RNA–Protein interactions for RNA: ENST00000439088.1

LINC00163-202, long intergenic non-protein coding RNA 163, humanhuman

TSL 1 (best)

Gene LINC00163, Length 2,135 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00163-202ENST00000439088 SIRT1Q96EB6 747 aa20.2■□□□□ 0.82
LINC00163-202ENST00000439088 SRPK2P78362 688 aaKnown RBP20.19■□□□□ 0.82
LINC00163-202ENST00000439088 INSRP06213 1382 aa20.18■□□□□ 0.82
LINC00163-202ENST00000439088 BCANQ96GW7 911 aa20.18■□□□□ 0.82
LINC00163-202ENST00000439088 ATAD2Q6PL18 1390 aa20.18■□□□□ 0.82
LINC00163-202ENST00000439088 ANKRD36BQ8N2N9 1353 aa20.18■□□□□ 0.82
LINC00163-202ENST00000439088 PLEKHG1Q9ULL1 1385 aa20.18■□□□□ 0.82
LINC00163-202ENST00000439088 LTKP29376 864 aa20.18■□□□□ 0.82
LINC00163-202ENST00000439088 NSD3Q9BZ95 1437 aa20.17■□□□□ 0.82
LINC00163-202ENST00000439088 TXNDC2Q86VQ3 553 aa20.17■□□□□ 0.82
LINC00163-202ENST00000439088 EID1Q9Y6B2 187 aa20.17■□□□□ 0.82
LINC00163-202ENST00000439088 PLPPR3Q6T4P5 718 aa20.17■□□□□ 0.82
LINC00163-202ENST00000439088 THEMISQ8N1K5 641 aaPredicted RBP20.17■□□□□ 0.82
LINC00163-202ENST00000439088 SLIT1O75093 1534 aa20.16■□□□□ 0.82
LINC00163-202ENST00000439088 WAPLQ7Z5K2 1190 aa20.16■□□□□ 0.82
LINC00163-202ENST00000439088 CDK19Q9BWU1 502 aa20.16■□□□□ 0.82
LINC00163-202ENST00000439088 ARHGAP23Q9P227 1491 aa20.15■□□□□ 0.82
LINC00163-202ENST00000439088 TECPR2O15040 1411 aa20.15■□□□□ 0.82
LINC00163-202ENST00000439088 ADAMTS13Q76LX8 1427 aa20.15■□□□□ 0.82
LINC00163-202ENST00000439088 USP32Q8NFA0 1604 aa20.14■□□□□ 0.82
LINC00163-202ENST00000439088 FAM135BQ49AJ0 1406 aa20.14■□□□□ 0.82
LINC00163-202ENST00000439088 PLEKHH1Q9ULM0 1364 aa20.13■□□□□ 0.81
LINC00163-202ENST00000439088 CGNL1Q0VF96 1302 aa20.13■□□□□ 0.81
LINC00163-202ENST00000439088 KNDC1Q76NI1 1749 aa20.13■□□□□ 0.81
LINC00163-202ENST00000439088 SUPT16HQ9Y5B9 1047 aaKnown RBP20.11■□□□□ 0.81
LINC00163-202ENST00000439088 MED14O60244 1454 aa20.11■□□□□ 0.81
LINC00163-202ENST00000439088 TERF2IPQ9NYB0 399 aa20.11■□□□□ 0.81
LINC00163-202ENST00000439088 MORC1Q86VD1 984 aa20.1■□□□□ 0.81
LINC00163-202ENST00000439088 NSD2O96028 1365 aa20.1■□□□□ 0.81
LINC00163-202ENST00000439088 RIMS1Q86UR5 1692 aaKnown RBP20.1■□□□□ 0.81
LINC00163-202ENST00000439088 CPS1P31327 1500 aa20.09■□□□□ 0.81
LINC00163-202ENST00000439088 ADAMTSL3P82987 1691 aa20.09■□□□□ 0.81
LINC00163-202ENST00000439088 A0A1W2PP64 1363 aa20.08■□□□□ 0.81
LINC00163-202ENST00000439088 BLMP54132 1417 aaPredicted RBP20.08■□□□□ 0.81
LINC00163-202ENST00000439088 NEFLP07196 543 aa20.08■□□□□ 0.8
LINC00163-202ENST00000439088 TBX22Q9Y458 520 aa20.08■□□□□ 0.8
LINC00163-202ENST00000439088 WASLO00401 505 aaPredicted RBP20.07■□□□□ 0.8
LINC00163-202ENST00000439088 WDR43Q15061 677 aaKnown RBP eCLIP20.07■□□□□ 0.8
LINC00163-202ENST00000439088 ADAMTS8Q9UP79 889 aa20.07■□□□□ 0.8
LINC00163-202ENST00000439088 SMG6Q86US8 1419 aaKnown RBP20.06■□□□□ 0.8
LINC00163-202ENST00000439088 CD163L1Q9NR16 1453 aa20.06■□□□□ 0.8
LINC00163-202ENST00000439088 FKBP8Q14318 412 aa20.05■□□□□ 0.8
LINC00163-202ENST00000439088 HDGFL2Q7Z4V5 671 aaPredicted RBP20.05■□□□□ 0.8
LINC00163-202ENST00000439088 CABP1Q9NZU7 370 aa20.05■□□□□ 0.8
LINC00163-202ENST00000439088 SLC26A8Q96RN1 970 aa20.05■□□□□ 0.8
LINC00163-202ENST00000439088 CEP170BQ9Y4F5 1589 aaPredicted RBP20.05■□□□□ 0.8
LINC00163-202ENST00000439088 ROBO2Q9HCK4 1378 aa20.04■□□□□ 0.8
LINC00163-202ENST00000439088 POLR3AO14802 1390 aaPredicted RBP20.03■□□□□ 0.8
LINC00163-202ENST00000439088 NUDCQ9Y266 331 aa20.03■□□□□ 0.8
LINC00163-202ENST00000439088 DIP2AQ14689 1571 aa20.01■□□□□ 0.79
LINC00163-202ENST00000439088 SENP3-EIF4A1A0A087X0R7 540 aa20.01■□□□□ 0.79
LINC00163-202ENST00000439088 PDE3BQ13370 1112 aa20.01■□□□□ 0.79
LINC00163-202ENST00000439088 ATP7BP35670 1465 aa20.01■□□□□ 0.79
LINC00163-202ENST00000439088 PTPRUQ92729 1446 aa20■□□□□ 0.79
LINC00163-202ENST00000439088 FYB1O15117 783 aa19.99■□□□□ 0.79
LINC00163-202ENST00000439088 TNNT2P45379 298 aaPredicted RBP19.99■□□□□ 0.79
LINC00163-202ENST00000439088 NUDT16Q96DE0 195 aaKnown RBP19.99■□□□□ 0.79
LINC00163-202ENST00000439088 AMOTL2Q9Y2J4 779 aa19.99■□□□□ 0.79
LINC00163-202ENST00000439088 SETD1BQ9UPS6 1966 aaKnown RBP19.98■□□□□ 0.79
LINC00163-202ENST00000439088 CCDC61Q9Y6R9 512 aa19.97■□□□□ 0.79
LINC00163-202ENST00000439088 ZNF142P52746 1687 aaPredicted RBP19.96■□□□□ 0.79
LINC00163-202ENST00000439088 MTHFSP49914 203 aa19.96■□□□□ 0.79
LINC00163-202ENST00000439088 SALL2Q9Y467 1007 aaPredicted RBP19.96■□□□□ 0.79
LINC00163-202ENST00000439088 PPIP5K1Q6PFW1 1433 aa19.96■□□□□ 0.79
LINC00163-202ENST00000439088 ADGRB2O60241 1585 aa19.96■□□□□ 0.79
LINC00163-202ENST00000439088 ANKLE2Q86XL3 938 aa19.96■□□□□ 0.79
LINC00163-202ENST00000439088 CPSF1Q10570 1443 aaKnown RBP19.95■□□□□ 0.78
LINC00163-202ENST00000439088 PELP1Q8IZL8 1130 aaKnown RBP19.95■□□□□ 0.78
LINC00163-202ENST00000439088 GGNBP2Q9H3C7 697 aa19.95■□□□□ 0.78
LINC00163-202ENST00000439088 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.95■□□□□ 0.78
LINC00163-202ENST00000439088 CFAP53Q96M91 514 aa19.94■□□□□ 0.78
LINC00163-202ENST00000439088 PTCH1Q13635 1447 aa19.94■□□□□ 0.78
LINC00163-202ENST00000439088 PIK3R4Q99570 1358 aa19.94■□□□□ 0.78
LINC00163-202ENST00000439088 ANKRD26Q9UPS8 1709 aa19.93■□□□□ 0.78
LINC00163-202ENST00000439088 ZNF692Q9BU19 519 aaPredicted RBP19.91■□□□□ 0.78
LINC00163-202ENST00000439088 PRR36Q9H6K5 1346 aa19.91■□□□□ 0.78
LINC00163-202ENST00000439088 ERICH6BQ5W0A0 696 aa19.9■□□□□ 0.78
LINC00163-202ENST00000439088 EDC4Q6P2E9 1401 aaKnown RBP19.9■□□□□ 0.78
LINC00163-202ENST00000439088 CDC42BPGQ6DT37 1551 aa19.9■□□□□ 0.78
LINC00163-202ENST00000439088 KIF20BQ96Q89 1820 aa19.89■□□□□ 0.78
LINC00163-202ENST00000439088 XRN1Q8IZH2 1706 aaKnown RBP19.89■□□□□ 0.77
LINC00163-202ENST00000439088 SHPRHQ149N8 1683 aa19.89■□□□□ 0.77
LINC00163-202ENST00000439088 NCKAP5LQ9HCH0 1330 aa19.88■□□□□ 0.77
LINC00163-202ENST00000439088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.88■□□□□ 0.77
LINC00163-202ENST00000439088 NGEFQ8N5V2 710 aa19.88■□□□□ 0.77
LINC00163-202ENST00000439088 RNF123Q5XPI4 1314 aa19.87■□□□□ 0.77
LINC00163-202ENST00000439088 CCDC146Q8IYE0 955 aa19.87■□□□□ 0.77
LINC00163-202ENST00000439088 PLEKHG3A1L390 1219 aa19.87■□□□□ 0.77
LINC00163-202ENST00000439088 CDCA7LQ96GN5 454 aa19.87■□□□□ 0.77
LINC00163-202ENST00000439088 ZNF521Q96K83 1311 aa19.86■□□□□ 0.77
LINC00163-202ENST00000439088 APAF1O14727 1248 aa19.85■□□□□ 0.77
LINC00163-202ENST00000439088 KCNA6P17658 529 aa19.85■□□□□ 0.77
LINC00163-202ENST00000439088 AKAP12Q02952 1782 aa19.85■□□□□ 0.77
LINC00163-202ENST00000439088 MON2Q7Z3U7 1717 aa19.85■□□□□ 0.77
LINC00163-202ENST00000439088 IRX6P78412 446 aaPredicted RBP19.84■□□□□ 0.77
LINC00163-202ENST00000439088 TOPAZ1Q8N9V7 1692 aa19.83■□□□□ 0.77
LINC00163-202ENST00000439088 RUNDC1Q96C34 613 aa19.83■□□□□ 0.77
LINC00163-202ENST00000439088 ITSN1Q15811 1721 aa19.83■□□□□ 0.76
LINC00163-202ENST00000439088 ACEP12821 1306 aa19.81■□□□□ 0.76
LINC00163-202ENST00000439088 PNPLA6Q8IY17 1366 aa19.81■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms