aa18.23■□□□□ 0.51
PDLIM2-212ENST00000443561 EVC2Q86UK5 1308 aa18.23■□□□□ 0.51
PDLIM2-212ENST00000443561 PLEKHG3A1L390 1219 aa18.22■□□□□ 0.51
PDLIM2-212ENST00000443561 SBNO1A3KN83 1393 aa18.21■□□□□ 0.51
PDLIM2-212ENST00000443561 SRPK2P78362 688 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-212ENST00000443561 KRT28Q7Z3Y7 464 aa18.21■□□□□ 0.51
PDLIM2-212ENST00000443561 LRRC59Q96AG4 307 aaKnown RBP18.21■□□□□ 0.51
PDLIM2-212ENST00000443561 CCDC61Q9Y6R9 512 aa18.21■□□□□ 0.51
PDLIM2-212ENST00000443561 PHRF1Q9P1Y6 1649 aaKnown RBP18.2■□□□□ 0.5
PDLIM2-212ENST00000443561 PIK3C2AO00443 1686 aa18.2■□□□□ 0.5
PDLIM2-212ENST00000443561 SSH2Q76I76 1423 aa18.2■□□□□ 0.5
PDLIM2-212ENST00000443561 ACEP12821 1306 aa18.2■□□□□ 0.5
PDLIM2-212ENST00000443561 CPSF1Q10570 1443 aaKnown RBP18.19■□□□□ 0.5
PDLIM2-212ENST00000443561 SPATA31A6Q5VVP1 1343 aa18.18■□□□□ 0.5
PDLIM2-212ENST00000443561 USP6P35125 1406 aa18.17■□□□□ 0.5
PDLIM2-212ENST00000443561 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
PDLIM2-212ENST00000443561 RGS17Q9UGC6 210 aaPredicted RBP18.17■□□□□ 0.5
PDLIM2-212ENST00000443561 ATAD2Q6PL18 1390 aa18.17■□□□□ 0.5
PDLIM2-212ENST00000443561 HSPA5P11021 654 aaKnown RBP18.15■□□□□ 0.5
PDLIM2-212ENST00000443561 USP54Q70EL1 1684 aa18.15■□□□□ 0.5
PDLIM2-212ENST00000443561 NGDNQ8NEJ9 315 aaKnown RBP18.14■□□□□ 0.49
PDLIM2-212ENST00000443561 PSME1Q06323 249 aa18.13■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms