RNA–Protein interactions for RNA: ENST00000440978.1

EBF3-203, Transcript of early B cell factor 3, humanhuman

TSL 3

Gene EBF3, Length 817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-203ENST00000440978 TOM1O60784 492 aa16.99■□□□□ 0.31
EBF3-203ENST00000440978 NALCNQ8IZF0 1738 aa16.99■□□□□ 0.31
EBF3-203ENST00000440978 WAPLQ7Z5K2 1190 aa16.98■□□□□ 0.31
EBF3-203ENST00000440978 PRAM1Q96QH2 718 aa16.98■□□□□ 0.31
EBF3-203ENST00000440978 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.98■□□□□ 0.31
EBF3-203ENST00000440978 POGKQ9P215 609 aa16.97■□□□□ 0.31
EBF3-203ENST00000440978 UBAP1LF5GYI3 381 aa16.96■□□□□ 0.31
EBF3-203ENST00000440978 ATF3P18847 181 aa16.96■□□□□ 0.31
EBF3-203ENST00000440978 CADPS2Q86UW7 1296 aa16.96■□□□□ 0.31
EBF3-203ENST00000440978 CARD11Q9BXL7 1154 aa16.96■□□□□ 0.31
EBF3-203ENST00000440978 EIF3AQ14152 1382 aaKnown RBP16.96■□□□□ 0.31
EBF3-203ENST00000440978 PLEKHH1Q9ULM0 1364 aa16.96■□□□□ 0.31
EBF3-203ENST00000440978 CDC42BPGQ6DT37 1551 aa16.96■□□□□ 0.31
EBF3-203ENST00000440978 FBXO41Q8TF61 875 aa16.95■□□□□ 0.3
EBF3-203ENST00000440978 ADGRB2O60241 1585 aa16.94■□□□□ 0.3
EBF3-203ENST00000440978 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
EBF3-203ENST00000440978 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
EBF3-203ENST00000440978 SLAIN2Q9P270 581 aa16.9■□□□□ 0.3
EBF3-203ENST00000440978 MST1RQ04912 1400 aa16.89■□□□□ 0.29
EBF3-203ENST00000440978 QRICH2Q9H0J4 1663 aa16.88■□□□□ 0.29
EBF3-203ENST00000440978 FMN2Q9NZ56 1722 aa16.88■□□□□ 0.29
EBF3-203ENST00000440978 MINK1Q8N4C8 1332 aaPredicted RBP16.88■□□□□ 0.29
EBF3-203ENST00000440978 SBNO2Q9Y2G9 1366 aa16.87■□□□□ 0.29
EBF3-203ENST00000440978 PIP4K2BP78356 416 aa16.86■□□□□ 0.29
EBF3-203ENST00000440978 C1orf167Q5SNV9 1468 aa16.86■□□□□ 0.29
EBF3-203ENST00000440978 WASLO00401 505 aaPredicted RBP16.85■□□□□ 0.29
EBF3-203ENST00000440978 SLC24A1O60721 1099 aa16.85■□□□□ 0.29
EBF3-203ENST00000440978 SCAF1Q9H7N4 1312 aaKnown RBP16.85■□□□□ 0.29
EBF3-203ENST00000440978 USP47Q96K76 1375 aa16.85■□□□□ 0.29
EBF3-203ENST00000440978 ANKARQ7Z5J8 1434 aa16.85■□□□□ 0.29
EBF3-203ENST00000440978 ROBO1Q9Y6N7 1651 aa16.85■□□□□ 0.29
EBF3-203ENST00000440978 HIRIP3Q9BW71 556 aaPredicted RBP16.84■□□□□ 0.29
EBF3-203ENST00000440978 TULP4Q9NRJ4 1543 aa16.83■□□□□ 0.28
EBF3-203ENST00000440978 EVC2Q86UK5 1308 aa16.81■□□□□ 0.28
EBF3-203ENST00000440978 BRINP3Q76B58 766 aa16.81■□□□□ 0.28
EBF3-203ENST00000440978 ST20-MTHFSA0A0A6YYL1 179 aa16.8■□□□□ 0.28
EBF3-203ENST00000440978 CDK19Q9BWU1 502 aa16.8■□□□□ 0.28
EBF3-203ENST00000440978 USP32Q8NFA0 1604 aa16.79■□□□□ 0.28
EBF3-203ENST00000440978 KIF1AQ12756 1690 aa16.78■□□□□ 0.28
EBF3-203ENST00000440978 NUTM2FA1L443 756 aa16.78■□□□□ 0.28
EBF3-203ENST00000440978 EIF4G2P78344 907 aaKnown RBP eCLIP16.78■□□□□ 0.28
EBF3-203ENST00000440978 ESCO1Q5FWF5 840 aa16.78■□□□□ 0.28
EBF3-203ENST00000440978 ITSN1Q15811 1721 aa16.78■□□□□ 0.28
EBF3-203ENST00000440978 ATP7BP35670 1465 aa16.78■□□□□ 0.28
EBF3-203ENST00000440978 AHDC1Q5TGY3 1603 aaPredicted RBP16.78■□□□□ 0.28
EBF3-203ENST00000440978 ZEB1P37275 1124 aaPredicted RBP16.77■□□□□ 0.28
EBF3-203ENST00000440978 SRPK2P78362 688 aaKnown RBP16.77■□□□□ 0.28
EBF3-203ENST00000440978 TESK2Q96S53 571 aa16.77■□□□□ 0.28
EBF3-203ENST00000440978 ORAI2Q96SN7 254 aa16.77■□□□□ 0.28
EBF3-203ENST00000440978 ILDR1Q86SU0 546 aaPredicted RBP16.76■□□□□ 0.27
EBF3-203ENST00000440978 NUDT16Q96DE0 195 aaKnown RBP16.76■□□□□ 0.27
EBF3-203ENST00000440978 NHSL1Q5SYE7 1610 aa16.76■□□□□ 0.27
EBF3-203ENST00000440978 PRR36Q9H6K5 1346 aa16.75■□□□□ 0.27
EBF3-203ENST00000440978 RGPD8O14715 1765 aaPredicted RBP16.75■□□□□ 0.27
EBF3-203ENST00000440978 PUS7Q96PZ0 661 aaKnown RBP16.75■□□□□ 0.27
EBF3-203ENST00000440978 TOPAZ1Q8N9V7 1692 aa16.75■□□□□ 0.27
EBF3-203ENST00000440978 PHF8Q9UPP1 1060 aa16.74■□□□□ 0.27
EBF3-203ENST00000440978 CCDC61Q9Y6R9 512 aa16.74■□□□□ 0.27
EBF3-203ENST00000440978 PHLPP1O60346 1717 aa16.73■□□□□ 0.27
EBF3-203ENST00000440978 HSPA1LP34931 641 aa16.73■□□□□ 0.27
EBF3-203ENST00000440978 TMF1P82094 1093 aa16.73■□□□□ 0.27
EBF3-203ENST00000440978 CABP2Q9NPB3 220 aa16.73■□□□□ 0.27
EBF3-203ENST00000440978 ATAD2Q6PL18 1390 aa16.73■□□□□ 0.27
EBF3-203ENST00000440978 NPHP3Q7Z494 1330 aa16.72■□□□□ 0.27
EBF3-203ENST00000440978 HSPA5P11021 654 aaKnown RBP16.72■□□□□ 0.27
EBF3-203ENST00000440978 CDCA8Q53HL2 280 aa16.71■□□□□ 0.27
EBF3-203ENST00000440978 COL16A1Q07092 1604 aaPredicted RBP16.7■□□□□ 0.26
EBF3-203ENST00000440978 PLEKHG3A1L390 1219 aa16.7■□□□□ 0.26
EBF3-203ENST00000440978 PPIP5K1Q6PFW1 1433 aa16.7■□□□□ 0.26
EBF3-203ENST00000440978 SOS2Q07890 1332 aaPredicted RBP16.7■□□□□ 0.26
EBF3-203ENST00000440978 FOXO3O43524 673 aa16.69■□□□□ 0.26
EBF3-203ENST00000440978 PXDNQ92626 1479 aa16.68■□□□□ 0.26
EBF3-203ENST00000440978 POLR3AO14802 1390 aaPredicted RBP16.68■□□□□ 0.26
EBF3-203ENST00000440978 DISP3Q9P2K9 1392 aa16.68■□□□□ 0.26
EBF3-203ENST00000440978 PMFBP1Q8TBY8 1022 aa16.68■□□□□ 0.26
EBF3-203ENST00000440978 NINLQ9Y2I6 1382 aa16.67■□□□□ 0.26
EBF3-203ENST00000440978 NGDNQ8NEJ9 315 aaKnown RBP16.67■□□□□ 0.26
EBF3-203ENST00000440978 LRRC59Q96AG4 307 aaKnown RBP16.67■□□□□ 0.26
EBF3-203ENST00000440978 PSME1Q06323 249 aa16.66■□□□□ 0.26
EBF3-203ENST00000440978 DDX17Q92841 729 aaKnown RBP16.66■□□□□ 0.26
EBF3-203ENST00000440978 KRT28Q7Z3Y7 464 aa16.65■□□□□ 0.26
EBF3-203ENST00000440978 CABP1Q9NZU7 370 aa16.65■□□□□ 0.26
EBF3-203ENST00000440978 ACEP12821 1306 aa16.65■□□□□ 0.26
EBF3-203ENST00000440978 BRD4O60885 1362 aaPredicted RBP16.64■□□□□ 0.26
EBF3-203ENST00000440978 JCADQ9P266 1359 aa16.64■□□□□ 0.26
EBF3-203ENST00000440978 SBNO1A3KN83 1393 aa16.64■□□□□ 0.25
EBF3-203ENST00000440978 SHPRHQ149N8 1683 aa16.63■□□□□ 0.25
EBF3-203ENST00000440978 ZNF692Q9BU19 519 aaPredicted RBP16.62■□□□□ 0.25
EBF3-203ENST00000440978 XPCQ01831 940 aaPredicted RBP16.61■□□□□ 0.25
EBF3-203ENST00000440978 TMC1Q8TDI8 760 aa16.61■□□□□ 0.25
EBF3-203ENST00000440978 TRPM3Q9HCF6 1732 aaPredicted RBP16.61■□□□□ 0.25
EBF3-203ENST00000440978 CPSF1Q10570 1443 aaKnown RBP16.61■□□□□ 0.25
EBF3-203ENST00000440978 TNS3Q68CZ2 1445 aa16.61■□□□□ 0.25
EBF3-203ENST00000440978 AKAP12Q02952 1782 aa16.6■□□□□ 0.25
EBF3-203ENST00000440978 TERF2IPQ9NYB0 399 aa16.6■□□□□ 0.25
EBF3-203ENST00000440978 SPATA31A3Q5VYP0 1347 aa16.6■□□□□ 0.25
EBF3-203ENST00000440978 USP6P35125 1406 aa16.6■□□□□ 0.25
EBF3-203ENST00000440978 HDGFL2Q7Z4V5 671 aaPredicted RBP16.59■□□□□ 0.25
EBF3-203ENST00000440978 ARHGEF10O15013 1369 aa16.59■□□□□ 0.25
EBF3-203ENST00000440978 PNPLA6Q8IY17 1366 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms