RNA–Protein interactions for RNA: ENST00000438412.5

HCG18-236, Transcript of HLA complex group 18, humanhuman

TSL 2 BASIC

Gene HCG18, Length 2,440 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-236ENST00000438412 RPGRIP1LQ68CZ1 1315 aa16.74■□□□□ 0.27
HCG18-236ENST00000438412 PREX1Q8TCU6 1659 aa16.73■□□□□ 0.27
HCG18-236ENST00000438412 FANCIQ9NVI1 1328 aa16.73■□□□□ 0.27
HCG18-236ENST00000438412 DIP2BQ9P265 1576 aa16.72■□□□□ 0.27
HCG18-236ENST00000438412 INSRP06213 1382 aa16.72■□□□□ 0.27
HCG18-236ENST00000438412 BCAR3O75815 825 aa16.71■□□□□ 0.27
HCG18-236ENST00000438412 MTHFSP49914 203 aa16.71■□□□□ 0.27
HCG18-236ENST00000438412 SRPK2P78362 688 aaKnown RBP16.71■□□□□ 0.27
HCG18-236ENST00000438412 SLFN5Q08AF3 891 aa16.71■□□□□ 0.27
HCG18-236ENST00000438412 PRAM1Q96QH2 718 aa16.71■□□□□ 0.27
HCG18-236ENST00000438412 TMEM131LA2VDJ0 1609 aa16.7■□□□□ 0.26
HCG18-236ENST00000438412 ARHGAP31Q2M1Z3 1444 aa16.7■□□□□ 0.26
HCG18-236ENST00000438412 STAG3Q9UJ98 1225 aa16.69■□□□□ 0.26
HCG18-236ENST00000438412 EVC2Q86UK5 1308 aa16.69■□□□□ 0.26
HCG18-236ENST00000438412 SHPRHQ149N8 1683 aa16.69■□□□□ 0.26
HCG18-236ENST00000438412 GGNBP2Q9H3C7 697 aa16.69■□□□□ 0.26
HCG18-236ENST00000438412 SLC52A1Q9NWF4 448 aa16.68■□□□□ 0.26
HCG18-236ENST00000438412 FBLN1P23142 703 aa16.67■□□□□ 0.26
HCG18-236ENST00000438412 A0A1W2PP64 1363 aa16.67■□□□□ 0.26
HCG18-236ENST00000438412 WAPLQ7Z5K2 1190 aa16.66■□□□□ 0.26
HCG18-236ENST00000438412 CLTCQ00610 1675 aaKnown RBP16.66■□□□□ 0.26
HCG18-236ENST00000438412 CGNL1Q0VF96 1302 aa16.66■□□□□ 0.26
HCG18-236ENST00000438412 SLC24A1O60721 1099 aa16.65■□□□□ 0.26
HCG18-236ENST00000438412 PAK3O75914 559 aaPredicted RBP16.65■□□□□ 0.26
HCG18-236ENST00000438412 NPM2Q86SE8 214 aaKnown RBP16.65■□□□□ 0.26
HCG18-236ENST00000438412 POGKQ9P215 609 aa16.65■□□□□ 0.26
HCG18-236ENST00000438412 POLR3AO14802 1390 aaPredicted RBP16.65■□□□□ 0.26
HCG18-236ENST00000438412 PTPRMP28827 1452 aa16.65■□□□□ 0.26
HCG18-236ENST00000438412 WWC1Q8IX03 1113 aa16.65■□□□□ 0.26
HCG18-236ENST00000438412 TRMT2AQ8IZ69 625 aaKnown RBP16.64■□□□□ 0.25
HCG18-236ENST00000438412 TCP11L2Q8N4U5 519 aa16.63■□□□□ 0.25
HCG18-236ENST00000438412 ANKRD36BQ8N2N9 1353 aa16.63■□□□□ 0.25
HCG18-236ENST00000438412 YTHDC2Q9H6S0 1430 aaKnown RBP16.63■□□□□ 0.25
HCG18-236ENST00000438412 BCL2L13Q9BXK5 485 aa16.62■□□□□ 0.25
HCG18-236ENST00000438412 TNNQ9UQP3 1299 aa16.61■□□□□ 0.25
HCG18-236ENST00000438412 NKTRP30414 1462 aaKnown RBP16.61■□□□□ 0.25
HCG18-236ENST00000438412 U2AF1L5P0DN76 240 aaPredicted RBP16.6■□□□□ 0.25
HCG18-236ENST00000438412 U2AF1Q01081 240 aaKnown RBP eCLIP16.6■□□□□ 0.25
HCG18-236ENST00000438412 ALKQ9UM73 1620 aa16.6■□□□□ 0.25
HCG18-236ENST00000438412 CDK19Q9BWU1 502 aa16.59■□□□□ 0.25
HCG18-236ENST00000438412 CABP1Q9NZU7 370 aa16.59■□□□□ 0.25
HCG18-236ENST00000438412 NCKAP5LQ9HCH0 1330 aa16.59■□□□□ 0.25
HCG18-236ENST00000438412 ERICH6Q7L0X2 663 aa16.59■□□□□ 0.25
HCG18-236ENST00000438412 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.59■□□□□ 0.251e-6■■■■□ 21.3
HCG18-236ENST00000438412 CD163L1Q9NR16 1453 aa16.58■□□□□ 0.25
HCG18-236ENST00000438412 E9PSI1 815 aa16.58■□□□□ 0.25
HCG18-236ENST00000438412 U2SURPO15042 1029 aaKnown RBP16.58■□□□□ 0.25
HCG18-236ENST00000438412 PLPPR3Q6T4P5 718 aa16.58■□□□□ 0.25
HCG18-236ENST00000438412 ZFYVE9O95405 1425 aa16.58■□□□□ 0.24
HCG18-236ENST00000438412 PANK1Q8TE04 598 aa16.58■□□□□ 0.24
HCG18-236ENST00000438412 FYB1O15117 783 aa16.57■□□□□ 0.24
HCG18-236ENST00000438412 PDE4AP27815 886 aa16.57■□□□□ 0.24
HCG18-236ENST00000438412 RUNDC1Q96C34 613 aa16.57■□□□□ 0.24
HCG18-236ENST00000438412 FRAT1Q92837 279 aaPredicted RBP16.57■□□□□ 0.24
HCG18-236ENST00000438412 A2ML1A8K2U0 1454 aa16.56■□□□□ 0.24
HCG18-236ENST00000438412 IQSEC2Q5JU85 1478 aa16.56■□□□□ 0.24
HCG18-236ENST00000438412 USP32Q8NFA0 1604 aa16.55■□□□□ 0.24
HCG18-236ENST00000438412 KDM2BQ8NHM5 1336 aa16.55■□□□□ 0.24
HCG18-236ENST00000438412 ABCC11Q96J66 1382 aa16.55■□□□□ 0.24
HCG18-236ENST00000438412 PPM1GO15355 546 aaPredicted RBP16.55■□□□□ 0.24
HCG18-236ENST00000438412 COG6Q9Y2V7 657 aa16.54■□□□□ 0.24
HCG18-236ENST00000438412 TXNDC2Q86VQ3 553 aa16.54■□□□□ 0.24
HCG18-236ENST00000438412 TSR2Q969E8 191 aaKnown RBP16.54■□□□□ 0.24
HCG18-236ENST00000438412 RIMS2Q9UQ26 1411 aa16.54■□□□□ 0.24
HCG18-236ENST00000438412 KIF13AQ9H1H9 1805 aa16.53■□□□□ 0.24
HCG18-236ENST00000438412 CFAP53Q96M91 514 aa16.53■□□□□ 0.24
HCG18-236ENST00000438412 ZRANB1Q9UGI0 708 aa16.53■□□□□ 0.24
HCG18-236ENST00000438412 TCERG1O14776 1098 aaKnown RBP16.53■□□□□ 0.24
HCG18-236ENST00000438412 METP08581 1390 aa16.52■□□□□ 0.24
HCG18-236ENST00000438412 RGS3P49796 1198 aa16.52■□□□□ 0.24
HCG18-236ENST00000438412 NOP58Q9Y2X3 529 aaKnown RBP16.52■□□□□ 0.24
HCG18-236ENST00000438412 NLRP1Q9C000 1473 aa16.52■□□□□ 0.23
HCG18-236ENST00000438412 ARHGEF40Q8TER5 1519 aa16.52■□□□□ 0.23
HCG18-236ENST00000438412 CANXP27824 592 aaKnown RBP16.51■□□□□ 0.23
HCG18-236ENST00000438412 CLUAP1Q96AJ1 413 aa16.51■□□□□ 0.23
HCG18-236ENST00000438412 BACH2Q9BYV9 841 aa16.51■□□□□ 0.23
HCG18-236ENST00000438412 RLBP1P12271 317 aa16.51■□□□□ 0.23
HCG18-236ENST00000438412 ANP32AP39687 249 aaKnown RBP16.51■□□□□ 0.23
HCG18-236ENST00000438412 IGHDP01880 384 aa16.5■□□□□ 0.23
HCG18-236ENST00000438412 NBR1Q14596 966 aa16.5■□□□□ 0.23
HCG18-236ENST00000438412 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.5■□□□□ 0.23
HCG18-236ENST00000438412 NUTM2FA1L443 756 aa16.49■□□□□ 0.23
HCG18-236ENST00000438412 PHF23Q9BUL5 403 aaPredicted RBP16.49■□□□□ 0.23
HCG18-236ENST00000438412 TERF2IPQ9NYB0 399 aa16.49■□□□□ 0.23
HCG18-236ENST00000438412 SPATA31D1Q6ZQQ2 1576 aa16.49■□□□□ 0.23
HCG18-236ENST00000438412 ZMYM3Q14202 1370 aa16.49■□□□□ 0.23
HCG18-236ENST00000438412 ATAD2Q6PL18 1390 aa16.49■□□□□ 0.23
HCG18-236ENST00000438412 CEBPAP49715 358 aaPredicted RBP16.49■□□□□ 0.23
HCG18-236ENST00000438412 RARSP54136 660 aaKnown RBP16.48■□□□□ 0.23
HCG18-236ENST00000438412 IPO9Q96P70 1041 aaKnown RBP16.48■□□□□ 0.23
HCG18-236ENST00000438412 SETD1AO15047 1707 aaKnown RBP16.48■□□□□ 0.23
HCG18-236ENST00000438412 PUS7Q96PZ0 661 aaKnown RBP16.48■□□□□ 0.23
HCG18-236ENST00000438412 AGLP35573 1532 aa16.48■□□□□ 0.23
HCG18-236ENST00000438412 NRXN3Q9Y4C0 1643 aa16.47■□□□□ 0.23
HCG18-236ENST00000438412 COL3A1P02461 1466 aaPredicted RBP16.47■□□□□ 0.23
HCG18-236ENST00000438412 NSD2O96028 1365 aa16.47■□□□□ 0.23
HCG18-236ENST00000438412 PLEKHF1Q96S99 279 aa16.47■□□□□ 0.23
HCG18-236ENST00000438412 ESF1Q9H501 851 aaKnown RBP16.47■□□□□ 0.23
HCG18-236ENST00000438412 HDGFL2Q7Z4V5 671 aaPredicted RBP16.46■□□□□ 0.23
HCG18-236ENST00000438412 MYT1Q01538 1121 aa16.46■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms