RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 UPF1Q92900 1129 aaKnown RBP eCLIP8.98□□□□□ -0.97
PTPRR-204ENST00000440835 NGLY1Q96IV0 654 aa8.98□□□□□ -0.97
PTPRR-204ENST00000440835 AFF2P51816 1311 aa8.97□□□□□ -0.97
PTPRR-204ENST00000440835 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.97□□□□□ -0.97
PTPRR-204ENST00000440835 SIRT1Q96EB6 747 aa8.97□□□□□ -0.97
PTPRR-204ENST00000440835 NPHP3Q7Z494 1330 aa8.96□□□□□ -0.98
PTPRR-204ENST00000440835 ITGAEP38570 1179 aa8.95□□□□□ -0.98
PTPRR-204ENST00000440835 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
PTPRR-204ENST00000440835 ABCC11Q96J66 1382 aa8.95□□□□□ -0.98
PTPRR-204ENST00000440835 ATAD2Q6PL18 1390 aa8.94□□□□□ -0.98
PTPRR-204ENST00000440835 FNBP4Q8N3X1 1017 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-204ENST00000440835 SLC4A1APQ9BWU0 796 aaKnown RBP8.94□□□□□ -0.98
PTPRR-204ENST00000440835 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
PTPRR-204ENST00000440835 FMN2Q9NZ56 1722 aa8.94□□□□□ -0.98
PTPRR-204ENST00000440835 MYOM2P54296 1465 aa8.94□□□□□ -0.98
PTPRR-204ENST00000440835 SPATA31E1Q6ZUB1 1445 aa8.94□□□□□ -0.98
PTPRR-204ENST00000440835 CCDC125Q86Z20 511 aa8.94□□□□□ -0.98
PTPRR-204ENST00000440835 QTRT2Q9H974 415 aaKnown RBP8.94□□□□□ -0.98
PTPRR-204ENST00000440835 TRPC5Q9UL62 973 aaPredicted RBP8.94□□□□□ -0.98
PTPRR-204ENST00000440835 PXDNQ92626 1479 aa8.93□□□□□ -0.98
PTPRR-204ENST00000440835 RGS12O14924 1447 aa8.93□□□□□ -0.98
PTPRR-204ENST00000440835 ATRNO75882 1429 aa8.93□□□□□ -0.98
PTPRR-204ENST00000440835 NUTM2BA6NNL0 878 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-204ENST00000440835 NUTM2EB1AL46 878 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-204ENST00000440835 NUTM2AQ8IVF1 878 aaPredicted RBP8.93□□□□□ -0.98
PTPRR-204ENST00000440835 TRIM52Q96A61 297 aa8.93□□□□□ -0.98
PTPRR-204ENST00000440835 PIK3C2GO75747 1445 aa8.92□□□□□ -0.98
PTPRR-204ENST00000440835 NRXN1Q9ULB1 1477 aa8.91□□□□□ -0.98
PTPRR-204ENST00000440835 STAC3Q96MF2 364 aa8.91□□□□□ -0.98
PTPRR-204ENST00000440835 C8orf37Q96NL8 207 aa8.91□□□□□ -0.98
PTPRR-204ENST00000440835 DLC1Q96QB1 1528 aa8.91□□□□□ -0.98
PTPRR-204ENST00000440835 NWD2Q9ULI1 1742 aa8.9□□□□□ -0.98
PTPRR-204ENST00000440835 USP21Q9UK80 565 aa8.9□□□□□ -0.98
PTPRR-204ENST00000440835 EIF3AQ14152 1382 aaKnown RBP8.89□□□□□ -0.99
PTPRR-204ENST00000440835 ADGRB2O60241 1585 aa8.89□□□□□ -0.99
PTPRR-204ENST00000440835 ANKARQ7Z5J8 1434 aa8.88□□□□□ -0.99
PTPRR-204ENST00000440835 YTHDC2Q9H6S0 1430 aaKnown RBP8.88□□□□□ -0.99
PTPRR-204ENST00000440835 ORAI2Q96SN7 254 aa8.88□□□□□ -0.99
PTPRR-204ENST00000440835 SBNO1A3KN83 1393 aa8.88□□□□□ -0.99
PTPRR-204ENST00000440835 PSME1Q06323 249 aa8.88□□□□□ -0.99
PTPRR-204ENST00000440835 DHX57Q6P158 1386 aaKnown RBP8.88□□□□□ -0.99
PTPRR-204ENST00000440835 MPHOSPH9Q99550 1183 aa8.87□□□□□ -0.99
PTPRR-204ENST00000440835 SLIT2O94813 1529 aa8.87□□□□□ -0.99
PTPRR-204ENST00000440835 USP32Q8NFA0 1604 aa8.87□□□□□ -0.99
PTPRR-204ENST00000440835 ESCO1Q5FWF5 840 aa8.87□□□□□ -0.99
PTPRR-204ENST00000440835 C14orf93Q9H972 538 aaKnown RBP8.87□□□□□ -0.99
PTPRR-204ENST00000440835 ARHGEF10O15013 1369 aa8.87□□□□□ -0.99
PTPRR-204ENST00000440835 BCL9LQ86UU0 1499 aa8.87□□□□□ -0.99
PTPRR-204ENST00000440835 SPATA31A3Q5VYP0 1347 aa8.86□□□□□ -0.99
PTPRR-204ENST00000440835 ADGRF5Q8IZF2 1346 aa8.86□□□□□ -0.99
PTPRR-204ENST00000440835 ADAMTS2O95450 1211 aa8.86□□□□□ -0.99
PTPRR-204ENST00000440835 TNS3Q68CZ2 1445 aa8.85□□□□□ -0.99
PTPRR-204ENST00000440835 ABCA3Q99758 1704 aa8.85□□□□□ -0.99
PTPRR-204ENST00000440835 DDX17Q92841 729 aaKnown RBP8.85□□□□□ -0.99
PTPRR-204ENST00000440835 UNC5CLQ8IV45 518 aa8.84□□□□□ -0.99
PTPRR-204ENST00000440835 GJD4Q96KN9 370 aaPredicted RBP8.84□□□□□ -0.99
PTPRR-204ENST00000440835 PLCH1Q4KWH8 1693 aa8.83□□□□□ -1
PTPRR-204ENST00000440835 ZRANB1Q9UGI0 708 aa8.83□□□□□ -1
PTPRR-204ENST00000440835 ITSN1Q15811 1721 aa8.83□□□□□ -1
PTPRR-204ENST00000440835 BLMP54132 1417 aaPredicted RBP8.83□□□□□ -1
PTPRR-204ENST00000440835 GLI3P10071 1580 aa8.82□□□□□ -1
PTPRR-204ENST00000440835 KRT28Q7Z3Y7 464 aa8.82□□□□□ -1
PTPRR-204ENST00000440835 COL14A1Q05707 1796 aaKnown RBP8.82□□□□□ -1
PTPRR-204ENST00000440835 RALGAPBQ86X10 1494 aa8.82□□□□□ -1
PTPRR-204ENST00000440835 FOXO3O43524 673 aa8.82□□□□□ -1
PTPRR-204ENST00000440835 VPS72Q15906 364 aa8.82□□□□□ -1
PTPRR-204ENST00000440835 PHF8Q9UPP1 1060 aa8.82□□□□□ -1
PTPRR-204ENST00000440835 RGPD8O14715 1765 aaPredicted RBP8.82□□□□□ -1
PTPRR-204ENST00000440835 TRPM3Q9HCF6 1732 aaPredicted RBP8.82□□□□□ -1
PTPRR-204ENST00000440835 ONECUT3O60422 494 aaPredicted RBP8.81□□□□□ -1
PTPRR-204ENST00000440835 ALS2Q96Q42 1657 aa8.81□□□□□ -1
PTPRR-204ENST00000440835 ADGRB1O14514 1584 aa8.81□□□□□ -1
PTPRR-204ENST00000440835 TULP4Q9NRJ4 1543 aa8.81□□□□□ -1
PTPRR-204ENST00000440835 KIAA1210Q9ULL0 1709 aa8.81□□□□□ -1
PTPRR-204ENST00000440835 WAPLQ7Z5K2 1190 aa8.81□□□□□ -1
PTPRR-204ENST00000440835 NRAPQ86VF7 1730 aa8.8□□□□□ -1
PTPRR-204ENST00000440835 PLEKHH1Q9ULM0 1364 aa8.8□□□□□ -1
PTPRR-204ENST00000440835 RGL3Q3MIN7 710 aa8.8□□□□□ -1
PTPRR-204ENST00000440835 STK26Q9P289 416 aa8.8□□□□□ -1
PTPRR-204ENST00000440835 LRP5O75197 1615 aa8.8□□□□□ -1
PTPRR-204ENST00000440835 BRWD3Q6RI45 1802 aa8.79□□□□□ -1
PTPRR-204ENST00000440835 GPRASP1Q5JY77 1395 aa8.79□□□□□ -1
PTPRR-204ENST00000440835 RGPD1P0DJD0 1748 aa8.79□□□□□ -1
PTPRR-204ENST00000440835 CRYBG1Q9Y4K1 1723 aa8.79□□□□□ -1
PTPRR-204ENST00000440835 NCBP3Q53F19 620 aaKnown RBP8.78□□□□□ -1
PTPRR-204ENST00000440835 TMEM132EQ6IEE7 984 aa8.78□□□□□ -1
PTPRR-204ENST00000440835 ATP7BP35670 1465 aa8.78□□□□□ -1
PTPRR-204ENST00000440835 SF3B2Q13435 895 aaKnown RBP8.77□□□□□ -1
PTPRR-204ENST00000440835 POGKQ9P215 609 aa8.77□□□□□ -1
PTPRR-204ENST00000440835 BRD4O60885 1362 aaPredicted RBP8.77□□□□□ -1.01
PTPRR-204ENST00000440835 HAP1P54257 671 aaPredicted RBP8.77□□□□□ -1.01
PTPRR-204ENST00000440835 PRAM1Q96QH2 718 aa8.76□□□□□ -1.01
PTPRR-204ENST00000440835 CFAP70Q5T0N1 1121 aa8.76□□□□□ -1.01
PTPRR-204ENST00000440835 ARHGEF28Q8N1W1 1705 aaKnown RBP8.76□□□□□ -1.01
PTPRR-204ENST00000440835 DISP2A7MBM2 1401 aa8.75□□□□□ -1.01
PTPRR-204ENST00000440835 THSD7AQ9UPZ6 1657 aa8.75□□□□□ -1.01
PTPRR-204ENST00000440835 C11orf95C9JLR9 678 aaPredicted RBP8.75□□□□□ -1.01
PTPRR-204ENST00000440835 SEPT12Q8IYM1 358 aa8.75□□□□□ -1.01
PTPRR-204ENST00000440835 TOPAZ1Q8N9V7 1692 aa8.75□□□□□ -1.01
PTPRR-204ENST00000440835 RAB3GAP2Q9H2M9 1393 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 169 ms