RNA–Protein interactions for RNA: ENST00000440014.6

PDE4A-204, Transcript of phosphodiesterase 4A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PDE4A, Length 2,478 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4A-204ENST00000440014 PDE3AQ14432 1141 aa16.96■□□□□ 0.31
PDE4A-204ENST00000440014 CLUAP1Q96AJ1 413 aa16.96■□□□□ 0.31
PDE4A-204ENST00000440014 RRAGDQ9NQL2 400 aaPredicted RBP16.96■□□□□ 0.31
PDE4A-204ENST00000440014 NLRP1Q9C000 1473 aa16.96■□□□□ 0.31
PDE4A-204ENST00000440014 CDCA8Q53HL2 280 aa16.96■□□□□ 0.31
PDE4A-204ENST00000440014 NINLQ9Y2I6 1382 aa16.95■□□□□ 0.3
PDE4A-204ENST00000440014 IQGAP3Q86VI3 1631 aa16.95■□□□□ 0.3
PDE4A-204ENST00000440014 ANTXR1Q9H6X2 564 aa16.95■□□□□ 0.3
PDE4A-204ENST00000440014 KDM4FA0A1W2PPD8 638 aa16.94■□□□□ 0.3
PDE4A-204ENST00000440014 CANXP27824 592 aaKnown RBP16.94■□□□□ 0.3
PDE4A-204ENST00000440014 UPF2Q9HAU5 1272 aaKnown RBP16.93■□□□□ 0.3
PDE4A-204ENST00000440014 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
PDE4A-204ENST00000440014 COG6Q9Y2V7 657 aa16.93■□□□□ 0.3
PDE4A-204ENST00000440014 MADDQ8WXG6 1647 aa16.93■□□□□ 0.3
PDE4A-204ENST00000440014 IQGAP1P46940 1657 aa16.92■□□□□ 0.3
PDE4A-204ENST00000440014 CENPJQ9HC77 1338 aaPredicted RBP16.92■□□□□ 0.3
PDE4A-204ENST00000440014 PANK1Q8TE04 598 aa16.92■□□□□ 0.3
PDE4A-204ENST00000440014 VWDEQ8N2E2 1590 aa16.91■□□□□ 0.3
PDE4A-204ENST00000440014 FER1L4A9Z1Z3 1794 aa16.91■□□□□ 0.3
PDE4A-204ENST00000440014 DMRT2Q9Y5R5 561 aa16.91■□□□□ 0.3
PDE4A-204ENST00000440014 KANK1Q14678 1352 aa16.91■□□□□ 0.3
PDE4A-204ENST00000440014 NGEFQ8N5V2 710 aa16.91■□□□□ 0.3
PDE4A-204ENST00000440014 ESF1Q9H501 851 aaKnown RBP16.91■□□□□ 0.3
PDE4A-204ENST00000440014 TBC1D32Q96NH3 1257 aa16.9■□□□□ 0.3
PDE4A-204ENST00000440014 ABCC3O15438 1527 aa16.89■□□□□ 0.29
PDE4A-204ENST00000440014 ZC3H13Q5T200 1668 aaKnown RBP16.89■□□□□ 0.29
PDE4A-204ENST00000440014 TBC1D2Q9BYX2 928 aa16.89■□□□□ 0.29
PDE4A-204ENST00000440014 GOLGA6L3A6NEY3 463 aa16.88■□□□□ 0.29
PDE4A-204ENST00000440014 GLIPR1L2Q4G1C9 344 aa16.88■□□□□ 0.29
PDE4A-204ENST00000440014 SCAF11Q99590 1463 aaKnown RBP16.88■□□□□ 0.29
PDE4A-204ENST00000440014 MYOM1P52179 1685 aa16.88■□□□□ 0.29
PDE4A-204ENST00000440014 LMTK2Q8IWU2 1503 aa16.88■□□□□ 0.29
PDE4A-204ENST00000440014 CLTCQ00610 1675 aaKnown RBP16.88■□□□□ 0.29
PDE4A-204ENST00000440014 RIMS1Q86UR5 1692 aaKnown RBP16.88■□□□□ 0.29
PDE4A-204ENST00000440014 PMFBP1Q8TBY8 1022 aa16.88■□□□□ 0.29
PDE4A-204ENST00000440014 ARXQ96QS3 562 aa16.87■□□□□ 0.29
PDE4A-204ENST00000440014 MROH2AA6NES4 1674 aa16.87■□□□□ 0.29
PDE4A-204ENST00000440014 ZMYM3Q14202 1370 aa16.87■□□□□ 0.29
PDE4A-204ENST00000440014 XRCC6P12956 609 aaKnown RBP eCLIP16.87■□□□□ 0.29
PDE4A-204ENST00000440014 PTPRMP28827 1452 aa16.85■□□□□ 0.29
PDE4A-204ENST00000440014 CEP152O94986 1710 aa16.85■□□□□ 0.29
PDE4A-204ENST00000440014 FSD2A1L4K1 749 aa16.85■□□□□ 0.29
PDE4A-204ENST00000440014 AAMPQ13685 434 aa16.85■□□□□ 0.29
PDE4A-204ENST00000440014 WWC1Q8IX03 1113 aa16.84■□□□□ 0.29
PDE4A-204ENST00000440014 VSIG10Q8N0Z9 540 aa16.84■□□□□ 0.29
PDE4A-204ENST00000440014 MCM4P33991 863 aa16.84■□□□□ 0.29
PDE4A-204ENST00000440014 PDZRN3Q9UPQ7 1066 aa16.83■□□□□ 0.28
PDE4A-204ENST00000440014 ARHGAP31Q2M1Z3 1444 aa16.83■□□□□ 0.28
PDE4A-204ENST00000440014 CAMSAP1Q5T5Y3 1602 aa16.83■□□□□ 0.28
PDE4A-204ENST00000440014 ZMYND15Q9H091 742 aa16.82■□□□□ 0.28
PDE4A-204ENST00000440014 PCDHB15Q9Y5E8 787 aa16.82■□□□□ 0.28
PDE4A-204ENST00000440014 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
PDE4A-204ENST00000440014 KDM5AP29375 1690 aaKnown RBP16.82■□□□□ 0.28
PDE4A-204ENST00000440014 TET3O43151 1660 aa16.81■□□□□ 0.28
PDE4A-204ENST00000440014 NAP1L5Q96NT1 182 aaPredicted RBP16.81■□□□□ 0.28
PDE4A-204ENST00000440014 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
PDE4A-204ENST00000440014 C3P01024 1663 aa16.81■□□□□ 0.28
PDE4A-204ENST00000440014 EFCAB6Q5THR3 1501 aa16.81■□□□□ 0.28
PDE4A-204ENST00000440014 SPRYD3Q8NCJ5 442 aa16.81■□□□□ 0.28
PDE4A-204ENST00000440014 PANK2Q9BZ23 570 aa16.81■□□□□ 0.28
PDE4A-204ENST00000440014 CLCN1P35523 988 aa16.8■□□□□ 0.28
PDE4A-204ENST00000440014 CEBPAP49715 358 aaPredicted RBP16.8■□□□□ 0.28
PDE4A-204ENST00000440014 RARSP54136 660 aaKnown RBP16.8■□□□□ 0.28
PDE4A-204ENST00000440014 SPHKAPQ2M3C7 1700 aa16.8■□□□□ 0.28
PDE4A-204ENST00000440014 RWDD1Q9H446 243 aaPredicted RBP16.79■□□□□ 0.28
PDE4A-204ENST00000440014 NPATQ14207 1427 aa16.79■□□□□ 0.28
PDE4A-204ENST00000440014 RLBP1P12271 317 aa16.79■□□□□ 0.28
PDE4A-204ENST00000440014 CHMP5Q9NZZ3 219 aa16.78■□□□□ 0.28
PDE4A-204ENST00000440014 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
PDE4A-204ENST00000440014 TRAK2O60296 914 aa16.77■□□□□ 0.28
PDE4A-204ENST00000440014 POLR3AO14802 1390 aaPredicted RBP16.77■□□□□ 0.28
PDE4A-204ENST00000440014 TNNQ9UQP3 1299 aa16.77■□□□□ 0.27
PDE4A-204ENST00000440014 MRE11P49959 708 aa16.76■□□□□ 0.27
PDE4A-204ENST00000440014 NEUROD2Q15784 382 aa16.76■□□□□ 0.27
PDE4A-204ENST00000440014 CARD14Q9BXL6 1004 aa16.76■□□□□ 0.27
PDE4A-204ENST00000440014 FBXO31Q5XUX0 539 aaPredicted RBP16.76■□□□□ 0.27
PDE4A-204ENST00000440014 PLPPR3Q6T4P5 718 aa16.75■□□□□ 0.27
PDE4A-204ENST00000440014 C22orf23Q9BZE7 217 aa16.75■□□□□ 0.27
PDE4A-204ENST00000440014 BCL2L13Q9BXK5 485 aa16.75■□□□□ 0.27
PDE4A-204ENST00000440014 TRPM2O94759 1503 aa16.75■□□□□ 0.27
PDE4A-204ENST00000440014 ERVK-7P63135 1459 aa16.74■□□□□ 0.27
PDE4A-204ENST00000440014 HSP90AA2PQ14568 343 aaPredicted RBP16.74■□□□□ 0.27
PDE4A-204ENST00000440014 RRP7AQ9Y3A4 280 aaKnown RBP16.74■□□□□ 0.27
PDE4A-204ENST00000440014 SPATA31D1Q6ZQQ2 1576 aa16.74■□□□□ 0.27
PDE4A-204ENST00000440014 SLC24A1O60721 1099 aa16.73■□□□□ 0.27
PDE4A-204ENST00000440014 HSP90AA1P07900 732 aaKnown RBP16.73■□□□□ 0.27
PDE4A-204ENST00000440014 RUNDC1Q96C34 613 aa16.73■□□□□ 0.27
PDE4A-204ENST00000440014 NOS1P29475 1434 aa16.73■□□□□ 0.27
PDE4A-204ENST00000440014 MFAP1P55081 439 aaKnown RBP16.73■□□□□ 0.27
PDE4A-204ENST00000440014 PREX1Q8TCU6 1659 aa16.72■□□□□ 0.27
PDE4A-204ENST00000440014 DDX11L8A8MPP1 907 aa16.72■□□□□ 0.27
PDE4A-204ENST00000440014 WDR63Q8IWG1 891 aa16.72■□□□□ 0.27
PDE4A-204ENST00000440014 TCP11L2Q8N4U5 519 aa16.72■□□□□ 0.27
PDE4A-204ENST00000440014 TNRQ92752 1358 aa16.71■□□□□ 0.27
PDE4A-204ENST00000440014 IQSEC2Q5JU85 1478 aa16.71■□□□□ 0.27
PDE4A-204ENST00000440014 GRPEL1Q9HAV7 217 aa16.71■□□□□ 0.27
PDE4A-204ENST00000440014 CLTCL1P53675 1640 aa16.71■□□□□ 0.26
PDE4A-204ENST00000440014 SHPRHQ149N8 1683 aa16.7■□□□□ 0.26
PDE4A-204ENST00000440014 MVPQ14764 893 aaKnown RBP16.7■□□□□ 0.26
PDE4A-204ENST00000440014 HSCBQ8IWL3 235 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms