RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 IFFO2Q5TF58 517 aa14.1□□□□□ -0.15
CCBE1-202ENST00000439986 ZNF622Q969S3 477 aaKnown RBP eCLIP14.1□□□□□ -0.15
CCBE1-202ENST00000439986 KIF16BQ96L93 1317 aa14.1□□□□□ -0.15
CCBE1-202ENST00000439986 ST18O60284 1047 aa14.09□□□□□ -0.15
CCBE1-202ENST00000439986 WWC3Q9ULE0 1092 aa14.09□□□□□ -0.15
CCBE1-202ENST00000439986 SUDS3Q9H7L9 328 aaPredicted RBP14.09□□□□□ -0.15
CCBE1-202ENST00000439986 DDX19BQ9UMR2 479 aa14.09□□□□□ -0.15
CCBE1-202ENST00000439986 FOSBP53539 338 aa14.09□□□□□ -0.15
CCBE1-202ENST00000439986 HMGN5P82970 282 aaKnown RBP14.09□□□□□ -0.15
CCBE1-202ENST00000439986 C22orf23Q9BZE7 217 aa14.09□□□□□ -0.15
CCBE1-202ENST00000439986 SH3BGRP55822 239 aaPredicted RBP14.08□□□□□ -0.15
CCBE1-202ENST00000439986 SAMD1Q6SPF0 538 aaPredicted RBP14.08□□□□□ -0.15
CCBE1-202ENST00000439986 TPM3P06753 285 aa14.08□□□□□ -0.16
CCBE1-202ENST00000439986 HMMRO75330 724 aa14.07□□□□□ -0.16
CCBE1-202ENST00000439986 NBPF1Q3BBV0 1214 aa14.07□□□□□ -0.16
CCBE1-202ENST00000439986 PPP2R1AP30153 589 aa14.07□□□□□ -0.16
CCBE1-202ENST00000439986 MCTP1Q6DN14 999 aa14.07□□□□□ -0.16
CCBE1-202ENST00000439986 WASHC2CQ9Y4E1 1318 aa14.07□□□□□ -0.16
CCBE1-202ENST00000439986 MAP7D2Q96T17 732 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 EHBP1L1Q8N3D4 1523 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 KIAA1107Q9UPP5 1409 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 SETSIPP0DME0 302 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 AK7Q96M32 723 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 PHF14O94880 888 aa14.06□□□□□ -0.16
CCBE1-202ENST00000439986 EVA1CP58658 441 aa14.05□□□□□ -0.16
CCBE1-202ENST00000439986 EIF2S2P20042 333 aaKnown RBP14.05□□□□□ -0.16
CCBE1-202ENST00000439986 CSPP1Q1MSJ5 1256 aa14.05□□□□□ -0.16
CCBE1-202ENST00000439986 CCDC66A2RUB6 948 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 SYTL4Q96C24 671 aaPredicted RBP14.04□□□□□ -0.16
CCBE1-202ENST00000439986 MAPKBP1O60336 1514 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 AAMPQ13685 434 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 BCAR3O75815 825 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 MRE11P49959 708 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 FAM184AQ8NB25 1140 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 CWC22Q9HCG8 908 aaKnown RBP14.04□□□□□ -0.16
CCBE1-202ENST00000439986 EID1Q9Y6B2 187 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 KDM4AO75164 1064 aa14.04□□□□□ -0.16
CCBE1-202ENST00000439986 TCEAL9Q9UHQ7 104 aa14.03□□□□□ -0.16
CCBE1-202ENST00000439986 SKAP1Q86WV1 359 aa14.03□□□□□ -0.16
CCBE1-202ENST00000439986 CCDC34Q96HJ3 373 aa14.03□□□□□ -0.16
CCBE1-202ENST00000439986 PCMTD1Q96MG8 357 aaPredicted RBP14.03□□□□□ -0.16
CCBE1-202ENST00000439986 FAM13BQ9NYF5 915 aa14.03□□□□□ -0.16
CCBE1-202ENST00000439986 FAM43AQ8N2R8 423 aa14.03□□□□□ -0.16
CCBE1-202ENST00000439986 LNPKQ9C0E8 428 aa14.03□□□□□ -0.16
CCBE1-202ENST00000439986 ZFP91Q96JP5 570 aaPredicted RBP14.02□□□□□ -0.16
CCBE1-202ENST00000439986 MAP3K1Q13233 1512 aa14.02□□□□□ -0.16
CCBE1-202ENST00000439986 TRAK2O60296 914 aa14.02□□□□□ -0.17
CCBE1-202ENST00000439986 TRIM34Q9BYJ4 488 aa14.02□□□□□ -0.17
CCBE1-202ENST00000439986 LMOD3Q0VAK6 560 aa14.02□□□□□ -0.17
CCBE1-202ENST00000439986 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.17
CCBE1-202ENST00000439986 PCF11O94913 1555 aaKnown RBP14.01□□□□□ -0.17
CCBE1-202ENST00000439986 CCDC97Q96F63 343 aaPredicted RBP14.01□□□□□ -0.17
CCBE1-202ENST00000439986 NCOA1Q15788 1441 aa14.01□□□□□ -0.17
CCBE1-202ENST00000439986 PDE3AQ14432 1141 aa14.01□□□□□ -0.17
CCBE1-202ENST00000439986 AKAP17AQ02040 695 aaKnown RBP14.01□□□□□ -0.17
CCBE1-202ENST00000439986 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
CCBE1-202ENST00000439986 CTDP1Q9Y5B0 961 aaPredicted RBP14.01□□□□□ -0.17
CCBE1-202ENST00000439986 KRI1Q8N9T8 703 aaKnown RBP14□□□□□ -0.17
CCBE1-202ENST00000439986 IPO4Q8TEX9 1081 aaKnown RBP14□□□□□ -0.17
CCBE1-202ENST00000439986 C1orf141Q5JVX7 400 aa14□□□□□ -0.17
CCBE1-202ENST00000439986 DHX16O60231 1041 aaKnown RBP14□□□□□ -0.17
CCBE1-202ENST00000439986 PTPRGP23470 1445 aa14□□□□□ -0.17
CCBE1-202ENST00000439986 EVC2Q86UK5 1308 aa13.99□□□□□ -0.17
CCBE1-202ENST00000439986 TCP11L2Q8N4U5 519 aa13.99□□□□□ -0.17
CCBE1-202ENST00000439986 RIPK4P57078 832 aa13.99□□□□□ -0.17
CCBE1-202ENST00000439986 DAPK1P53355 1430 aa13.99□□□□□ -0.17
CCBE1-202ENST00000439986 ANKRD30BQ9BXX2 1392 aa13.99□□□□□ -0.17
CCBE1-202ENST00000439986 DYDC1Q8WWB3 177 aa13.99□□□□□ -0.17
CCBE1-202ENST00000439986 ANO2Q9NQ90 1003 aa13.98□□□□□ -0.17
CCBE1-202ENST00000439986 MTERF4Q7Z6M4 381 aaKnown RBP13.98□□□□□ -0.17
CCBE1-202ENST00000439986 AQRO60306 1485 aaKnown RBP eCLIP13.98□□□□□ -0.17
CCBE1-202ENST00000439986 FYB1O15117 783 aa13.97□□□□□ -0.17
CCBE1-202ENST00000439986 GOLIM4O00461 696 aa13.97□□□□□ -0.17
CCBE1-202ENST00000439986 TSR1Q2NL82 804 aaKnown RBP13.97□□□□□ -0.17
CCBE1-202ENST00000439986 GOLGA6L19H0YKK7 550 aa13.97□□□□□ -0.17
CCBE1-202ENST00000439986 RBM26Q5T8P6 1007 aaKnown RBP13.97□□□□□ -0.17
CCBE1-202ENST00000439986 C20orf194Q5TEA3 1177 aa13.97□□□□□ -0.17
CCBE1-202ENST00000439986 STAC3Q96MF2 364 aa13.96□□□□□ -0.17
CCBE1-202ENST00000439986 MTMR7Q9Y216 660 aa13.96□□□□□ -0.17
CCBE1-202ENST00000439986 PRDM2Q13029 1718 aa13.96□□□□□ -0.17
CCBE1-202ENST00000439986 SUPT6HQ7KZ85 1726 aaKnown RBP13.96□□□□□ -0.18
CCBE1-202ENST00000439986 TPM2P07951 284 aa13.96□□□□□ -0.18
CCBE1-202ENST00000439986 DIAPH1O60610 1272 aaKnown RBP13.95□□□□□ -0.18
CCBE1-202ENST00000439986 REC8O95072 547 aa13.95□□□□□ -0.18
CCBE1-202ENST00000439986 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.95□□□□□ -0.18
CCBE1-202ENST00000439986 BECN2A8MW95 431 aa13.95□□□□□ -0.18
CCBE1-202ENST00000439986 ZRSR2Q15696 482 aaKnown RBP13.95□□□□□ -0.18
CCBE1-202ENST00000439986 NASPP49321 788 aaPredicted RBP13.94□□□□□ -0.18
CCBE1-202ENST00000439986 MTHFSP49914 203 aa13.94□□□□□ -0.18
CCBE1-202ENST00000439986 NUCB2P80303 420 aa13.94□□□□□ -0.18
CCBE1-202ENST00000439986 SYNE3Q6ZMZ3 975 aa13.94□□□□□ -0.18
CCBE1-202ENST00000439986 VPS37DQ86XT2 251 aa13.94□□□□□ -0.18
CCBE1-202ENST00000439986 NOL10Q9BSC4 688 aaKnown RBP13.94□□□□□ -0.18
CCBE1-202ENST00000439986 HSP90AB4PQ58FF6 505 aa13.94□□□□□ -0.18
CCBE1-202ENST00000439986 DIAPH3Q9NSV4 1193 aa13.94□□□□□ -0.18
CCBE1-202ENST00000439986 ROCK1Q13464 1354 aa13.93□□□□□ -0.18
CCBE1-202ENST00000439986 MINK1Q8N4C8 1332 aaPredicted RBP13.93□□□□□ -0.18
CCBE1-202ENST00000439986 TTC5Q8N0Z6 440 aa13.93□□□□□ -0.18
CCBE1-202ENST00000439986 POLA1P09884 1462 aaPredicted RBP13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms