RNA–Protein interactions for RNA: ENST00000441679.1

EPHA4-208, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 565 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-208ENST00000441679 CLASP1Q7Z460 1538 aa11.55□□□□□ -0.56
EPHA4-208ENST00000441679 SMAPO00193 183 aa11.54□□□□□ -0.56
EPHA4-208ENST00000441679 PROCA1Q8NCQ7 364 aaPredicted RBP11.54□□□□□ -0.56
EPHA4-208ENST00000441679 KIAA1468Q9P260 1216 aa11.54□□□□□ -0.56
EPHA4-208ENST00000441679 ARHGAP33O14559 1287 aa11.53□□□□□ -0.56
EPHA4-208ENST00000441679 VARS2Q5ST30 1063 aaKnown RBP11.53□□□□□ -0.56
EPHA4-208ENST00000441679 NUTM1Q86Y26 1132 aa11.53□□□□□ -0.56
EPHA4-208ENST00000441679 ARHGAP35Q9NRY4 1499 aa11.52□□□□□ -0.56
EPHA4-208ENST00000441679 PSEN2P49810 448 aa11.52□□□□□ -0.57
EPHA4-208ENST00000441679 RSPH4AQ5TD94 716 aa11.52□□□□□ -0.57
EPHA4-208ENST00000441679 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.52□□□□□ -0.57
EPHA4-208ENST00000441679 POTEMA6NI47 508 aa11.51□□□□□ -0.57
EPHA4-208ENST00000441679 RDH13Q8NBN7 331 aa11.51□□□□□ -0.57
EPHA4-208ENST00000441679 SPIRE2Q8WWL2 714 aa11.51□□□□□ -0.57
EPHA4-208ENST00000441679 ARXQ96QS3 562 aa11.51□□□□□ -0.57
EPHA4-208ENST00000441679 RABGEF1Q9UJ41 708 aa11.51□□□□□ -0.57
EPHA4-208ENST00000441679 SHROOM2Q13796 1616 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 PBX2P40425 430 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 POTEGQ6S5H5 508 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 SLC4A5Q9BY07 1137 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 VPS8Q8N3P4 1428 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 DISP1Q96F81 1524 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 SAMD9Q5K651 1589 aa11.5□□□□□ -0.57
EPHA4-208ENST00000441679 EMP3P54852 163 aa11.49□□□□□ -0.57
EPHA4-208ENST00000441679 RIC3Q7Z5B4 369 aa11.49□□□□□ -0.57
EPHA4-208ENST00000441679 HDGFP51858 240 aaKnown RBP11.48□□□□□ -0.57
EPHA4-208ENST00000441679 KIAA0556O60303 1618 aa11.47□□□□□ -0.57
EPHA4-208ENST00000441679 CASKIN1Q8WXD9 1431 aa11.47□□□□□ -0.57
EPHA4-208ENST00000441679 SLC4A3P48751 1232 aa11.47□□□□□ -0.57
EPHA4-208ENST00000441679 MCM6Q14566 821 aa11.47□□□□□ -0.57
EPHA4-208ENST00000441679 UACAQ9BZF9 1416 aa11.46□□□□□ -0.57
EPHA4-208ENST00000441679 TTBK1Q5TCY1 1321 aaPredicted RBP11.46□□□□□ -0.57
EPHA4-208ENST00000441679 PLEKHD1A6NEE1 506 aa11.46□□□□□ -0.57
EPHA4-208ENST00000441679 TUSC1Q2TAM9 212 aa11.46□□□□□ -0.57
EPHA4-208ENST00000441679 LIMD1Q9UGP4 676 aa11.46□□□□□ -0.57
EPHA4-208ENST00000441679 FHOD3Q2V2M9 1422 aa11.45□□□□□ -0.58
EPHA4-208ENST00000441679 SPTLC1O15269 473 aa11.45□□□□□ -0.58
EPHA4-208ENST00000441679 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
EPHA4-208ENST00000441679 AXIN2Q9Y2T1 843 aa11.45□□□□□ -0.58
EPHA4-208ENST00000441679 ARAP1Q96P48 1450 aa11.44□□□□□ -0.58
EPHA4-208ENST00000441679 GJA5P36382 358 aa11.44□□□□□ -0.58
EPHA4-208ENST00000441679 SWT1Q5T5J6 900 aaKnown RBP11.44□□□□□ -0.58
EPHA4-208ENST00000441679 DMRTA1Q5VZB9 504 aa11.44□□□□□ -0.58
EPHA4-208ENST00000441679 RSBN1LQ6PCB5 846 aaPredicted RBP11.44□□□□□ -0.58
EPHA4-208ENST00000441679 KDM4AO75164 1064 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 RFC5P40937 340 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 FAM98CQ17RN3 349 aaKnown RBP11.43□□□□□ -0.58
EPHA4-208ENST00000441679 CYB5RLQ6IPT4 315 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 POTEEQ6S8J3 1075 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 ZNF687Q8N1G0 1237 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 MARVELD3Q96A59 401 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 CCDC18Q5T9S5 1454 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 FYCO1Q9BQS8 1478 aa11.43□□□□□ -0.58
EPHA4-208ENST00000441679 MAP3K1Q13233 1512 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 MOXD2PA6NHM9 499 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 A6NJR5 290 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 USP46P62068 366 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 PPP2R2DQ66LE6 453 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 BANK1Q8NDB2 785 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 NBPF3Q9H094 633 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 UHRF1BP1LA0JNW5 1464 aa11.42□□□□□ -0.58
EPHA4-208ENST00000441679 FAM205CA6NFA0 338 aa11.41□□□□□ -0.58
EPHA4-208ENST00000441679 SPDYE5A6NIY4 337 aa11.41□□□□□ -0.58
EPHA4-208ENST00000441679 GCGRP47871 477 aa11.41□□□□□ -0.58
EPHA4-208ENST00000441679 TMEM259Q4ZIN3 620 aa11.41□□□□□ -0.58
EPHA4-208ENST00000441679 VPS9D1Q9Y2B5 631 aa11.41□□□□□ -0.58
EPHA4-208ENST00000441679 CSPP1Q1MSJ5 1256 aa11.4□□□□□ -0.58
EPHA4-208ENST00000441679 LAPTM4BQ86VI4 370 aa11.4□□□□□ -0.58
EPHA4-208ENST00000441679 HOMEZQ8IX15 550 aa11.4□□□□□ -0.58
EPHA4-208ENST00000441679 ARHGEF11O15085 1522 aa11.4□□□□□ -0.59
EPHA4-208ENST00000441679 RAD21O60216 631 aa11.39□□□□□ -0.59
EPHA4-208ENST00000441679 NDUFV2P19404 249 aa11.39□□□□□ -0.59
EPHA4-208ENST00000441679 SLF2Q8IX21 1173 aa11.39□□□□□ -0.59
EPHA4-208ENST00000441679 CLUAP1Q96AJ1 413 aa11.39□□□□□ -0.59
EPHA4-208ENST00000441679 HECW1Q76N89 1606 aa11.37□□□□□ -0.59
EPHA4-208ENST00000441679 RAPGEF6Q8TEU7 1601 aa11.36□□□□□ -0.59
EPHA4-208ENST00000441679 NUTM2BA6NNL0 878 aaPredicted RBP11.36□□□□□ -0.59
EPHA4-208ENST00000441679 NUTM2EB1AL46 878 aaPredicted RBP11.36□□□□□ -0.59
EPHA4-208ENST00000441679 HOXA2O43364 376 aa11.36□□□□□ -0.59
EPHA4-208ENST00000441679 SLC10A3P09131 477 aa11.36□□□□□ -0.59
EPHA4-208ENST00000441679 NUTM2DQ5VT03 806 aaPredicted RBP11.36□□□□□ -0.59
EPHA4-208ENST00000441679 NUTM2AQ8IVF1 878 aaPredicted RBP11.36□□□□□ -0.59
EPHA4-208ENST00000441679 MTUS2Q5JR59 1369 aa11.36□□□□□ -0.59
EPHA4-208ENST00000441679 TK2O00142 265 aa11.35□□□□□ -0.59
EPHA4-208ENST00000441679 LILRB3O75022 631 aa11.35□□□□□ -0.59
EPHA4-208ENST00000441679 QPCTQ16769 361 aa11.35□□□□□ -0.59
EPHA4-208ENST00000441679 PRPF38BQ5VTL8 546 aaKnown RBP11.35□□□□□ -0.59
EPHA4-208ENST00000441679 SAMD7Q7Z3H4 446 aa11.35□□□□□ -0.59
EPHA4-208ENST00000441679 PLB1Q6P1J6 1458 aa11.35□□□□□ -0.59
EPHA4-208ENST00000441679 ABCC2Q92887 1545 aa11.35□□□□□ -0.59
EPHA4-208ENST00000441679 ABCA8O94911 1581 aa11.34□□□□□ -0.59
EPHA4-208ENST00000441679 FDX1P10109 184 aa11.34□□□□□ -0.59
EPHA4-208ENST00000441679 GRIPAP1Q4V328 841 aa11.34□□□□□ -0.59
EPHA4-208ENST00000441679 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
EPHA4-208ENST00000441679 ZBTB3Q9H5J0 574 aa11.34□□□□□ -0.59
EPHA4-208ENST00000441679 EPRSP07814 1512 aaKnown RBP11.34□□□□□ -0.59
EPHA4-208ENST00000441679 TRAK2O60296 914 aa11.33□□□□□ -0.6
EPHA4-208ENST00000441679 RNF40O75150 1001 aa11.33□□□□□ -0.6
EPHA4-208ENST00000441679 FBXO31Q5XUX0 539 aaPredicted RBP11.33□□□□□ -0.6
EPHA4-208ENST00000441679 PROSER2Q86WR7 435 aaPredicted RBP11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms