RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 ADGRL3Q9HAR2 1447 aa25.9■■□□□ 1.74
HDAC6-208ENST00000438518 TMEM94Q12767 1356 aa25.9■■□□□ 1.74
HDAC6-208ENST00000438518 PLEKHH1Q9ULM0 1364 aa25.89■■□□□ 1.74
HDAC6-208ENST00000438518 DCCP43146 1447 aa25.88■■□□□ 1.73
HDAC6-208ENST00000438518 CDC42BPGQ6DT37 1551 aa25.88■■□□□ 1.73
HDAC6-208ENST00000438518 WAPLQ7Z5K2 1190 aa25.88■■□□□ 1.73
HDAC6-208ENST00000438518 ST20-MTHFSA0A0A6YYL1 179 aa25.86■■□□□ 1.73
HDAC6-208ENST00000438518 MSH6P52701 1360 aa25.84■■□□□ 1.73
HDAC6-208ENST00000438518 HSPA5P11021 654 aaKnown RBP25.83■■□□□ 1.73
HDAC6-208ENST00000438518 C19orf44Q9H6X5 657 aa25.83■■□□□ 1.73
HDAC6-208ENST00000438518 C14orf37Q86TY3 774 aa25.82■■□□□ 1.72
HDAC6-208ENST00000438518 FMN2Q9NZ56 1722 aa25.8■■□□□ 1.72
HDAC6-208ENST00000438518 SAFB2Q14151 953 aaKnown RBP eCLIP25.8■■□□□ 1.72
HDAC6-208ENST00000438518 TESK2Q96S53 571 aa25.8■■□□□ 1.72
HDAC6-208ENST00000438518 EVC2Q86UK5 1308 aa25.78■■□□□ 1.72
HDAC6-208ENST00000438518 MINK1Q8N4C8 1332 aaPredicted RBP25.78■■□□□ 1.72
HDAC6-208ENST00000438518 TULP4Q9NRJ4 1543 aa25.78■■□□□ 1.72
HDAC6-208ENST00000438518 TMF1P82094 1093 aa25.77■■□□□ 1.72
HDAC6-208ENST00000438518 CADPS2Q86UW7 1296 aa25.76■■□□□ 1.71
HDAC6-208ENST00000438518 WASLO00401 505 aaPredicted RBP25.75■■□□□ 1.71
HDAC6-208ENST00000438518 CDCA8Q53HL2 280 aa25.75■■□□□ 1.71
HDAC6-208ENST00000438518 RBM33Q96EV2 1170 aaKnown RBP25.75■■□□□ 1.71
HDAC6-208ENST00000438518 PUS7Q96PZ0 661 aaKnown RBP25.75■■□□□ 1.71
HDAC6-208ENST00000438518 ITSN1Q15811 1721 aa25.74■■□□□ 1.71
HDAC6-208ENST00000438518 ANKARQ7Z5J8 1434 aa25.73■■□□□ 1.71
HDAC6-208ENST00000438518 ATF3P18847 181 aa25.73■■□□□ 1.71
HDAC6-208ENST00000438518 CERKQ8TCT0 537 aa25.72■■□□□ 1.71
HDAC6-208ENST00000438518 HIRIP3Q9BW71 556 aaPredicted RBP25.72■■□□□ 1.71
HDAC6-208ENST00000438518 CDK19Q9BWU1 502 aa25.69■■□□□ 1.7
HDAC6-208ENST00000438518 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
HDAC6-208ENST00000438518 USP32Q8NFA0 1604 aa25.68■■□□□ 1.7
HDAC6-208ENST00000438518 TOPAZ1Q8N9V7 1692 aa25.68■■□□□ 1.7
HDAC6-208ENST00000438518 ATP7BP35670 1465 aa25.67■■□□□ 1.7
HDAC6-208ENST00000438518 MST1RQ04912 1400 aa25.67■■□□□ 1.7
HDAC6-208ENST00000438518 DISP3Q9P2K9 1392 aa25.67■■□□□ 1.7
HDAC6-208ENST00000438518 SRPK2P78362 688 aaKnown RBP25.66■■□□□ 1.7
HDAC6-208ENST00000438518 KIF1AQ12756 1690 aa25.64■■□□□ 1.7
HDAC6-208ENST00000438518 NINLQ9Y2I6 1382 aa25.64■■□□□ 1.69
HDAC6-208ENST00000438518 RGPD8O14715 1765 aaPredicted RBP25.64■■□□□ 1.69
HDAC6-208ENST00000438518 C1orf167Q5SNV9 1468 aa25.63■■□□□ 1.69
HDAC6-208ENST00000438518 TOM1O60784 492 aa25.62■■□□□ 1.69
HDAC6-208ENST00000438518 NUDT16Q96DE0 195 aaKnown RBP25.6■■□□□ 1.69
HDAC6-208ENST00000438518 CABP2Q9NPB3 220 aa25.6■■□□□ 1.69
HDAC6-208ENST00000438518 CCDC61Q9Y6R9 512 aa25.6■■□□□ 1.69
HDAC6-208ENST00000438518 SLAIN2Q9P270 581 aa25.58■■□□□ 1.69
HDAC6-208ENST00000438518 PRR36Q9H6K5 1346 aa25.58■■□□□ 1.69
HDAC6-208ENST00000438518 MYOM1P52179 1685 aa25.58■■□□□ 1.68
HDAC6-208ENST00000438518 PPIP5K1Q6PFW1 1433 aa25.56■■□□□ 1.68
HDAC6-208ENST00000438518 CCDC7Q96M83 1385 aa25.56■■□□□ 1.68
HDAC6-208ENST00000438518 KIF7Q2M1P5 1343 aa25.55■■□□□ 1.68
HDAC6-208ENST00000438518 ROBO1Q9Y6N7 1651 aa25.53■■□□□ 1.68
HDAC6-208ENST00000438518 NUTM2FA1L443 756 aa25.53■■□□□ 1.68
HDAC6-208ENST00000438518 PLEKHG3A1L390 1219 aa25.52■■□□□ 1.68
HDAC6-208ENST00000438518 C11orf95C9JLR9 678 aaPredicted RBP25.52■■□□□ 1.68
HDAC6-208ENST00000438518 UBAP1LF5GYI3 381 aa25.52■■□□□ 1.68
HDAC6-208ENST00000438518 ESCO1Q5FWF5 840 aa25.52■■□□□ 1.68
HDAC6-208ENST00000438518 AKAP12Q02952 1782 aa25.51■■□□□ 1.67
HDAC6-208ENST00000438518 ZNF316A6NFI3 1004 aaPredicted RBP25.51■■□□□ 1.67
HDAC6-208ENST00000438518 PHF8Q9UPP1 1060 aa25.51■■□□□ 1.67
HDAC6-208ENST00000438518 WASHC2AQ641Q2 1341 aa25.51■■□□□ 1.67
HDAC6-208ENST00000438518 NHSL1Q5SYE7 1610 aa25.51■■□□□ 1.67
HDAC6-208ENST00000438518 POLR3AO14802 1390 aaPredicted RBP25.5■■□□□ 1.67
HDAC6-208ENST00000438518 BRINP3Q76B58 766 aa25.48■■□□□ 1.67
HDAC6-208ENST00000438518 MON2Q7Z3U7 1717 aa25.47■■□□□ 1.67
HDAC6-208ENST00000438518 ORAI2Q96SN7 254 aa25.47■■□□□ 1.67
HDAC6-208ENST00000438518 CABP1Q9NZU7 370 aa25.47■■□□□ 1.67
HDAC6-208ENST00000438518 BRD4O60885 1362 aaPredicted RBP25.46■■□□□ 1.67
HDAC6-208ENST00000438518 ANKRD36BQ8N2N9 1353 aa25.46■■□□□ 1.67
HDAC6-208ENST00000438518 AHDC1Q5TGY3 1603 aaPredicted RBP25.46■■□□□ 1.67
HDAC6-208ENST00000438518 TMC1Q8TDI8 760 aa25.46■■□□□ 1.67
HDAC6-208ENST00000438518 POLR3GLQ9BT43 218 aa25.46■■□□□ 1.67
HDAC6-208ENST00000438518 ZNF692Q9BU19 519 aaPredicted RBP25.46■■□□□ 1.67
HDAC6-208ENST00000438518 TERF2IPQ9NYB0 399 aa25.46■■□□□ 1.67
HDAC6-208ENST00000438518 CPSF1Q10570 1443 aaKnown RBP25.46■■□□□ 1.67
HDAC6-208ENST00000438518 NPHP3Q7Z494 1330 aa25.45■■□□□ 1.66
HDAC6-208ENST00000438518 HDGFL2Q7Z4V5 671 aaPredicted RBP25.44■■□□□ 1.66
HDAC6-208ENST00000438518 CD163L1Q9NR16 1453 aa25.44■■□□□ 1.66
HDAC6-208ENST00000438518 ACEP12821 1306 aa25.43■■□□□ 1.66
HDAC6-208ENST00000438518 NGDNQ8NEJ9 315 aaKnown RBP25.43■■□□□ 1.66
HDAC6-208ENST00000438518 PMFBP1Q8TBY8 1022 aa25.42■■□□□ 1.66
HDAC6-208ENST00000438518 SLC12A5Q9H2X9 1139 aa25.42■■□□□ 1.66
HDAC6-208ENST00000438518 NRKQ7Z2Y5 1582 aa25.41■■□□□ 1.66
HDAC6-208ENST00000438518 A0A1W2PP64 1363 aa25.4■■□□□ 1.66
HDAC6-208ENST00000438518 USP6P35125 1406 aa25.39■■□□□ 1.66
HDAC6-208ENST00000438518 PIP4K2BP78356 416 aa25.38■■□□□ 1.65
HDAC6-208ENST00000438518 KTN1Q86UP2 1357 aaKnown RBP25.38■■□□□ 1.65
HDAC6-208ENST00000438518 PXDNQ92626 1479 aa25.38■■□□□ 1.65
HDAC6-208ENST00000438518 PHLPP1O60346 1717 aa25.37■■□□□ 1.65
HDAC6-208ENST00000438518 TRPM3Q9HCF6 1732 aaPredicted RBP25.37■■□□□ 1.65
HDAC6-208ENST00000438518 FOXO3O43524 673 aa25.37■■□□□ 1.65
HDAC6-208ENST00000438518 PSME1Q06323 249 aa25.37■■□□□ 1.65
HDAC6-208ENST00000438518 EDC4Q6P2E9 1401 aaKnown RBP25.37■■□□□ 1.65
HDAC6-208ENST00000438518 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
HDAC6-208ENST00000438518 SOS2Q07890 1332 aaPredicted RBP25.35■■□□□ 1.65
HDAC6-208ENST00000438518 SBNO1A3KN83 1393 aa25.34■■□□□ 1.65
HDAC6-208ENST00000438518 SSH2Q76I76 1423 aa25.34■■□□□ 1.65
HDAC6-208ENST00000438518 COL16A1Q07092 1604 aaPredicted RBP25.33■■□□□ 1.65
HDAC6-208ENST00000438518 KRT28Q7Z3Y7 464 aa25.32■■□□□ 1.64
HDAC6-208ENST00000438518 PANK3Q9H999 370 aa25.32■■□□□ 1.64
HDAC6-208ENST00000438518 TTC21AQ8NDW8 1320 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms