RNA–Protein interactions for RNA: ENST00000440125.5

STRC-203, Transcript of stereocilin, humanhuman

TSL 1 (best)

Gene STRC, Length 4,291 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-203ENST00000440125 C1orf115Q9H7X2 142 aa13.91□□□□□ -0.18
STRC-203ENST00000440125 CHAF1AQ13111 956 aaPredicted RBP13.91□□□□□ -0.18
STRC-203ENST00000440125 NOB1Q9ULX3 412 aaKnown RBP13.91□□□□□ -0.18
STRC-203ENST00000440125 DRC7Q8IY82 874 aa13.9□□□□□ -0.18
STRC-203ENST00000440125 MVPQ14764 893 aaKnown RBP13.9□□□□□ -0.18
STRC-203ENST00000440125 FAM43AQ8N2R8 423 aa13.9□□□□□ -0.18
STRC-203ENST00000440125 HDGFP51858 240 aaKnown RBP13.9□□□□□ -0.18
STRC-203ENST00000440125 IGHDP01880 384 aa13.9□□□□□ -0.19
STRC-203ENST00000440125 WDR63Q8IWG1 891 aa13.9□□□□□ -0.19
STRC-203ENST00000440125 API5Q9BZZ5 524 aaKnown RBP13.89□□□□□ -0.19
STRC-203ENST00000440125 MCM4P33991 863 aa13.89□□□□□ -0.19
STRC-203ENST00000440125 MCTP1Q6DN14 999 aa13.89□□□□□ -0.19
STRC-203ENST00000440125 COG3Q96JB2 828 aa13.88□□□□□ -0.19
STRC-203ENST00000440125 RAPGEF6Q8TEU7 1601 aa13.88□□□□□ -0.19
STRC-203ENST00000440125 RARSP54136 660 aaKnown RBP13.88□□□□□ -0.19
STRC-203ENST00000440125 ATF7IPQ6VMQ6 1270 aa13.87□□□□□ -0.19
STRC-203ENST00000440125 GPATCH8Q9UKJ3 1502 aaKnown RBP13.87□□□□□ -0.19
STRC-203ENST00000440125 PRKAR2BP31323 418 aa13.87□□□□□ -0.19
STRC-203ENST00000440125 GNAI1P63096 354 aa13.87□□□□□ -0.19
STRC-203ENST00000440125 LTV1Q96GA3 475 aaPredicted RBP13.87□□□□□ -0.19
STRC-203ENST00000440125 CCDC141Q6ZP82 1450 aa13.86□□□□□ -0.19
STRC-203ENST00000440125 REC8O95072 547 aa13.86□□□□□ -0.19
STRC-203ENST00000440125 LRPPRCP42704 1394 aaKnown RBP13.86□□□□□ -0.19
STRC-203ENST00000440125 NKTRP30414 1462 aaKnown RBP13.85□□□□□ -0.19
STRC-203ENST00000440125 NECTIN2Q92692 538 aa13.85□□□□□ -0.19
STRC-203ENST00000440125 PARD3Q8TEW0 1356 aa13.85□□□□□ -0.19
STRC-203ENST00000440125 ADGRL1O94910 1474 aa13.85□□□□□ -0.19
STRC-203ENST00000440125 TCOF1Q13428 1488 aaKnown RBP13.85□□□□□ -0.19
STRC-203ENST00000440125 NINLQ9Y2I6 1382 aa13.85□□□□□ -0.19
STRC-203ENST00000440125 RALGAPBQ86X10 1494 aa13.85□□□□□ -0.19
STRC-203ENST00000440125 CDC45O75419 566 aa13.84□□□□□ -0.19
STRC-203ENST00000440125 AMPHP49418 695 aa13.84□□□□□ -0.19
STRC-203ENST00000440125 NASPP49321 788 aaPredicted RBP13.84□□□□□ -0.19
STRC-203ENST00000440125 PLEKHH2Q8IVE3 1493 aa13.84□□□□□ -0.19
STRC-203ENST00000440125 TBC1D2Q9BYX2 928 aa13.84□□□□□ -0.19
STRC-203ENST00000440125 NUCB2P80303 420 aa13.84□□□□□ -0.19
STRC-203ENST00000440125 RNF123Q5XPI4 1314 aa13.84□□□□□ -0.19
STRC-203ENST00000440125 FANCAO15360 1455 aa13.83□□□□□ -0.19
STRC-203ENST00000440125 INTS3Q68E01 1043 aaKnown RBP13.83□□□□□ -0.2
STRC-203ENST00000440125 PER1O15534 1290 aaPredicted RBP13.83□□□□□ -0.2
STRC-203ENST00000440125 C8orf34Q49A92 452 aa13.83□□□□□ -0.2
STRC-203ENST00000440125 ANO2Q9NQ90 1003 aa13.83□□□□□ -0.2
STRC-203ENST00000440125 NSD3Q9BZ95 1437 aa13.83□□□□□ -0.2
STRC-203ENST00000440125 KIF14Q15058 1648 aa13.83□□□□□ -0.2
STRC-203ENST00000440125 A0A0G2JS52 829 aa13.83□□□□□ -0.2
STRC-203ENST00000440125 NGDNQ8NEJ9 315 aaKnown RBP13.82□□□□□ -0.2
STRC-203ENST00000440125 TMEM57Q8N5G2 664 aa13.82□□□□□ -0.2
STRC-203ENST00000440125 FAM13BQ9NYF5 915 aa13.82□□□□□ -0.2
STRC-203ENST00000440125 CHD1O14646 1710 aa13.82□□□□□ -0.2
STRC-203ENST00000440125 AMER1Q5JTC6 1135 aaPredicted RBP13.82□□□□□ -0.2
STRC-203ENST00000440125 CAVIN1Q6NZI2 390 aaKnown RBP13.82□□□□□ -0.2
STRC-203ENST00000440125 TESK2Q96S53 571 aa13.82□□□□□ -0.2
STRC-203ENST00000440125 ERCC6L2Q5T890 1561 aa13.82□□□□□ -0.2
STRC-203ENST00000440125 GRPEL1Q9HAV7 217 aa13.81□□□□□ -0.2
STRC-203ENST00000440125 SSH1Q8WYL5 1049 aa13.81□□□□□ -0.2
STRC-203ENST00000440125 RNF214Q8ND24 703 aa13.81□□□□□ -0.2
STRC-203ENST00000440125 PHF14O94880 888 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 TMPOP42166 694 aaKnown RBP13.8□□□□□ -0.2
STRC-203ENST00000440125 CHD1LQ86WJ1 897 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 ADGRF5Q8IZF2 1346 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 WDR7Q9Y4E6 1490 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 TWISTNBQ3B726 338 aaPredicted RBP13.8□□□□□ -0.2
STRC-203ENST00000440125 PRAM1Q96QH2 718 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 EID1Q9Y6B2 187 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 ABCC2Q92887 1545 aa13.8□□□□□ -0.2
STRC-203ENST00000440125 TEX14Q8IWB6 1497 aa13.79□□□□□ -0.2
STRC-203ENST00000440125 PCDHB15Q9Y5E8 787 aa13.79□□□□□ -0.2
STRC-203ENST00000440125 GCC1Q96CN9 775 aa13.78□□□□□ -0.2
STRC-203ENST00000440125 PZPP20742 1482 aa13.78□□□□□ -0.2
STRC-203ENST00000440125 CT47B1P0C2W7 299 aaPredicted RBP13.78□□□□□ -0.2
STRC-203ENST00000440125 FKBP5Q13451 457 aaPredicted RBP13.78□□□□□ -0.2
STRC-203ENST00000440125 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.78□□□□□ -0.2
STRC-203ENST00000440125 CEBPAP49715 358 aaPredicted RBP13.78□□□□□ -0.2
STRC-203ENST00000440125 GOLGA6L6A8MZA4 724 aa13.78□□□□□ -0.2
STRC-203ENST00000440125 PRPF40AO75400 957 aaKnown RBP13.78□□□□□ -0.2
STRC-203ENST00000440125 THUMPD2Q9BTF0 503 aaKnown RBP13.78□□□□□ -0.2
STRC-203ENST00000440125 CABP1Q9NZU7 370 aa13.78□□□□□ -0.2
STRC-203ENST00000440125 R3HCC1Q9Y3T6 440 aaKnown RBP13.77□□□□□ -0.21
STRC-203ENST00000440125 PRAG1Q86YV5 1406 aa13.77□□□□□ -0.21
STRC-203ENST00000440125 K7ELQ4 463 aaPredicted RBP13.77□□□□□ -0.21
STRC-203ENST00000440125 SPINK5Q9NQ38 1064 aaPredicted RBP13.77□□□□□ -0.21
STRC-203ENST00000440125 ESPNB1AK53 854 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 PRKCSHP14314 528 aaPredicted RBP13.76□□□□□ -0.21
STRC-203ENST00000440125 NEK4P51957 841 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 TNNQ9UQP3 1299 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 CHMP3Q9Y3E7 222 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 NRDCO43847 1150 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 SPATA31E1Q6ZUB1 1445 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 SEC24BO95487 1268 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 EIF2S2P20042 333 aaKnown RBP13.76□□□□□ -0.21
STRC-203ENST00000440125 TBC1D32Q96NH3 1257 aa13.76□□□□□ -0.21
STRC-203ENST00000440125 PLCH2O75038 1416 aa13.75□□□□□ -0.21
STRC-203ENST00000440125 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.75□□□□□ -0.21
STRC-203ENST00000440125 TRIM27P14373 513 aa13.75□□□□□ -0.21
STRC-203ENST00000440125 RABEP1Q15276 862 aa13.75□□□□□ -0.21
STRC-203ENST00000440125 TSPYL4Q9UJ04 414 aa13.75□□□□□ -0.21
STRC-203ENST00000440125 GPATCH3Q96I76 525 aa13.75□□□□□ -0.21
STRC-203ENST00000440125 CSPP1Q1MSJ5 1256 aa13.74□□□□□ -0.21
STRC-203ENST00000440125 TRAPPC8Q9Y2L5 1435 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms