RNA–Protein interactions for RNA: ENST00000441439.6

LMO3-208, Transcript of LIM domain only 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMO3, Length 3,515 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-208ENST00000441439 GOLGA6L3A6NEY3 463 aa10.09□□□□□ -0.79
LMO3-208ENST00000441439 TPM2P07951 284 aa10.09□□□□□ -0.79
LMO3-208ENST00000441439 NCBP3Q53F19 620 aaKnown RBP10.09□□□□□ -0.79
LMO3-208ENST00000441439 ABCC3O15438 1527 aa10.09□□□□□ -0.79
LMO3-208ENST00000441439 PNNQ9H307 717 aaKnown RBP10.09□□□□□ -0.79
LMO3-208ENST00000441439 PREX1Q8TCU6 1659 aa10.09□□□□□ -0.79
LMO3-208ENST00000441439 HSP90AA1P07900 732 aaKnown RBP10.08□□□□□ -0.8
LMO3-208ENST00000441439 ARHGEF28Q8N1W1 1705 aaKnown RBP10.08□□□□□ -0.8
LMO3-208ENST00000441439 KANK1Q14678 1352 aa10.08□□□□□ -0.8
LMO3-208ENST00000441439 ADGRB1O14514 1584 aa10.08□□□□□ -0.8
LMO3-208ENST00000441439 PLEKHD1A6NEE1 506 aa10.08□□□□□ -0.8
LMO3-208ENST00000441439 HSP90AA2PQ14568 343 aaPredicted RBP10.08□□□□□ -0.8
LMO3-208ENST00000441439 ZMYND15Q9H091 742 aa10.08□□□□□ -0.8
LMO3-208ENST00000441439 IQSEC2Q5JU85 1478 aa10.07□□□□□ -0.8
LMO3-208ENST00000441439 CFDP1Q9UEE9 299 aaPredicted RBP10.07□□□□□ -0.8
LMO3-208ENST00000441439 ADAMTS8Q9UP79 889 aa10.07□□□□□ -0.8
LMO3-208ENST00000441439 MCM4P33991 863 aa10.07□□□□□ -0.8
LMO3-208ENST00000441439 DDIT3P35638 169 aa10.07□□□□□ -0.8
LMO3-208ENST00000441439 ASXL2Q76L83 1435 aa10.06□□□□□ -0.8
LMO3-208ENST00000441439 RIMBP3CA6NJZ7 1639 aa10.06□□□□□ -0.8
LMO3-208ENST00000441439 RIMBP3BA6NNM3 1639 aa10.06□□□□□ -0.8
LMO3-208ENST00000441439 RIMBP3Q9UFD9 1639 aa10.06□□□□□ -0.8
LMO3-208ENST00000441439 PPP2R1AP30153 589 aa10.06□□□□□ -0.8
LMO3-208ENST00000441439 E9PSI1 815 aa10.06□□□□□ -0.8
LMO3-208ENST00000441439 AMER1Q5JTC6 1135 aaPredicted RBP10.06□□□□□ -0.8
LMO3-208ENST00000441439 RIMS1Q86UR5 1692 aaKnown RBP10.05□□□□□ -0.8
LMO3-208ENST00000441439 TMEM131LA2VDJ0 1609 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 IBTKQ9P2D0 1353 aaPredicted RBP10.05□□□□□ -0.8
LMO3-208ENST00000441439 TMF1P82094 1093 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 POLR3GLQ9BT43 218 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 PTMSP20962 102 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 PANK3Q9H999 370 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 ZFYVE9O95405 1425 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 NOS1P29475 1434 aa10.05□□□□□ -0.8
LMO3-208ENST00000441439 IGHDP01880 384 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 TBC1D2Q9BYX2 928 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 PDCL3Q9H2J4 239 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 PMFBP1Q8TBY8 1022 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 CLUAP1Q96AJ1 413 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 CHMP5Q9NZZ3 219 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 NEXMIFQ5QGS0 1516 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 SBNO2Q9Y2G9 1366 aa10.04□□□□□ -0.8
LMO3-208ENST00000441439 DDX11L8A8MPP1 907 aa10.03□□□□□ -0.8
LMO3-208ENST00000441439 ZNF326Q5BKZ1 582 aaKnown RBP10.03□□□□□ -0.8
LMO3-208ENST00000441439 ZNF692Q9BU19 519 aaPredicted RBP10.03□□□□□ -0.8
LMO3-208ENST00000441439 SEC24BO95487 1268 aa10.03□□□□□ -0.8
LMO3-208ENST00000441439 ADGRB2O60241 1585 aa10.03□□□□□ -0.8
LMO3-208ENST00000441439 USP54Q70EL1 1684 aa10.02□□□□□ -0.8
LMO3-208ENST00000441439 SCAF11Q99590 1463 aaKnown RBP10.02□□□□□ -0.8
LMO3-208ENST00000441439 CALD1Q05682 793 aaKnown RBP10.02□□□□□ -0.8
LMO3-208ENST00000441439 ADGRL1O94910 1474 aa10.02□□□□□ -0.81
LMO3-208ENST00000441439 YEATS2Q9ULM3 1422 aa10.02□□□□□ -0.81
LMO3-208ENST00000441439 ESPNB1AK53 854 aa10.02□□□□□ -0.81
LMO3-208ENST00000441439 QRICH2Q9H0J4 1663 aa10.02□□□□□ -0.81
LMO3-208ENST00000441439 CIZ1Q9ULV3 898 aaPredicted RBP10.02□□□□□ -0.81
LMO3-208ENST00000441439 POLR3AO14802 1390 aaPredicted RBP10.01□□□□□ -0.81
LMO3-208ENST00000441439 PHF23Q9BUL5 403 aaPredicted RBP10.01□□□□□ -0.81
LMO3-208ENST00000441439 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
LMO3-208ENST00000441439 WDR43Q15061 677 aaKnown RBP eCLIP10.01□□□□□ -0.81
LMO3-208ENST00000441439 GRPEL1Q9HAV7 217 aa10.01□□□□□ -0.81
LMO3-208ENST00000441439 SPATA31D1Q6ZQQ2 1576 aa10.01□□□□□ -0.81
LMO3-208ENST00000441439 RGS3P49796 1198 aa10□□□□□ -0.81
LMO3-208ENST00000441439 CLEC17AQ6ZS10 378 aa10□□□□□ -0.81
LMO3-208ENST00000441439 VSIG10Q8N0Z9 540 aa10□□□□□ -0.81
LMO3-208ENST00000441439 NAP1L5Q96NT1 182 aaPredicted RBP10□□□□□ -0.81
LMO3-208ENST00000441439 PPP1R9BQ96SB3 815 aa10□□□□□ -0.81
LMO3-208ENST00000441439 MYO5BQ9ULV0 1848 aa10□□□□□ -0.81
LMO3-208ENST00000441439 CDCA8Q53HL2 280 aa10□□□□□ -0.81
LMO3-208ENST00000441439 SNX21Q969T3 373 aa10□□□□□ -0.81
LMO3-208ENST00000441439 TRAK2O60296 914 aa10□□□□□ -0.81
LMO3-208ENST00000441439 SENP3-EIF4A1A0A087X0R7 540 aa9.99□□□□□ -0.81
LMO3-208ENST00000441439 CC2D1BQ5T0F9 858 aaKnown RBP9.99□□□□□ -0.81
LMO3-208ENST00000441439 MAP7D2Q96T17 732 aa9.99□□□□□ -0.81
LMO3-208ENST00000441439 ARHGEF40Q8TER5 1519 aa9.99□□□□□ -0.81
LMO3-208ENST00000441439 SKOR2Q2VWA4 1001 aaPredicted RBP9.99□□□□□ -0.81
LMO3-208ENST00000441439 NBPF1Q3BBV0 1214 aa9.99□□□□□ -0.81
LMO3-208ENST00000441439 HS1BP3Q53T59 392 aa9.99□□□□□ -0.81
LMO3-208ENST00000441439 SLC24A1O60721 1099 aa9.98□□□□□ -0.81
LMO3-208ENST00000441439 PANK2Q9BZ23 570 aa9.98□□□□□ -0.81
LMO3-208ENST00000441439 MYH16Q9H6N6 1097 aa9.98□□□□□ -0.81
LMO3-208ENST00000441439 ERBB4Q15303 1308 aa9.98□□□□□ -0.81
LMO3-208ENST00000441439 SMC5Q8IY18 1101 aa9.97□□□□□ -0.81
LMO3-208ENST00000441439 NRXN3Q9Y4C0 1643 aa9.97□□□□□ -0.81
LMO3-208ENST00000441439 RBM25P49756 843 aaKnown RBP9.96□□□□□ -0.81
LMO3-208ENST00000441439 CCDC27Q2M243 656 aa9.96□□□□□ -0.81
LMO3-208ENST00000441439 SPINK5Q9NQ38 1064 aaPredicted RBP9.96□□□□□ -0.81
LMO3-208ENST00000441439 DLC1Q96QB1 1528 aa9.96□□□□□ -0.82
LMO3-208ENST00000441439 CCDC173Q0VFZ6 552 aa9.96□□□□□ -0.82
LMO3-208ENST00000441439 CNGB1Q14028 1251 aaPredicted RBP9.96□□□□□ -0.82
LMO3-208ENST00000441439 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.82
LMO3-208ENST00000441439 OFD1O75665 1012 aa9.95□□□□□ -0.82
LMO3-208ENST00000441439 BCAR3O75815 825 aa9.95□□□□□ -0.82
LMO3-208ENST00000441439 KNSTRNQ9Y448 316 aa9.95□□□□□ -0.82
LMO3-208ENST00000441439 KDM2AQ9Y2K7 1162 aa9.95□□□□□ -0.82
LMO3-208ENST00000441439 CT47B1P0C2W7 299 aaPredicted RBP9.94□□□□□ -0.82
LMO3-208ENST00000441439 TSPY4P0CV99 314 aa9.94□□□□□ -0.82
LMO3-208ENST00000441439 TSPY10P0CW01 314 aa9.94□□□□□ -0.82
LMO3-208ENST00000441439 PRDM4Q9UKN5 801 aa9.94□□□□□ -0.82
LMO3-208ENST00000441439 WDR63Q8IWG1 891 aa9.94□□□□□ -0.82
LMO3-208ENST00000441439 ERVK-7P63135 1459 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms