RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 SAFB2Q14151 953 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTCHD3-201ENST00000438700 PLPPR3Q6T4P5 718 aa18.55■□□□□ 0.56
PTCHD3-201ENST00000438700 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.55■□□□□ 0.56
PTCHD3-201ENST00000438700 TULP4Q9NRJ4 1543 aa18.55■□□□□ 0.56
PTCHD3-201ENST00000438700 NLRP1Q9C000 1473 aa18.54■□□□□ 0.56
PTCHD3-201ENST00000438700 TMEM2Q9UHN6 1383 aa18.53■□□□□ 0.56
PTCHD3-201ENST00000438700 AMER1Q5JTC6 1135 aaPredicted RBP18.52■□□□□ 0.56
PTCHD3-201ENST00000438700 EVC2Q86UK5 1308 aa18.52■□□□□ 0.55
PTCHD3-201ENST00000438700 PRAM1Q96QH2 718 aa18.51■□□□□ 0.55
PTCHD3-201ENST00000438700 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
PTCHD3-201ENST00000438700 POGKQ9P215 609 aa18.5■□□□□ 0.55
PTCHD3-201ENST00000438700 CARD14Q9BXL6 1004 aa18.48■□□□□ 0.55
PTCHD3-201ENST00000438700 RNF123Q5XPI4 1314 aa18.48■□□□□ 0.55
PTCHD3-201ENST00000438700 MINK1Q8N4C8 1332 aaPredicted RBP18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 RIMS1Q86UR5 1692 aaKnown RBP18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 DLC1Q96QB1 1528 aa18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 METP08581 1390 aa18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 NPC1L1Q9UHC9 1359 aa18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 CABP2Q9NPB3 220 aa18.47■□□□□ 0.55
PTCHD3-201ENST00000438700 PUS7Q96PZ0 661 aaKnown RBP18.46■□□□□ 0.55
PTCHD3-201ENST00000438700 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
PTCHD3-201ENST00000438700 LTKP29376 864 aa18.44■□□□□ 0.54
PTCHD3-201ENST00000438700 NSD3Q9BZ95 1437 aa18.43■□□□□ 0.54
PTCHD3-201ENST00000438700 SRPK2P78362 688 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-201ENST00000438700 DEKP35659 375 aaKnown RBP18.43■□□□□ 0.54
PTCHD3-201ENST00000438700 WAPLQ7Z5K2 1190 aa18.43■□□□□ 0.54
PTCHD3-201ENST00000438700 CDCA7LQ96GN5 454 aa18.43■□□□□ 0.54
PTCHD3-201ENST00000438700 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
PTCHD3-201ENST00000438700 PPP2R1AP30153 589 aa18.42■□□□□ 0.54
PTCHD3-201ENST00000438700 PAK3O75914 559 aaPredicted RBP18.42■□□□□ 0.54
PTCHD3-201ENST00000438700 TXNDC2Q86VQ3 553 aa18.42■□□□□ 0.54
PTCHD3-201ENST00000438700 PLEKHG1Q9ULL1 1385 aa18.42■□□□□ 0.54
PTCHD3-201ENST00000438700 SLIT1O75093 1534 aa18.42■□□□□ 0.54
PTCHD3-201ENST00000438700 KNDC1Q76NI1 1749 aa18.41■□□□□ 0.54
PTCHD3-201ENST00000438700 ADAMTS13Q76LX8 1427 aa18.41■□□□□ 0.54
PTCHD3-201ENST00000438700 NBR1Q14596 966 aa18.41■□□□□ 0.54
PTCHD3-201ENST00000438700 ARHGAP23Q9P227 1491 aa18.41■□□□□ 0.54
PTCHD3-201ENST00000438700 CCDC136Q96JN2 1154 aa18.4■□□□□ 0.54
PTCHD3-201ENST00000438700 ADAMTSL3P82987 1691 aa18.4■□□□□ 0.54
PTCHD3-201ENST00000438700 BLMP54132 1417 aaPredicted RBP18.4■□□□□ 0.54
PTCHD3-201ENST00000438700 EID1Q9Y6B2 187 aa18.4■□□□□ 0.54
PTCHD3-201ENST00000438700 ANKRD36BQ8N2N9 1353 aa18.39■□□□□ 0.53
PTCHD3-201ENST00000438700 RCAN3Q9UKA8 241 aa18.39■□□□□ 0.53
PTCHD3-201ENST00000438700 ADAMTS8Q9UP79 889 aa18.39■□□□□ 0.53
PTCHD3-201ENST00000438700 USP32Q8NFA0 1604 aa18.38■□□□□ 0.53
PTCHD3-201ENST00000438700 ATAD2Q6PL18 1390 aa18.38■□□□□ 0.53
PTCHD3-201ENST00000438700 CDK19Q9BWU1 502 aa18.38■□□□□ 0.53
PTCHD3-201ENST00000438700 TECPR2O15040 1411 aa18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 NINLQ9Y2I6 1382 aa18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 CPS1P31327 1500 aa18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 RRP1P56182 461 aaKnown RBP18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 THEMISQ8N1K5 641 aaPredicted RBP18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 CEP170BQ9Y4F5 1589 aaPredicted RBP18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
PTCHD3-201ENST00000438700 WDR43Q15061 677 aaKnown RBP eCLIP18.35■□□□□ 0.53
PTCHD3-201ENST00000438700 FAM135BQ49AJ0 1406 aa18.35■□□□□ 0.53
PTCHD3-201ENST00000438700 MED14O60244 1454 aa18.35■□□□□ 0.53
PTCHD3-201ENST00000438700 A0A1W2PP64 1363 aa18.35■□□□□ 0.53
PTCHD3-201ENST00000438700 SLC26A8Q96RN1 970 aa18.34■□□□□ 0.53
PTCHD3-201ENST00000438700 CGNL1Q0VF96 1302 aa18.33■□□□□ 0.53
PTCHD3-201ENST00000438700 NOP58Q9Y2X3 529 aaKnown RBP18.33■□□□□ 0.52
PTCHD3-201ENST00000438700 ROBO2Q9HCK4 1378 aa18.32■□□□□ 0.52
PTCHD3-201ENST00000438700 SIRT1Q96EB6 747 aa18.32■□□□□ 0.52
PTCHD3-201ENST00000438700 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
PTCHD3-201ENST00000438700 INSRP06213 1382 aa18.32■□□□□ 0.52
PTCHD3-201ENST00000438700 MORC1Q86VD1 984 aa18.31■□□□□ 0.52
PTCHD3-201ENST00000438700 EXOC6Q8TAG9 804 aa18.31■□□□□ 0.52
PTCHD3-201ENST00000438700 ZNF142P52746 1687 aaPredicted RBP18.3■□□□□ 0.52
PTCHD3-201ENST00000438700 TERF2IPQ9NYB0 399 aa18.3■□□□□ 0.52
PTCHD3-201ENST00000438700 PTPRUQ92729 1446 aa18.3■□□□□ 0.52
PTCHD3-201ENST00000438700 WASLO00401 505 aaPredicted RBP18.29■□□□□ 0.52
PTCHD3-201ENST00000438700 CABP1Q9NZU7 370 aa18.29■□□□□ 0.52
PTCHD3-201ENST00000438700 TNNT2P45379 298 aaPredicted RBP18.28■□□□□ 0.52
PTCHD3-201ENST00000438700 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
PTCHD3-201ENST00000438700 NSD2O96028 1365 aa18.28■□□□□ 0.52
PTCHD3-201ENST00000438700 PLIN1O60240 522 aa18.28■□□□□ 0.52
PTCHD3-201ENST00000438700 TBX22Q9Y458 520 aa18.27■□□□□ 0.52
PTCHD3-201ENST00000438700 CCDC146Q8IYE0 955 aa18.27■□□□□ 0.52
PTCHD3-201ENST00000438700 SETD1BQ9UPS6 1966 aaKnown RBP18.26■□□□□ 0.51
PTCHD3-201ENST00000438700 HDGFL2Q7Z4V5 671 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-201ENST00000438700 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.26■□□□□ 0.51
PTCHD3-201ENST00000438700 ATP7BP35670 1465 aa18.25■□□□□ 0.51
PTCHD3-201ENST00000438700 AMOTL2Q9Y2J4 779 aa18.24■□□□□ 0.51
PTCHD3-201ENST00000438700 ADGRB2O60241 1585 aa18.24■□□□□ 0.51
PTCHD3-201ENST00000438700 PPIP5K1Q6PFW1 1433 aa18.23■□□□□ 0.51
PTCHD3-201ENST00000438700 ANKRD26Q9UPS8 1709 aa18.23■□□□□ 0.51
PTCHD3-201ENST00000438700 KIF20BQ96Q89 1820 aa18.22■□□□□ 0.51
PTCHD3-201ENST00000438700 NUDT16Q96DE0 195 aaKnown RBP18.22■□□□□ 0.51
PTCHD3-201ENST00000438700 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
PTCHD3-201ENST00000438700 POLR3AO14802 1390 aaPredicted RBP18.22■□□□□ 0.51
PTCHD3-201ENST00000438700 PTCH1Q13635 1447 aa18.21■□□□□ 0.51
PTCHD3-201ENST00000438700 NCKAP5LQ9HCH0 1330 aa18.21■□□□□ 0.51
PTCHD3-201ENST00000438700 XRN1Q8IZH2 1706 aaKnown RBP18.21■□□□□ 0.51
PTCHD3-201ENST00000438700 FYB1O15117 783 aa18.2■□□□□ 0.5
PTCHD3-201ENST00000438700 ANKLE2Q86XL3 938 aa18.2■□□□□ 0.5
PTCHD3-201ENST00000438700 DUSP27Q5VZP5 1158 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 SHPRHQ149N8 1683 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 PRR36Q9H6K5 1346 aa18.19■□□□□ 0.5
PTCHD3-201ENST00000438700 CDC42BPGQ6DT37 1551 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms